Clostridium tyrobutyricum: CTK_C08310
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Entry
CTK_C08310 CDS
T04331
Symbol
addA
Name
(GenBank) ATP-dependent helicase/nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
ctyk
Clostridium tyrobutyricum
Brite
KEGG Orthology (KO) [BR:
ctyk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctyk03400
]
CTK_C08310 (addA)
Enzymes [BR:
ctyk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CTK_C08310 (addA)
DNA repair and recombination proteins [BR:
ctyk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CTK_C08310 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_12
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AND84092
LinkDB
All DBs
Position
847361..851026
Genome browser
AA seq
1221 aa
AA seq
DB search
MVANWTDEQRKAIFTERSNVLVAAGAGAGKTAVLVERIIRKITDPDLDIDIDKLLVVTYT
NAAAAEMKERIGDELQKLLEDNFESRRLQRQLTLLNQSNIMTMHSFCLKIIKNNFQLVDL
DPNFRVSDNEESILLKRDAVFELFEEKYDSNDSSFLNLIDSYGDKNDTKVQDIVISLYEF
VQSVPWPEKWLNKASEQFNLSDDFEFETSLWAQIIISDLKVEIKSLRDRLKRALELIFEN
PGFEGYEPIFKNEVGEFEYLLKLKSWNEIDNYVQELKFQRLPRLKSGSYDEDIKIRVTKT
RDNVKKRLKHIMENILNYGDDVDKSIRDMYPVMKCLTDLVMDFANKYADKKRERNILDFS
DIEHFCLNILTRKDKSGDIIPSDTALYYRKYFAEILVDEYQDSNGVQEVIINMINRDDET
SNLFMVGDVKQSIYRFRQAKPELFLEKYRNYSEEENSKNRKIKLFKNFRSRHEIIDGVNY
LFSQIMRKKIGELDYVEGEQLESAATYPDTTDSTFSGEAIEVNLIDKVRSEDEQEDLSNI
QVEGRLIAKKIKDIVNPEDNQYFKVYDKDIRSYRNLMYKDIVILMRATKNWAQTIMEELN
NANIPVFADTSTGYFETIEIKTIMSLLQIIDNPIQDIPLISVLRSPIASFSPEELIDIRI
VNKDVSFYEALNICCNEEDVTEDLKEKISSFLDRMDKWRKKIVYMPIDEFLWYLYSDTGY
YGFVGAMTGGTQRQANLRMLFEKAEQYEKSSYKGLFNFINFVNKLRNSSGDMGSAKILGE
NENVVRIMSIHKSKGLEFPVVILAGAGKNFNFMDANNPIIFNEELGLGPEYVDIERRIHY
PTIIKHILRSKLKNETLSEEMRILYVAFTRAKEKLIITGMINNVEDTFEKWCDDSLVEEN
KVPEYALQNAKNYLEWIGMAIVRHKDGKIIRKIANHKNCKFLPIEHISNWKINIYSREDF
SENSQVDTEIDIIEHIKNRFLDKYEDEYFQEINRRLNWKYKYEEASKIPAKFSVSELKRR
FALIDMEDSSHLVEDVNLKKPNFIKENTELSGAQRGTLMHLAMQHIDINNTDSKSNIDTQ
IENLVLGQFITDDEKKAISSYKILKFFNSNLGIRMKSSKKVYREVPFYIQESSSDIYKDL
PKDLYKDEKILIQGIIDCYFEEDDGLVLIDYKTDYVERTEELKDKYKIQIYYYSKALENM
TGINVKERYIYSFHKGDIIEV
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atggttgcaaattggacagatgaacaaagaaaagctatatttacagaaagatcaaatgta
ttggtggctgcaggagctggtgcaggaaaaactgctgttcttgtagagagaataattcga
aagataacagatccagatttggatattgacatagataaattacttgtagttacatataca
aatgcagctgcagctgaaatgaaggagaggattggagatgaactccaaaaattattggaa
gataattttgaatcgagaagacttcaaagacagctaacactgttaaatcaatccaatata
atgactatgcattctttttgtctcaaaataatcaagaataattttcaattggtagatttg
gatccaaattttagagtctcggacaatgaggagagtatactcttaaaaagagatgctgta
tttgaactatttgaagaaaaatatgattcaaatgatagtagttttttaaatctgatagat
tcttatggtgataaaaatgatactaaagttcaggatattgtaatatcactctatgaattc
gttcaaagtgtcccgtggcctgaaaagtggctcaataaggcatcagagcaatttaattta
tctgatgattttgaatttgaaacatccctttgggcacaaataataatatcagatctaaaa
gttgaaataaagagtcttagagatagacttaaaagagcacttgagttgatatttgaaaat
cctggttttgagggatatgagcctatttttaaaaatgaagtcggtgaatttgaatatttg
ttaaagttaaaatcctggaatgagattgataattatgttcaagaacttaaatttcaaagg
cttccaagattaaaaagtggaagctatgatgaagatataaagataagagtaactaagacg
agagataatgtaaagaaaaggttaaaacatataatggaaaatatattaaactatggagat
gatgtagacaaaagtataagggatatgtatcctgttatgaaatgtcttactgatcttgta
atggattttgctaataaatatgctgataaaaaaagagaaaggaatatacttgactttagt
gatatagagcatttttgtttaaatatactaacccgtaaggataaaagtggagatataatt
ccctcagatacagctctttattatagaaagtattttgcagaaatacttgtagatgagtat
caagatagcaatggggttcaagaagtaataataaatatgataaatagagatgatgaaact
tccaatctgtttatggtaggagatgtaaagcagagcatatatagattcagacaggcaaaa
ccggaattgtttcttgaaaaatataggaactattctgaagaagaaaattctaaaaatagg
aaaataaaattatttaaaaatttcaggagcagacatgaaataatagacggcgtaaattat
ttattcagccagataatgcgtaaaaaaataggagaacttgattatgtagaaggagaacaa
cttgaaagtgcagcaacttatccggatacaactgatagtacttttagtggagaggctata
gaagttaatctaatagataaagtcaggagtgaagatgaacaggaagatttaagtaatatt
caggtagaaggaagattaatagccaaaaaaataaaagacattgtaaatcctgaagataat
caatattttaaggtttatgataaagatataagatcatatagaaatttaatgtataaagac
atagtaatattgatgagagctactaagaattgggctcaaactattatggaagagttgaac
aatgcaaacataccagtttttgcagatacatctacaggctattttgaaactatagaaata
aagactattatgagtcttctgcaaataatagataatccaatacaggatataccgcttata
tccgtactgcgctcaccaatagcatctttttcaccagaagaattgattgacataaggatt
gtaaataaagatgtatctttttacgaagcattaaatatttgctgtaacgaggaagatgta
acagaagatttaaaagaaaaaatcagcagctttttggatcgtatggataaatggagaaaa
aaaatagtatatatgcccatagatgaatttttgtggtatttgtatagtgatactggctat
tatggatttgtgggtgccatgactggaggaactcagagacaggcaaatttgagaatgctt
tttgaaaaagcagaacaatacgaaaaaagcagttataaaggactattcaacttcataaat
tttgtaaataagttgaggaatagcagtggagatatgggaagtgcaaaaatattaggtgaa
aatgaaaatgtagttagaataatgagcatacacaagagtaagggacttgagtttccagtg
gtaatacttgcaggtgcaggtaaaaattttaactttatggatgccaacaatcctataatt
tttaacgaagaattgggacttggccctgagtatgtggatattgaaagacggatacattat
cccactattataaaacatatacttagaagtaaacttaaaaatgagactttgtctgaagaa
atgagaatattatacgtagcatttacaagggcaaaggaaaaattaattataactggaatg
ataaataacgtagaagatacatttgaaaaatggtgtgatgactctcttgtagaggaaaat
aaagtccctgaatatgctttacaaaatgcaaaaaattatcttgaatggataggaatggca
attgtaaggcataaagatggaaaaattataagaaaaattgcaaatcataaaaattgtaaa
tttttgcctatagaacatatttcaaactggaaaatcaatatctattcaagagaagatttc
tcagaaaactctcaagtagatactgaaatagacataatagaacatattaaaaatagattt
ctggataaatatgaagatgaatattttcaagaaataaatagaaggctaaattggaaatat
aaatatgaagaggcatcaaaaatacctgccaaattttcagtatctgaattaaagagaaga
tttgcattgattgatatggaagatagttcacatctggttgaggatgtgaatcttaaaaag
cctaatttcattaaagaaaatacagaattgtcaggagctcaaagaggtactttgatgcat
cttgcaatgcagcatattgatataaataatacagattccaaatcgaatatagatactcaa
atagaaaatcttgtacttggacaatttattacagatgatgaaaaaaaggctatttcatct
tataaaatattgaaatttttcaattcaaatcttgggattagaatgaaaagttcaaagaag
gtatatagggaagtaccattttatatacaggaaagcagttctgatatatataaggatttg
ccaaaggatctatataaagatgaaaagatacttatccagggaataatagattgctatttt
gaagaagatgatggattggtgcttatagattataaaactgattatgttgaaagaactgaa
gaactcaaagataaatataagatacagatttactattactcgaaagcacttgaaaatatg
accggtataaatgtgaaagaaagatacatttattcatttcacaaaggtgatattattgaa
gtatag
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