Clostridium tyrobutyricum: CTK_C18120
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Entry
CTK_C18120 CDS
T04331
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
ctyk
Clostridium tyrobutyricum
Pathway
ctyk02024
Quorum sensing
ctyk03060
Protein export
ctyk03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ctyk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
CTK_C18120 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CTK_C18120 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CTK_C18120 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ctyk02044
]
CTK_C18120 (ffh)
Enzymes [BR:
ctyk01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
CTK_C18120 (ffh)
Secretion system [BR:
ctyk02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
CTK_C18120 (ffh)
Eukaryotic Sec-SRP protein
CTK_C18120 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
cobW
SRPRB
AAA_31
AAA_17
Roc
PduV-EutP
ResIII
Arf
MMR_HSR1
NTPase_1
AAA_30
nSTAND3
ATPase
ArsA_ATPase
AAA_18
AAA_24
Sol_i_2
AAA_14
APS_kinase
ATP_bind_1
Zeta_toxin
AAA_33
AAA_16
NPHP3_N
YqeC
MraZ
DUF6331
Motif
Other DBs
NCBI-ProteinID:
AND85067
LinkDB
All DBs
Position
complement(1807573..1808928)
Genome browser
AA seq
451 aa
AA seq
DB search
MAFEGLASKLQETLKKLRGKGKLSEKDIKDAMREVKLALLEADVNYKVVRDFIKSVSEKC
FGEAVLKSLTPAQQVIKIVNEELTALMGKSESSIEYSKNGLTIIMLVGLQGAGKTTMCGK
LALELRKKNKKPLLVACDIYRPAAIKQLQVVGKQIDIPVFSMGDRVTAADISKGAVEYAK
NNNLNVVIIDTAGRLQIDEKLMNELKDVKQVVNPNEIMLVVDSMTGQDAVNVAKSFNEQI
DITGVILTKLDGDTRGGAALSIRAMTGKPIKFIGLGEKMNDFQVFHPDRMASRILGMGDV
LSLIEKAQQSIDQDEAKQLGERMLNKEFNFQDFLDVMQQAKKLGPISKLVEMIPGVDSKI
LKGVDLSQGEKDLKIKEAIIKSMTQKERLSPVIISSSSSRKKRIASGSGTTIQQVNRLLK
DFDKTKKMMKQFNGIKNGKGFGKNLFGKMPF
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgaaggattggcatctaagcttcaggaaactttaaaaaagcttagaggaaaa
ggtaagctttcggaaaaagatataaaagatgcaatgagagaagtaaaattggcacttttg
gaagcagatgttaactataaagttgtacgtgattttataaaaagtgtaagtgaaaaatgt
tttggagaagcagtacttaagagtttaactccagcacagcaagtcataaagatagtaaat
gaagagctaactgctttaatgggaaaaagtgaaagttctattgagtattcaaaaaatgga
ttaaccataataatgcttgtaggacttcaaggtgcaggaaagacaacaatgtgtggaaaa
ttggcacttgaacttagaaaaaagaataaaaaaccacttttagtagcatgtgatatatat
agaccggctgctataaaacagttacaggtagtaggaaagcagatagatattcccgtattt
tccatgggagatagagttacagcagcggatatatcaaaaggagctgttgaatatgcaaaa
aataataacttaaatgtggtaataatagatactgcaggcagacttcaaatagatgaaaaa
cttatgaatgaacttaaagatgtaaaacaagtagtaaacccaaatgagattatgttagtt
gttgattcaatgacaggtcaggatgctgttaatgtagcaaagagtttcaatgaacaaatc
gacattacaggggtcatactgacaaaactcgatggagatactagaggaggggcagctctt
tctataagggccatgacaggaaaacctataaaatttataggcctgggagaaaaaatgaat
gattttcaggtatttcatccagacagaatggcctctagaatattgggtatgggtgatgta
ctgtcacttatagaaaaagcccagcaatccatagatcaggatgaagcaaaacaactcgga
gagagaatgttaaacaaggaatttaacttccaagattttttggatgttatgcagcaggct
aaaaagcttgggcctattagtaaacttgtagagatgattccaggagttgattcaaaaatt
ttaaaaggtgtagatctttctcaaggagaaaaggatttgaaaataaaggaagctattata
aaatccatgactcaaaaagagagattgagtcctgtaattataagcagttcttcttcaaga
aaaaaaagaatagcttctggttcaggaactacaatacaacaggttaatagacttcttaaa
gactttgacaagactaaaaaaatgatgaagcaatttaatggtattaagaatggaaaaggt
tttggcaaaaatttatttgggaaaatgccattttaa
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