Clostridium tyrobutyricum: CTK_C17990
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Entry
CTK_C17990 CDS
T04331
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ctyk
Clostridium tyrobutyricum
Brite
KEGG Orthology (KO) [BR:
ctyk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ctyk03032
]
CTK_C17990 (topA)
03400 DNA repair and recombination proteins [BR:
ctyk03400
]
CTK_C17990 (topA)
Enzymes [BR:
ctyk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CTK_C17990 (topA)
DNA replication proteins [BR:
ctyk03032
]
Prokaryotic type
DNA Topoisomerases
CTK_C17990 (topA)
DNA repair and recombination proteins [BR:
ctyk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CTK_C17990 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
HVO_2753_ZBP
Zn_ribbon_GRF
Toprim_4
Aegerolysin
HypA
zf_Rg
Zn_ribbon_RPB9
Motif
Other DBs
NCBI-ProteinID:
AND85054
LinkDB
All DBs
Position
complement(1797226..1799343)
Genome browser
AA seq
705 aa
AA seq
DB search
MGQKLVIVESPAKAKTIGKYLGKNYVVEASMGHVRDLPKSQLGVDVDNDYNPKYITIRGK
GELLSKLRKEAKKSDKIYLATDPDREGEAISWHLLHALNLDEDDKCRIEFHEITKSAVKG
SLKQARKININLVDAQQARRVLDRLVGYKISPILWRKVKWGLSAGRVQSVTLKMICEREK
EIKEFIPKEYWTVECFLHKQSTKKTFKVRLTTLNKKKIEINNKEEVDKIIEDLKSGEFIV
KNVKKTSKNKNPLPPFTTSTLQQDSYRKLNFSTKRTMSVAQQLYEGVDIKKHGTVGLITY
MRTDSVRISEEAQNDCRDFVKETLGDKYIPEKPRNFKSKKHIQDAHEAIRPTNISLVPDQ
IKESLKPEQYKLYNLIWKRFVASQMAQSIIDVKSIDIINKNYGLKASGSKVNFDGFMKVY
DYSTGDEKDETSLPELSVDEKLIEKSIDEKQHFTQPPARYSEASLVKTLEENGIGRPSTY
APIISTILNRKYVERDKKTLIPTELGNIVNNIVSEYFKQIVDVEFTAGMESKLDNIEEGK
VNWRKVVGEFFKPLKKSIDIAEKEVAKITIEDKVTDIKCDKCGRFMVIKHGRFGDFLACP
GYPECKNTKPIVEELDVQCPKCGGKIVLKRSRKGRKFYGCSNYPDCDFVSWFEPTNELCP
ECGNYMVKKYNKSKGSFLECSNSECKHRKYKEDKNSDSDSDNKDK
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgggacagaaattagttatagtagagtcgccagcaaaagctaaaacaataggcaaatat
ttgggaaagaattatgtagtagaggcttccatggggcatgttagggatctgcctaaaagt
caactaggtgtagatgttgacaatgactataatcctaaatatataacaataagaggaaaa
ggtgagctcttaagcaagcttagaaaagaagctaagaaaagcgataaaatatatcttgct
accgaccctgatagggaaggtgaagctatttcatggcatttattacatgctttaaattta
gatgaagatgataaatgtagaatagaatttcatgagattactaaaagtgcagtcaaaggc
tctttaaagcaggcaagaaaaatcaatataaatcttgtagatgcacaacaggcacgaaga
gttttagatagattggtaggatataagataagccctatactttggagaaaagttaagtgg
ggattaagtgcaggaagagttcaatctgttacattaaagatgatatgtgaaagagaaaaa
gagataaaggaatttataccaaaggaatattggacagtagaatgttttttgcataaacaa
tctacaaaaaaaacttttaaagttagacttactactttaaataaaaagaagattgagata
aacaataaagaagaagtagacaaaataattgaagatctaaaatcaggagaatttatagta
aaaaatgttaaaaagacttcaaaaaacaagaatccactgccgccatttactacaagtaca
cttcaacaggattcatatagaaaattgaatttttctacaaagagaactatgtctgtagca
caacaactttatgaaggtgttgatataaaaaaacatggtacagttggacttataacatat
atgagaacagattcggtaagaatttcagaagaggctcaaaatgattgcagggattttgta
aaggaaactttaggagataagtatattccagaaaaaccaagaaattttaaaagtaaaaaa
catattcaagatgcacatgaagctataagacctactaatatatcattagttcctgatcaa
attaaggaaagcttaaaacctgaacaatataaattatataacttaatatggaagagattt
gtagcaagccagatggcacaaagtataattgatgtaaaatcaatagatataataaataaa
aattatggattgaaagcaagtggatcaaaggttaattttgatggatttatgaaagtctat
gattattctacaggcgatgaaaaagatgaaacaagtttaccagaactaagcgtagatgaa
aaattaattgagaaatccattgatgaaaaacagcattttactcaaccaccagcaagatat
tcagaggcatcattagtcaagacattggaagaaaacggaataggaaggccaagtacttat
gcaccaataatatctacaattcttaacagaaaatatgttgagagggataaaaagacattg
attcctacagaattagggaatatagtaaataatatagtaagtgaatatttcaagcaaata
gtagatgtagaatttacagcaggcatggaatcaaaattagataatatagaagaaggcaaa
gttaactggagaaaagttgtaggtgagttttttaaacctttaaagaaatcaattgatata
gctgaaaaagaagtagccaagataacaatagaagataaagtaacagatataaagtgtgat
aaatgtggtaggttcatggtaataaagcatgggagatttggcgatttccttgcctgtcca
ggttatcctgaatgtaaaaatacgaaacctatagtagaagagttggatgtgcagtgccct
aagtgtggaggtaagatagtattaaaaagaagcagaaaaggaagaaaattttatgggtgc
agtaattatccagactgtgattttgtaagttggtttgaaccaacaaatgagctgtgtccc
gagtgtggaaattatatggtgaagaaatacaataaatctaaaggaagttttttagaatgt
tcaaatagtgaatgtaaacataggaaatataaagaggataaaaattctgattcagattca
gataataaggataaatag
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