Clostridium tyrobutyricum: CTK_C08550
Help
Entry
CTK_C08550 CDS
T04331
Name
(GenBank) triple helix repeat-containing collagen
Organism
ctyk
Clostridium tyrobutyricum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
BclA_C
CBM96
TGFb_propeptide
C1q
Disaggr_repeat
Motif
Other DBs
NCBI-ProteinID:
AND84116
LinkDB
All DBs
Position
complement(872671..874563)
Genome browser
AA seq
630 aa
AA seq
DB search
MTTYNAYPTDNVYISEFFPGKNFISSSVLYTGEYTRYKNCPDSYRSLLKFDIPGSIPSKC
KIIKALLYIYVNRKDKDHCSYPSQTVTVYNNLVNFSQNTVTWSNAPNISITLYKTKISNR
DIGHYVKFDITNLVKGWYNNTIANNGLTLVGIEDTPYTIIGYDSSRGTNSPYLSIDYNCD
TPCPICPTGPTGPQGCPGPTGPKGCPGPAGPQGKPGPTGPKGDPGPTGPQGKPGPTGPQG
KPGPTGPKGDPGPTGPQGKPGPTGPKGDLGPTGPKGDLGPTGPKGDPGPTGPQGKPGPTG
PKGDPGPTGPKGDTGPTGPQGKPGPTGPKGDPGPTGPQGKPGPTGPKGDPGPTGPQGDPG
PTGPKGDPGPTGPKGDPGPTGPKGDPGPTGPKGDPGPTGPKGDPGPTGPQGKPGPTGPKG
DPGPTGPQGKPGPTGPKGDPGPTGPQGKPGPTGPKGDTGPTGPKGCPGPTGPKGCPGPTG
PKGCPGPTGPKGDPGSNCSAFGFGTNICTNNINICSNKTLLSFPNDIQLKNVKLNNDNNV
FTIKKRGYYFIEYNINCITDIEISSRLLINKLPVSASQRTTKNNNCNLLSNLIIKLNADD
TLSLQLFKKDNSCNRMSYIKNASITIIKLD
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgactacttataatgcttatccaactgataatgtgtatatatcagaatttttcccaggc
aaaaattttatttcatcttcagttttatatacaggcgaatacacaagatataagaactgc
ccggattcctatagaagtcttttaaagtttgatattcctggttcaataccttctaaatgt
aaaataatcaaagcactattatatatatatgttaacagaaaagataaagatcattgcagc
tatccatctcaaactgtaacagtttataataacctggttaattttagccaaaacacagtt
acatggagtaatgcacctaatatttcaattactctatataaaaccaaaatatctaataga
gatataggtcattatgtaaaatttgatattacaaatttagttaaaggctggtacaataat
accattgcaaataatggtttaacattagtcggaatagaggatactccttatactataatt
ggatatgatagcagtagaggcactaatagtccttatttatctatagattataattgtgat
actccttgtccaatatgtccaactggtcctaccggtcctcagggatgtcctggtcctacc
ggtcctaaaggatgtcctggccctgctggtccccaaggtaaacctggccctaccggccct
aaaggtgatcccggccctaccggtcctcaaggtaaacctggccctaccggtcctcaaggt
aaacctggccctaccggccctaaaggtgatcccggtcctactggtccccaaggtaaacct
ggtcctaccggccctaaaggtgatctcggccctactggccctaaaggtgatctcggccct
actggccctaaaggtgatcccggccctaccggtcctcaaggtaagcctggtcctactggc
cctaaaggtgatcccggtcctactggccctaaaggtgataccggtcctactggtccccaa
ggtaaacctggccctaccggccctaaaggtgatcccggccctaccggtcctcaaggtaag
cctggtcctactggccctaaaggtgatcccggtcctaccggtcctcaaggtgatcccggt
cctactggccctaaaggtgatcccggccctactggccctaaaggtgatcccggtcctact
ggccctaaaggtgatcccggtcctactggccctaaaggtgatcccggtcctactggccct
aaaggtgatcccggccctaccggtcctcaaggtaaacctggccctaccggccctaaaggt
gatcccggccctaccggtcctcaaggtaaacctggccctaccggccctaaaggtgatccc
ggccctaccggtcctcaaggtaagcctggtcctactggccctaaaggtgataccggtcct
actggccctaaaggatgtcctggtcctaccggccctaaaggatgtcctggtcctaccggt
cctaaaggatgtcctggccctaccggccctaaaggtgatcctggttctaactgctctgca
tttggatttggcactaatatatgtactaacaatataaacatttgttctaataagacactt
ctatcatttccaaatgatatacaattaaaaaatgttaaattaaataacgataataacgta
tttactattaaaaaaaggggatattattttatagaatataatataaactgtattacagat
attgagataagttctagattattaattaataaattaccagttagtgcatcccaaagaact
acaaaaaacaataactgcaacttattatcaaatcttataattaaactcaatgccgatgat
acccttagcctgcaattattcaaaaaagataattcttgtaatcgcatgtcatatattaaa
aatgcttctataacaattataaaattagactaa
DBGET
integrated database retrieval system
