Clostridium tyrobutyricum: CTK_C17670
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Entry
CTK_C17670 CDS
T04331
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ctyk
Clostridium tyrobutyricum
Brite
KEGG Orthology (KO) [BR:
ctyk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ctyk03009
]
CTK_C17670 (rimO)
Enzymes [BR:
ctyk01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CTK_C17670 (rimO)
Ribosome biogenesis [BR:
ctyk03009
]
Prokaryotic type
ribosomal protein modification factors
CTK_C17670 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
KH_dom-like
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AND85022
LinkDB
All DBs
Position
complement(1762460..1763800)
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AA seq
446 aa
AA seq
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MNKLKVGIISLGCDKNRVDSEIILNNLKYDYDLVSELKQADIIIVNTCGFIESAKQESID
TILDMSKYKEEFNCKILIATGCLAQRYGNEIMQLLPEVDIMLGVNDYDKLNESIKNYIEN
KSDKVYSFNYSNVKINEGSRILTTASSTAYVRIAEGCDNLCTYCIIPKIRGKYRSRNMKS
IFKECMELVQQGVKEIILIAQDTTRYGIDLYGRKMLPELLQDISKIDGLKWIRLLYCYPE
EITMELIYEIAKNNKICKYIDIPIQHISDNILKSMGRKGRKAEIIQNINNLRKFIPNIVI
RTTLIVGFPGETERDFRELKQFVNDMKFDKLGVFKYSREEGTPAYKMKSQIPEDIKVQRE
GEIMFLQQKISQKINRAKIGKTYEVILEDKKDDLYFGRSYEMSPEIDGSIYIRNKSELKI
GSIIKIKIVDSLEYDLMGVVCDEFSK
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
ttgaataagctaaaagtcggaattataagtttaggctgtgataaaaatagagtggattct
gaaattattttaaataatttaaaatacgattatgatcttgtttctgaattaaaacaggca
gatataataattgtaaatacttgcggatttatagaatctgccaagcaggaatcaatagat
accatactggacatgtctaagtacaaagaagaatttaactgtaaaatactaattgctaca
ggatgcttggcacaaagatatggcaatgaaattatgcagcttcttccagaggttgatata
atgcttggagttaatgattatgacaaattgaatgaaagtattaaaaattatattgaaaat
aaatctgataaggtatacagttttaactatagtaatgttaaaataaatgaaggaagtaga
atacttacaacagcatcatcaactgcttatgtgagaattgcagaaggatgcgataattta
tgcacttactgtataatacctaaaattagaggaaaatatagaagtaggaatatgaagtca
atttttaaagaatgtatggaacttgtgcagcaaggagtaaaggaaataatattaatagct
caggacactacaaggtatggaatagatttatatggaagaaaaatgctgcctgaactttta
caggacatttccaaaatagatggattaaaatggattagactgctttattgctatccagaa
gagataacgatggaactaatatatgaaatagcaaaaaacaataagatatgcaaatatata
gatatacctatacagcatataagtgataatatacttaaatccatgggcagaaaaggaaga
aaagctgaaataattcaaaatataaataatctgcgaaaatttattcccaatattgttata
agaactacgttgatagtaggatttcccggtgaaacagaacgggattttagagaattaaaa
caatttgtaaatgatatgaagtttgataaacttggagtttttaaatactcaagggaagag
ggaactccagcttataaaatgaaaagccagattccagaagatataaaagttcaaagagaa
ggagaaattatgtttcttcagcaaaaaatatctcagaaaatcaatagggctaaaatagga
aaaacatatgaagttattttagaagataaaaaagatgatttatattttggcaggagttat
gaaatgagtccagagatagatggaagtatatacataaggaacaaaagtgaattaaaaatt
ggcagtataataaaaataaaaattgtagatagtcttgaatatgatttaatgggagttgta
tgtgatgaatttagcaaataa
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