Clostridium tyrobutyricum: CTK_C07190
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Entry
CTK_C07190 CDS
T04331
Symbol
addB
Name
(GenBank) ATP-dependent helicase/deoxyribonuclease subunit
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
ctyk
Clostridium tyrobutyricum
Brite
KEGG Orthology (KO) [BR:
ctyk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctyk03400
]
CTK_C07190 (addB)
Enzymes [BR:
ctyk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CTK_C07190 (addB)
DNA repair and recombination proteins [BR:
ctyk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CTK_C07190 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
ATPase_2
Bac_DnaA
Motif
Other DBs
NCBI-ProteinID:
AND83980
LinkDB
All DBs
Position
733729..737166
Genome browser
AA seq
1145 aa
AA seq
DB search
MGVKFIYGKSGSGKSHYCLQSIKKRIEDNSTNSLILLVPEQFSFQSEKNLIEFAGERSIL
KAQVLSFRRMADHILDEVGGGINRHINDSGKNILIYKIIEENRDNLKVFKKTSRNQGLVS
NMSNTIKELKKYNITADILRGSLDGIENVSLRSKLEDIIVIFSEFQDRLSRAYIDEEDML
SMLAEKLDESKMFSGAEVWVDEFSSFTPQEYTILEKLMRKSSKVNFTLCMDFNDNTGTDL
FLPTKLTEKKLLELCEKNNISYEKPVVLNSSPCYKFKDNKELQHLEHYLFSYPYAEYKYN
TNNINIFKALNKYTEVSNTANDIIRICRDKKFRFKDVAVVTGDLDGYESIVKAVFNQYDI
PYFIDKRRSIDSNPIIVLIISVVEIISKNWSYESVFRYLKTGLLDIELSDIDILENYVLQ
NGIKGSVWLKEEPWKFKTIYSINEDKENSYMEEFVEKINSIRDRVREPIIRLSQSIKGRK
NGEDKCRGLYEFLCDIKIPEKVENIIGKFQQESKLDIANEYSQIWDIVVDTLDQIVDTIG
KDSFSLDTFAQVLTSGFKEYEIGVIPPALDQVLVGNVTRIRSHDVRALYIIGVNDGVFPS
TIPSNGVITDADREELKERGIEISENARTKAFEEQFLMYTTLTIMDRYIRLSYSMGDDNG
KTKRPSIIISRIKKLFPALIEESDVMDQKKFNDINNISVPSGTFNGLIENITKNISSEKL
ENSIWIDVYRWYSTNKNWNTKLNNVLKGFYYTNEAEITDTSKVRKLYGRHMNMSVSKLEK
FVQCPFAYFVQYGLKAKQRKIYNLSPPDLGSFMHSMLEIFSKKLREENLTWRDIDRKWCS
EKVSEIIKTTLDNRGESILNSSSRYRHVTRRINRVITRAVWLITEHIKKSKFNPAGYEVS
FGNHGDFPPISVKLHSSEDIELVGRVDRIDIMEKDGISYLRVIDYKSGVKEFNISDLYYG
LQIQLLVYLDVILDELESKMNKAAIPGGILYFKLDDPIVNGKGNITYNEIEKNIMKSLRM
NGLLLDDADIIKDMDNEISGPSNIIPASLKKDGNISSSKSSVATMNQFSILRKYVRKLMA
ELCERILEGDIEVCPYKDNVRKGCDFCLYSSICQFDTLIKGSRYNNFEKKSTVEIWKEIE
QSVNN
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtaaaattcatatatggcaagtcgggaagtggaaaaagccattattgtcttcag
agtataaagaaaaggattgaagataattctactaattctcttatacttttggtaccagag
cagttttcatttcaatcagaaaaaaatttaatagaatttgcaggtgagagatcaatactt
aaggcacaggtattgagtttcagaagaatggcagatcatattctagatgaagtaggcgga
ggtataaacaggcatataaatgattcgggaaaaaatattctcatatataaaataatagaa
gaaaatagggataatcttaaggtattcaaaaaaacttctcgaaatcagggcttggtatca
aatatgtccaatactataaaggaactgaaaaaatataatataactgccgatatattgagg
ggaagtttagatggaatagaaaatgttagtttaagaagtaaactggaagatataatagta
atattttcagagttccaggatagattgagcagggcatatatagatgaagaggatatgttg
agtatgcttgctgaaaagttggatgagtctaagatgttttctggagcagaagtatgggta
gatgaattctcaagttttacacctcaagaatatacaatcttagaaaagctcatgagaaag
tccagtaaagtcaatttcacattgtgtatggatttcaatgataacacaggcacagatctt
tttctccctaccaaacttacggaaaaaaagcttcttgaattgtgtgaaaaaaataatata
tcttatgaaaaaccagttgtactaaatagcagcccatgttataaattcaaagataataaa
gaacttcaacatttagagcattatttattttcttatccttatgctgaatataaatataat
accaataatataaatatatttaaggcattgaacaagtatacagaagtaagcaacactgcc
aatgatataattagaatatgcagagacaagaagtttagatttaaggatgttgcagtagta
accggcgatcttgatggatatgaaagtatagtaaaggcagtattcaatcaatacgacata
ccgtactttatagataagagaagaagtattgacagtaatccaattatagttctaataatt
tctgttgtagaaataatatcaaaaaactggtcttatgaatctgtgtttagatacttgaaa
accgggcttcttgatatagaactgtcggatatagatatacttgaaaactatgttctccaa
aatggaataaagggttctgtttggcttaaggaggaaccatggaaattcaaaaccatatac
agtataaatgaggataaagagaattcttacatggaagagtttgtggaaaaaataaattca
ataagagatagggtaagagagccaattataagactgtcacagtcaatcaagggaagaaaa
aatggagaggataagtgcagggggctttatgaatttctatgtgatattaaaatacctgaa
aaagttgaaaatattataggaaaatttcagcaggaatccaaacttgatatagcaaatgaa
tacagccagatatgggatatagttgtggatacacttgatcaaatagtagatacaataggt
aaggacagctttagtttggatacatttgcacaggttttgacttcaggatttaaagagtat
gaaataggtgtaataccacctgcacttgaccaggttctagttggaaatgtaacaagaatt
agaagccatgatgttagagctctttatataataggtgttaatgatggagtgtttccatct
accataccatccaatggggtaattacagatgcggacagggaagaattaaaagagagaggt
atagaaatttctgaaaatgcaaggactaaagcttttgaagaacaatttttgatgtataca
actttaactataatggatagatacattaggcttagttattccatgggtgatgacaatgga
aagactaaaagaccttctattataatttccagaataaaaaaattatttccagctctaata
gaagaaagcgatgtaatggatcagaaaaaatttaatgatataaacaatataagcgtgcca
agtggtacatttaatggacttatagaaaacattactaaaaatatttcaagtgaaaaatta
gaaaattctatctggatagatgtatacagatggtatagcactaataaaaattggaacaca
aaattaaataatgtactgaagggattctattatacaaatgaagctgaaattacggatacc
tcaaaggttaggaaactttacggaaggcatatgaatatgagtgtttcaaaacttgaaaag
tttgtacagtgtccttttgcatattttgtacaatatggattaaaagccaaacagagaaaa
atatataacctgagccctcctgatcttggaagttttatgcacagtatgctggagatattt
tctaaaaaattgagagaagaaaatttaacgtggagggatatagaccgaaagtggtgcagt
gaaaaggtatctgaaattattaaaactactttggataacaggggtgaatccatattaaat
agttcaagtagatacagacatgttacaaggagaataaatagggtaattacaagagcagta
tggcttataacagaacatataaagaagagtaaatttaatcctgcaggttatgaagtgtca
tttggaaatcatggagattttcctccaatttcagtaaagttacattctagtgaagatatt
gaacttgtaggaagagttgatagaatagatataatggaaaaggatggaataagctatctt
agagtaatagattataaatctggagtaaaagaattcaatatttcggatttatactatgga
cttcaaatacaacttctggtatatttggatgtaatacttgatgagcttgaatctaaaatg
aataaggcagctattccaggtggcatattatactttaaactggatgatcctatagtaaac
ggaaaaggcaatattacctataatgaaatagaaaagaatataatgaagagccttaggatg
aatggattgcttttagacgatgctgatataataaaagatatggataatgagataagtgga
ccatccaatataatacctgcttctctaaaaaaagatggaaatatttcttctagtaaatct
tctgttgcaacaatgaaccaatttagcattcttagaaaatatgtcagaaaactcatggca
gaactgtgtgaaagaatacttgagggtgatatagaagtatgtccttataaagacaatgtg
agaaaaggatgtgatttctgtctctactcatcaatatgtcaatttgatactttaatcaag
ggaagtaggtataataattttgagaaaaagagtacagtggaaatatggaaggaaatagaa
caatcagttaataattga
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