Clostridium tyrobutyricum: CTK_C19990
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Entry
CTK_C19990 CDS
T04331
Symbol
spoVD
Name
(GenBank) stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
ctyk
Clostridium tyrobutyricum
Pathway
ctyk00550
Peptidoglycan biosynthesis
ctyk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ctyk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CTK_C19990 (spoVD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ctyk01011
]
CTK_C19990 (spoVD)
Peptidoglycan biosynthesis and degradation proteins [BR:
ctyk01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
CTK_C19990 (spoVD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PASTA
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AND85251
LinkDB
All DBs
Position
complement(1981538..1983730)
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AA seq
730 aa
AA seq
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MPKREYRDRVITRKRMIIVFSFLFITFFVLISRMLYVMVYKSPKLKAMAVAQWTSDVKID
AKRGRILDRNGNELAISANVYRVDLDMNTLRDTMKEKKLSQDQVVTMISSALSMDKSEVL
KTLGKRLPGGLPLGSATLKRRIEKPEADKVRGLNLNGVLVSADTKRYYPNNNFLAHVLGH
TNSDGKGLTGVELYYNKQLSGTPGRRITETDSKSKDLPYTISEFTKPVDGKDVELTIDSM
IQHFAEKAADQALKDNKAKAVSIVVMDPNNGEVLAMVNKPDYNPNDPWVKGKTYDELQKS
WRNRAVSDTFEPGSIFKVVTADTALETNSVDVNNDSFSCNGSITIGNKTIHCWKSGGHGV
QKFPDILKNSCNVGFAQLGKMIGKEKLNQYIQKFGFGQKTGIDLPGEAKGIIKRTKDISD
IDLATISFGQANTVNMMQYLKAFNTVANGGYFITPHVMKEIDHYNESKNEEVVDEKYNLN
EKNKKKLIDSSKAAQLRTYLERVVSEGGGKNAFIDGYHIAGKTGTAQKAGVGGYQSGKYV
SSFAGMAPANNPKITLLLSIDEPDSSNYYAAQTAAPAARQLFLDIFNYLGMKSDGSSEEI
ARSMLKNVVVPDVRGMKVADVESKLKEMNLVPESDTNGEYVVDMNPKPGYTVKEGSKVVL
HTSQSQAYNKVVTVPDVNGMSPENVISVFNSLGLKANVHGNGMVSDQDVEPGKEVEKGTT
INISTELIGD
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
ttgcctaaaagggaatacagggatagagttataactagaaaaagaatgataattgttttt
agttttctgtttataactttttttgtactaattagcagaatgctctatgttatggtctac
aaatctccaaagctaaaagctatggcagtggcacaatggacaagtgatgttaaaattgat
gcaaaaagaggcagaatcctagatagaaatggaaatgaactggctataagtgcaaatgta
tatagggtggatttggatatgaatactttaagagacaccatgaaagaaaaaaaactttcc
caggatcaggtggtaacaatgatttcttcagccctttctatggataagagcgaggtatta
aaaactcttggaaagaggcttccagggggactgccacttggatcagccacacttaagaga
aggatagaaaaacctgaagcagataaagtaagaggactgaatttaaatggagtacttgtt
tcggcggatacaaaaagatattatccaaataataattttttggcacatgtgcttgggcat
actaattcagatggaaagggacttacaggagtagagctttattataataaacagctttct
ggaactccaggaagaagaattactgaaactgacagcaagagcaaggatcttccatatact
atatctgaattcacaaaacctgtagatgggaaagatgtcgaactcacaattgacagcatg
attcagcattttgctgagaaagcagcagatcaggctttaaaggacaataaagcaaaagct
gtaagtatagtagttatggatccaaataatggggaagtattggctatggtaaacaaacca
gactataatccaaatgatccatgggtaaagggaaagacctatgatgaacttcagaagagc
tggagaaacagggctgtaagtgatacttttgaaccaggttccatatttaaggttgtaaca
gcagatactgctcttgaaaccaattctgtagatgtaaacaatgatagcttttcctgtaat
ggaagcataactataggaaataagaccatacattgctggaagtcaggaggacatggggta
cagaaatttcccgatatattaaagaattcatgtaatgtaggctttgctcaacttggaaag
atgataggaaaagaaaaattaaatcaatatatacaaaaatttggttttggacaaaagacg
ggaatagaccttccaggagaggcaaagggtattataaaaaggaccaaggatataagtgac
atagatttggctaccatttcttttggacaggcaaatacggttaacatgatgcagtattta
aaagctttcaatactgtagccaatggaggatatttcataacacctcatgtcatgaaagag
atagatcactataatgaaagcaaaaatgaagaagtagttgatgaaaaatataatttaaat
gagaaaaataagaaaaaacttatagattccagtaaggcagcacaacttaggacatatctt
gagagggtagtttcagaaggtggaggaaaaaatgcatttatagatggatatcatatagca
ggtaagactggaactgcacaaaaagctggtgtaggtggatatcagtcaggaaaatatgta
tcttcttttgcgggaatggctccagctaacaatcctaaaataacactgcttttatccatt
gatgaaccggattcctccaattactatgcagctcagactgcagctcctgcagccaggcaa
ttatttttggatatattcaattatcttgggatgaaaagtgatggaagttctgaagaaatt
gccaggagcatgcttaaaaatgtagtggttcctgatgttagaggaatgaaagtagctgat
gttgaaagtaaacttaaagagatgaatttagtgccggaatctgatactaatggtgagtat
gtggtagacatgaatcctaaacctggttacactgttaaagagggaagtaaagttgtgctt
catacatcacaaagtcaggcttacaataaggtagtaacagtaccggatgtaaatggcatg
agccctgaaaatgtaataagtgtatttaatagcctgggattaaaagctaatgtccatgga
aatggaatggtatctgatcaagatgtagaaccaggtaaggaggttgaaaaggggacaact
ataaatattagtactgaactcattggagattaa
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