Acetivibrio thermocellus DSM 1313: Clo1313_2993
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Entry
Clo1313_2993 CDS
T01933
Name
(GenBank) multi-sensor signal transduction histidine kinase
KO
K07652
two-component system, OmpR family, sensor histidine kinase VicK [EC:
2.7.13.3
]
Organism
ctx
Acetivibrio thermocellus DSM 1313
Pathway
ctx02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ctx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Clo1313_2993
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ctx01001
]
Clo1313_2993
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ctx02022
]
Clo1313_2993
Enzymes [BR:
ctx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
Clo1313_2993
Protein kinases [BR:
ctx01001
]
Histidine kinases
OmpR family
Clo1313_2993
Two-component system [BR:
ctx02022
]
OmpR family
VicK-VicR (cell wall metabolism)
Clo1313_2993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
HAMP
PAS_8
PAS
PAS_9
DUF7260
Motif
Other DBs
NCBI-ProteinID:
ADU75971
LinkDB
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Position
complement(3505858..3507660)
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AA seq
600 aa
AA seq
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MILKRLQFLTSLQWRLVTIFILLALVLAVSASVSLNYFVELFFYDTFKAGIENGFEYWGI
DDEDQPTKEEIVSFLTANNKANAMSLFFINNFRTFTIIDKNTNEIIYTDVKSPYRETLRE
DIIQSRNYLAALAGGKGDKGKLIRIGDKSFFDYARRIGNTDYILYFRYDREEWAGAIEAF
NDIIKLSFLIAVILSLIFGYALSKTITVPIVNLMHKAREMAAGHFGQVMEVKSDDEIGKL
TKAFNFMSRELRKTLNQISREKSKIETILNYMTDGVIAFNINGEVIHINPVAKAILGIEK
CDFDFNEFSKRYNLDVSIEEVKYLEIYNAKEVSTNIGEKYVKIYFALFTDEENNADGVIA
VLHDITEQQKLENMRKEFVANVSHELRTPLTSIKSYAETLLDGALEDRELAGKFLSVINS
EADRMTRLVKDLLQLSRLDNNQMKWDMQKISFEDLVRNCVEKVKFESEEKNQTLECFTIG
EELEIVADKDRMEQVVLNILTNAIKYTPEGGKITVYIGRMYSEVYVKVVDSGIGIPREDL
GRIFERFYRTDKARSREMGGTGLGLAIAKEIVEAHKGSISVASEPGKGTEVTVKLPAACN
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgattttgaagcgtttgcagtttctgacaagtcttcagtggcggcttgtaactattttc
atacttttggcattggtgttggcggtgtcggcaagtgtctcgctaaattattttgtggaa
ttgtttttttatgacacctttaaagcgggaatagagaatggttttgagtattggggcata
gatgatgaggaccagccgacaaaagaagaaattgtttcgtttcttacggctaacaacaaa
gcaaatgcaatgtccctgttttttataaacaatttcagaacatttaccataattgacaag
aacaccaatgaaataatatacaccgatgtaaagtctccttacagggaaacactgagggag
gatattatacagtcaagaaactatcttgccgcactggcgggaggtaaaggagacaaggga
aaattaatcagaatcggggacaagtccttttttgactatgcaagacgaattggcaatacg
gattatattttatacttcaggtatgaccgggaagagtgggccggagcaatagaagctttt
aatgatataataaagctgagttttctgattgctgttatattgtcattgatttttggatat
gcactgtcgaaaacgataaccgtcccgattgtcaatctcatgcacaaggccagggaaatg
gcggcggggcatttcggacaggtaatggaggttaaatccgacgatgaaataggaaagctt
acaaaagctttcaacttcatgagcagggagcttaggaaaactttaaaccagatatcgagg
gaaaaaagcaagattgagactattcttaactatatgaccgacggtgtgattgcgtttaac
ataaatggtgaggtaattcacataaatcctgtggcaaaagcaatattgggaattgaaaag
tgcgattttgatttcaacgagttttcgaaaagatataatttagatgtttcgatagaagag
gtcaaataccttgaaatatacaacgcaaaggaagtaagtaccaatataggcgaaaaatac
gtcaaaatatattttgctctttttactgacgaggaaaacaatgctgacggcgtaattgcc
gtgcttcacgatataaccgaacagcaaaagcttgaaaacatgcgcaaggagtttgttgca
aatgtgtcccatgaactaaggacacctctgacttctatcaagagctatgccgagacactt
ctggacggagctttggaggacagggaacttgccgggaaattcttaagtgttattaattcg
gaagccgacagaatgacaaggcttgtaaaagatctgctccagctttcaaggctcgacaac
aatcaaatgaagtgggatatgcagaaaatatcctttgaagacttggtaagaaactgcgtg
gaaaaagttaaatttgaatctgaagagaaaaatcagacgctggagtgttttaccataggg
gaggaactggagattgttgccgacaaagaccgcatggagcaagtggttttgaatattctt
accaatgccataaagtatactcctgaaggaggcaaaattacagtttatattggaagaatg
tacagcgaggtttatgtaaaagtggtcgactcaggtataggaattccaagggaggatctt
ggcagaatatttgaaagattctacaggacggacaaggcccgttcaagagaaatgggcggt
acaggtcttggattggcaattgcaaaagaaatcgtggaagctcataaaggctcgatatct
gtcgcaagtgagcctggaaaaggtacggaagttaccgtgaagctgccggcggcgtgtaac
tga
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