Clostridium tyrobutyricum: CTK_C17470
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Entry
CTK_C17470 CDS
T04331
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ctyk
Clostridium tyrobutyricum
Pathway
ctyk03420
Nucleotide excision repair
ctyk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ctyk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CTK_C17470
03430 Mismatch repair
CTK_C17470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctyk03400
]
CTK_C17470
Enzymes [BR:
ctyk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CTK_C17470
DNA repair and recombination proteins [BR:
ctyk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CTK_C17470
MMR (mismatch excision repair)
Other MMR factors
CTK_C17470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
DEAD
AAA_12
AAA_11
AAA_30
AAA_14
AAA_25
GpA_ATPase
ResIII
Motif
Other DBs
NCBI-ProteinID:
AND85002
LinkDB
All DBs
Position
complement(1739774..1741606)
Genome browser
AA seq
610 aa
AA seq
DB search
MFKDKQLDEKQREAVYTEYTNVEVCAPPGSGKTTVIINRVCHLIEDMKVDPLNIVVITFT
KSAAHNMKNRYLAISKYKDKIPFFGTFHSLFYKILLEYKHNINIIEEDYSFKIIKNVLKM
YLDCVPRQKIREILNDISMLKNKNSSIDNFKSKTDKSVFIHCFNSYEKYKLKNNLLDFDD
IQLQAKKLFINNENILNRYRKIFKYVLVDEFQDCDELQLKLLQLVCLGNSIFAVGDEDQC
IYGFRGSNPSYMVGFDKYFSEGKKLFLNLNYRSVKNVVELSKNLIMNNKNRNLKSINANK
KFIGKIEFFRFEGEYDEANYISKKIIEIVGSNKYNYRNIAILYRTNIESRNIISNFLKRN
IKFKFLNGSYNFFEHFICMDIIDYLNISIMEYDADSFANIINKPYRYISKINIAKVKKYP
YRENCFDILSNIRNMPVFQIKKILKLKKIVSRFKKMPLDKVIDTIIYKIGYINYLEKLCK
KNNIDIAECENILQEFKMCFEKFNDISEFLEYVKKFSNSIKESIHFDNAVILSSIHGVKG
MEFDNVFIINCNEEIIPHVNSIPKSLEEERRLFYVAITRAIDNLYIYSVENICGKPKEAS
RFLDELFPNK
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaagataagcaacttgatgaaaaacagagagaggctgtttatactgaatatact
aatgtagaagtatgcgcaccaccaggttcgggaaaaaccactgttattataaatagagtc
tgtcatttaatagaagacatgaaagtggatccacttaatatagtagtaataacatttacc
aaatcagctgcacataatatgaaaaacagatatttagctatttcaaaatataaagataaa
atacctttctttggaacatttcattctctattttataaaatattattagaatacaaacac
aatataaatataatagaagaagattacagctttaaaattataaagaatgtattaaaaatg
tatttagattgtgtaccaaggcagaaaattagagagatattaaatgatatatctatgtta
aaaaataaaaattcaagtattgataattttaaaagtaaaactgataaaagtgtttttatt
cattgcttcaacagctatgaaaaatataaactcaaaaataatttactggattttgacgat
atacagttacaagccaaaaaattatttataaataatgaaaatattttaaataggtataga
aaaatatttaaatatgtactggttgatgaatttcaagattgtgacgaacttcagttaaaa
ttgctgcaacttgtttgtttaggcaattcaatatttgcagtaggtgacgaagatcagtgt
atatacggattcagaggttccaatccaagttacatggtaggctttgataaatattttagt
gaaggaaagaaactttttttaaatttaaattatagaagtgtgaaaaatgttgtggaactt
tctaaaaatcttataatgaacaataagaatagaaatttaaaaagtataaatgccaataaa
aaatttataggaaaaatagaattctttaggtttgaaggagaatatgatgaggcaaattat
atttccaagaaaataatagaaattgtaggttccaataagtataactatagaaatattgcc
attttatatagaaccaatatagagtcaagaaatataatatccaattttctaaagaggaat
ataaaatttaagtttttaaatggaagctataatttttttgaacactttatatgcatggat
ataatagattatttaaatatttctataatggagtacgatgcagacagttttgctaatata
ataaacaaaccttatagatatattagtaaaatcaatatagcaaaggttaaaaagtatcca
tatagagaaaattgttttgatattttaagtaatataagaaatatgcctgtctttcaaata
aaaaagatattaaaattaaaaaaaattgtatcaagatttaaaaaaatgcctttggataag
gtcatagacactataatatacaaaattggatatataaattatcttgaaaaattatgcaaa
aagaacaatattgatattgctgaatgtgaaaatatattgcaggagtttaaaatgtgtttt
gaaaaattcaatgatataagtgaatttttagaatatgtaaaaaagttttcaaatagtata
aaagagagtatacattttgacaatgctgtaattttaagtagtattcatggagtaaagggt
atggagtttgataatgtatttataataaactgcaatgaggaaataattccacatgtaaat
agtattccaaaatcattggaagaggaaagacgacttttctatgttgcaattacaagggct
atagataatctatatatatattcagttgaaaatatatgtggaaaaccaaaggaagcatcg
aggtttttagatgaactttttcctaataaataa
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