KEGG   Clostridium tyrobutyricum: CTK_C20690
Entry
CTK_C20690        CDS       T04331                                 
Symbol
sbcC
Name
(GenBank) DNA repair ATPase
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
ctyk  Clostridium tyrobutyricum
Brite
KEGG Orthology (KO) [BR:ctyk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ctyk03400]
    CTK_C20690 (sbcC)
DNA repair and recombination proteins [BR:ctyk03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     CTK_C20690 (sbcC)
    Archaeal homologous recombinant proteins
     CTK_C20690 (sbcC)
SSDB
Motif
Pfam: AAA_23 SbcC_Walker_B AAA_29 AAA_27 SMC_N
Other DBs
NCBI-ProteinID: AND85321
LinkDB
Position
complement(2049006..2052497)
AA seq 1163 aa
MRPIKLKIKGLNSFIETQEIDFHKLMYRGLFGIFGPTGSGKSTILDGITLALYGEVARKS
SNFINTNCSNLYVSFEFQISAKEINIYRVDREYRRDKEGRIRTKSARILDITCGEEILEE
GVKSVNKKCEEIIGLQLDDFTRTVVLPQGKFSEFLTLSGKERRDMLERLFNLQKYGNELS
SKLSREVSSQKQKFNVLQGELKGYDNINVDILKNKTEQFSIIKEQCSEYEKQLAEIEVKF
NEGKELMDLQNDLKHKLVEQDSLEKNKAKIESYKNKILLCESALKVKPYVDNYESTVQKI
KSVKNEIMHLEDEMKKVEENRALVYKFLTEAKADNDNKLPELRLQYQKIVDAIQERDILN
RVICENNSIKESIVKLSDNIDTFKYEIENNGKYIESIYNSISLKEKKCDELETSEQYKRK
VNEAIVILSNYENLIKQRDVLCGKIKSTVYIIESNERESKVLFNDLNEKKHLLQEKEDML
DELLKNCPGDQNMLLELQKKISSTDDKWTQYNSITYNIKNSSNIIEDFKEKLNQDNKKIE
ELEKHISNRNGEIESIHVENLAQTLRSKLIEGEPCPVCGSVHHIGQNIKTTDTHNLKQLK
LDLDKKKKDYELLTARIIKIKANIDGEIKNIEKNNEQLEQLGEEFKSVSVDELKHQFRLL
RDNIEKFNSEKTSLESQIKILTENKNKLEIGYSKMFAVQEQNKSQLVNLKTELEKLENEY
KGLYDILSNMKTELKVHDFKQKNMEIYEREKKRISIENRLKDLRVALKKNQNQREILKGK
FTDLRERLNENKVRFVENEKIIHEKKTSIKAKLENSENMEQLESVKESILRRIEQIKDTY
IRTEKQKNDIDTKYNECNSNLVASQKNLLNLKERNTQERISLENILKEQNINNIDEVKNN
IVDVLEIKKLKSEVEEYNRLSAKLAGTLEDINKKIGSRKITQEQWDEIKKSRNEKNKIFE
ELKNTRIKLEDEIKYISYKLNELNILSKSKQKLNHKLSILDDLDKLFKGKKFVEFVAANQ
LKYISIEASKRLRHITCGKYGLEVDDEGKFLIIDYKNGGEKRDASTLSGGEVFVTSLALA
LALSSRIQLKGTAPLELFFLDEGFGTLDDNLLEIVMDSLEKIHNKRLSIGIISHLESIKD
RVPVKLVVTPAEAGIGGSRVKIE
NT seq 3492 nt   +upstreamnt  +downstreamnt
atgagaccaattaaacttaaaataaagggattgaacagctttatagaaacgcaggaaata
gattttcataaattgatgtacagaggtttgtttggcatatttggtcctacaggaagtggc
aagtctacaatacttgatggtattacccttgcattatatggcgaggttgcaagaaaaagc
tctaattttattaatacaaattgcagcaatttatatgttagttttgaatttcagatatct
gcgaaggaaataaatatctatagagtggatagagaatacaggagagataaagagggaagg
atcagaacaaaatctgctaggattttagatattacttgtggagaagaaatattagaagag
ggagtaaaaagtgtaaacaaaaagtgtgaagaaataataggcctgcagcttgatgatttt
accaggacggtggttttgccccagggaaaattcagtgaatttttaacattgagtggaaaa
gaaagaagggatatgcttgagagattgtttaatcttcagaaatatggtaatgaactttct
tccaaattgtccagagaagtaagcagccaaaaacagaagtttaatgtgcttcagggtgaa
ctaaaaggctatgataatattaatgtagatattcttaaaaataaaactgaacagttctca
ataattaaagaacagtgcagtgaatatgaaaaacaacttgcagaaattgaagtcaaattc
aatgagggaaaagaattgatggatcttcaaaatgatttgaaacataagcttgttgaacag
gattcacttgaaaaaaataaagccaaaatagaaagctacaaaaataagattttattgtgt
gaaagtgcactaaaagtaaaaccatatgttgataactatgaaagtacagtccaaaagatt
aaaagtgtaaaaaatgaaataatgcatttggaagatgagatgaaaaaagttgaagaaaat
agagctttagtatacaaatttttaactgaagccaaagctgataatgacaataaattacct
gagctgagattgcagtatcaaaaaattgtagatgccatacaggaaagagatattttaaat
agagttatatgtgaaaataattcaataaaagaaagcattgtaaaattgagtgacaatatt
gatacttttaaatatgaaatagaaaacaatggcaagtatattgaatcaatatataatagt
ataagtcttaaggaaaaaaagtgtgatgagcttgaaacttcagaacaatacaagcgaaaa
gtcaatgaggcaatagtgattttaagtaattatgaaaatttaataaagcaaagagatgtt
ttatgtggtaagataaaaagcacagtatatattattgaaagtaatgaaagggaaagtaag
gtattattcaatgatttaaatgaaaaaaagcatttgctgcaggaaaaagaagatatgttg
gatgaactgttaaaaaattgtccaggggatcaaaatatgcttcttgaacttcaaaaaaag
atatcttctacagacgacaaatggactcaatataacagcattacttacaatattaaaaat
agcagtaatattatagaagattttaaagaaaaattgaaccaagataataaaaaaattgag
gaattggaaaaacatatcagtaatagaaatggtgagattgaaagtatccatgttgaaaat
ctcgcccagacattgagaagtaaattgatagaaggtgagccatgtcctgtatgcggttca
gttcatcatattggacaaaatataaagacgactgatactcataatttaaagcagctaaaa
ttggatttggataaaaagaagaaagattatgaattgttgactgcaagaattataaaaata
aaggcaaatattgacggagaaatcaaaaatatagaaaaaaacaatgagcaattggaacaa
ttgggggaagagtttaaatcagtttctgtagatgagttaaaacatcaatttagattgttg
agggataatattgaaaaattcaattcagagaaaactagtctggaaagccaaattaaaatc
ttaactgagaataaaaacaaattggaaataggatatagcaaaatgtttgccgttcaggaa
cagaataaaagtcaacttgttaatttgaaaacagaacttgaaaaattggaaaatgaatat
aagggtttatatgatatattgtccaatatgaaaactgagctcaaggtccacgacttcaag
cagaagaacatggaaatatatgaaagagaaaagaaaagaatttccatagaaaatcgatta
aaagatttaagggtggctttgaaaaaaaatcaaaatcagagagagattctaaaaggaaaa
tttacagatttgagagaaagattaaatgaaaataaagtcagatttgttgagaatgaaaag
ataatacatgagaaaaaaactagtataaaagctaagcttgaaaacagtgagaatatggaa
caacttgaaagtgttaaggagagtatactccgcaggatagagcagataaaagatacatac
attagaacagaaaaacaaaaaaatgacatagataccaaatataatgaatgcaattccaat
ttggtagcatctcaaaaaaacttgctgaatttaaaagagagaaatacacaggaaagaata
agtcttgaaaatatattgaaagaacaaaatataaataatatagatgaagttaaaaataat
attgtagatgtactggaaatcaaaaaactaaaaagtgaagtagaagaatataatagatta
tcagctaaattggcaggcactctggaagatattaataaaaaaataggcagtagaaagatt
acacaggagcagtgggatgagataaaaaagtctcgaaatgaaaaaaataaaatatttgag
gaacttaaaaatactaggataaaattagaagatgagataaaatatataagttacaaatta
aatgagttaaatatactttcgaaatcaaaacaaaaactcaatcataaattaagtatttta
gatgatctggataaattattcaaaggcaaaaaatttgtagaatttgtagctgcaaatcag
ttgaaatacatatctattgaggctagtaaaagattgagacacataacttgtggaaagtat
ggattggaagttgatgacgagggaaaattcctcattatagattataaaaatggaggagaa
aagagggatgcttcaactctgtcaggcggcgaagtatttgtaacatcacttgcacttgca
ctggcattatcctcccgaatacaattaaaaggtacggcacctcttgaattgttcttttta
gatgaaggatttgggactcttgacgataatttacttgagatagttatggattcactggaa
aaaattcacaataaaagattgtcaataggaataataagtcatctggaatcaattaaagac
agagttccggtaaagcttgttgttactccggcagaagctggaattggaggaagcagggtt
aaaatagaatag

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