Clostridium tyrobutyricum: CTK_C19500
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Entry
CTK_C19500 CDS
T04331
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
ctyk
Clostridium tyrobutyricum
Pathway
ctyk00900
Terpenoid backbone biosynthesis
ctyk01100
Metabolic pathways
ctyk01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ctyk00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
CTK_C19500
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ctyk01006
]
CTK_C19500
Enzymes [BR:
ctyk01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
CTK_C19500
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
CTK_C19500
2.5.1.29 geranylgeranyl diphosphate synthase
CTK_C19500
Prenyltransferases [BR:
ctyk01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
CTK_C19500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
zf-C4H2
Motif
Other DBs
NCBI-ProteinID:
AND85202
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All DBs
Position
complement(1942832..1943722)
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AA seq
296 aa
AA seq
DB search
MKKGNNDMIENLRQELNSYLHEYMSGKGSYNKKIYEAMQYSLDAGGKRIRPILFLLTYMI
YKKEYRNVMEIAAAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEGIAVLAGDGLL
NEGMSLMFKHCLKDTNKNKVNACSIIAESAGVEGMVGGQTVDLLSEGAKIPIDQLYYMHS
KKTGALIKAAIVSAAVYVGASEDEIDKLSYYGKKIGLAFQIKDDILDVTGDTKKLGKKVK
SDANNNKTNFITTYGLNKCMEMCNSITSDCVEVLRGINRDTHDLERLTVFLLNREN
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagggaataatgatatgattgaaaatttaagacaagaactgaattcatattta
catgaatatatgtctggaaaagggtcttataataaaaaaatatatgaagcaatgcagtat
agtttagatgcaggtggaaagaggataaggccaatattatttttacttacttatatgatc
tataaaaaagaatatagaaatgttatggaaatagctgcagctattgaaatgatccatact
tattcactaattcatgatgaccttccatctatggataatgatgatctaagacgtggtaag
cctaccaatcataaggtttttggagaaggaattgcagtgcttgcaggagatggcctttta
aatgagggaatgagccttatgtttaagcattgtttaaaggatactaataaaaataaagta
aatgcgtgcagcattattgccgagagtgcgggagttgaaggtatggtgggtggtcagact
gtggatttactaagtgaaggtgctaaaatacctatagatcagttatactatatgcacagc
aaaaaaacaggagctcttataaaggctgctattgtgtcagcagcagtatatgtcggtgcc
agtgaagatgaaatagacaaattaagttattatggtaaaaaaataggattggcatttcaa
ataaaagatgatatattggatgtaaccggggataccaaaaaattagggaaaaaagtaaaa
agcgatgcaaataacaataaaacaaattttataactacttatggtttaaataagtgtatg
gaaatgtgtaattccattacaagtgattgtgtagaagtattacgcggtataaatagagat
acccatgacctggaaagattgactgtgtttctgctaaacagggaaaattga
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