Clostridium tyrobutyricum: CTK_C20690
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Entry
CTK_C20690 CDS
T04331
Symbol
sbcC
Name
(GenBank) DNA repair ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ctyk
Clostridium tyrobutyricum
Brite
KEGG Orthology (KO) [BR:
ctyk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctyk03400
]
CTK_C20690 (sbcC)
DNA repair and recombination proteins [BR:
ctyk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CTK_C20690 (sbcC)
Archaeal homologous recombinant proteins
CTK_C20690 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_27
SMC_N
Motif
Other DBs
NCBI-ProteinID:
AND85321
LinkDB
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Position
complement(2049006..2052497)
Genome browser
AA seq
1163 aa
AA seq
DB search
MRPIKLKIKGLNSFIETQEIDFHKLMYRGLFGIFGPTGSGKSTILDGITLALYGEVARKS
SNFINTNCSNLYVSFEFQISAKEINIYRVDREYRRDKEGRIRTKSARILDITCGEEILEE
GVKSVNKKCEEIIGLQLDDFTRTVVLPQGKFSEFLTLSGKERRDMLERLFNLQKYGNELS
SKLSREVSSQKQKFNVLQGELKGYDNINVDILKNKTEQFSIIKEQCSEYEKQLAEIEVKF
NEGKELMDLQNDLKHKLVEQDSLEKNKAKIESYKNKILLCESALKVKPYVDNYESTVQKI
KSVKNEIMHLEDEMKKVEENRALVYKFLTEAKADNDNKLPELRLQYQKIVDAIQERDILN
RVICENNSIKESIVKLSDNIDTFKYEIENNGKYIESIYNSISLKEKKCDELETSEQYKRK
VNEAIVILSNYENLIKQRDVLCGKIKSTVYIIESNERESKVLFNDLNEKKHLLQEKEDML
DELLKNCPGDQNMLLELQKKISSTDDKWTQYNSITYNIKNSSNIIEDFKEKLNQDNKKIE
ELEKHISNRNGEIESIHVENLAQTLRSKLIEGEPCPVCGSVHHIGQNIKTTDTHNLKQLK
LDLDKKKKDYELLTARIIKIKANIDGEIKNIEKNNEQLEQLGEEFKSVSVDELKHQFRLL
RDNIEKFNSEKTSLESQIKILTENKNKLEIGYSKMFAVQEQNKSQLVNLKTELEKLENEY
KGLYDILSNMKTELKVHDFKQKNMEIYEREKKRISIENRLKDLRVALKKNQNQREILKGK
FTDLRERLNENKVRFVENEKIIHEKKTSIKAKLENSENMEQLESVKESILRRIEQIKDTY
IRTEKQKNDIDTKYNECNSNLVASQKNLLNLKERNTQERISLENILKEQNINNIDEVKNN
IVDVLEIKKLKSEVEEYNRLSAKLAGTLEDINKKIGSRKITQEQWDEIKKSRNEKNKIFE
ELKNTRIKLEDEIKYISYKLNELNILSKSKQKLNHKLSILDDLDKLFKGKKFVEFVAANQ
LKYISIEASKRLRHITCGKYGLEVDDEGKFLIIDYKNGGEKRDASTLSGGEVFVTSLALA
LALSSRIQLKGTAPLELFFLDEGFGTLDDNLLEIVMDSLEKIHNKRLSIGIISHLESIKD
RVPVKLVVTPAEAGIGGSRVKIE
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgagaccaattaaacttaaaataaagggattgaacagctttatagaaacgcaggaaata
gattttcataaattgatgtacagaggtttgtttggcatatttggtcctacaggaagtggc
aagtctacaatacttgatggtattacccttgcattatatggcgaggttgcaagaaaaagc
tctaattttattaatacaaattgcagcaatttatatgttagttttgaatttcagatatct
gcgaaggaaataaatatctatagagtggatagagaatacaggagagataaagagggaagg
atcagaacaaaatctgctaggattttagatattacttgtggagaagaaatattagaagag
ggagtaaaaagtgtaaacaaaaagtgtgaagaaataataggcctgcagcttgatgatttt
accaggacggtggttttgccccagggaaaattcagtgaatttttaacattgagtggaaaa
gaaagaagggatatgcttgagagattgtttaatcttcagaaatatggtaatgaactttct
tccaaattgtccagagaagtaagcagccaaaaacagaagtttaatgtgcttcagggtgaa
ctaaaaggctatgataatattaatgtagatattcttaaaaataaaactgaacagttctca
ataattaaagaacagtgcagtgaatatgaaaaacaacttgcagaaattgaagtcaaattc
aatgagggaaaagaattgatggatcttcaaaatgatttgaaacataagcttgttgaacag
gattcacttgaaaaaaataaagccaaaatagaaagctacaaaaataagattttattgtgt
gaaagtgcactaaaagtaaaaccatatgttgataactatgaaagtacagtccaaaagatt
aaaagtgtaaaaaatgaaataatgcatttggaagatgagatgaaaaaagttgaagaaaat
agagctttagtatacaaatttttaactgaagccaaagctgataatgacaataaattacct
gagctgagattgcagtatcaaaaaattgtagatgccatacaggaaagagatattttaaat
agagttatatgtgaaaataattcaataaaagaaagcattgtaaaattgagtgacaatatt
gatacttttaaatatgaaatagaaaacaatggcaagtatattgaatcaatatataatagt
ataagtcttaaggaaaaaaagtgtgatgagcttgaaacttcagaacaatacaagcgaaaa
gtcaatgaggcaatagtgattttaagtaattatgaaaatttaataaagcaaagagatgtt
ttatgtggtaagataaaaagcacagtatatattattgaaagtaatgaaagggaaagtaag
gtattattcaatgatttaaatgaaaaaaagcatttgctgcaggaaaaagaagatatgttg
gatgaactgttaaaaaattgtccaggggatcaaaatatgcttcttgaacttcaaaaaaag
atatcttctacagacgacaaatggactcaatataacagcattacttacaatattaaaaat
agcagtaatattatagaagattttaaagaaaaattgaaccaagataataaaaaaattgag
gaattggaaaaacatatcagtaatagaaatggtgagattgaaagtatccatgttgaaaat
ctcgcccagacattgagaagtaaattgatagaaggtgagccatgtcctgtatgcggttca
gttcatcatattggacaaaatataaagacgactgatactcataatttaaagcagctaaaa
ttggatttggataaaaagaagaaagattatgaattgttgactgcaagaattataaaaata
aaggcaaatattgacggagaaatcaaaaatatagaaaaaaacaatgagcaattggaacaa
ttgggggaagagtttaaatcagtttctgtagatgagttaaaacatcaatttagattgttg
agggataatattgaaaaattcaattcagagaaaactagtctggaaagccaaattaaaatc
ttaactgagaataaaaacaaattggaaataggatatagcaaaatgtttgccgttcaggaa
cagaataaaagtcaacttgttaatttgaaaacagaacttgaaaaattggaaaatgaatat
aagggtttatatgatatattgtccaatatgaaaactgagctcaaggtccacgacttcaag
cagaagaacatggaaatatatgaaagagaaaagaaaagaatttccatagaaaatcgatta
aaagatttaagggtggctttgaaaaaaaatcaaaatcagagagagattctaaaaggaaaa
tttacagatttgagagaaagattaaatgaaaataaagtcagatttgttgagaatgaaaag
ataatacatgagaaaaaaactagtataaaagctaagcttgaaaacagtgagaatatggaa
caacttgaaagtgttaaggagagtatactccgcaggatagagcagataaaagatacatac
attagaacagaaaaacaaaaaaatgacatagataccaaatataatgaatgcaattccaat
ttggtagcatctcaaaaaaacttgctgaatttaaaagagagaaatacacaggaaagaata
agtcttgaaaatatattgaaagaacaaaatataaataatatagatgaagttaaaaataat
attgtagatgtactggaaatcaaaaaactaaaaagtgaagtagaagaatataatagatta
tcagctaaattggcaggcactctggaagatattaataaaaaaataggcagtagaaagatt
acacaggagcagtgggatgagataaaaaagtctcgaaatgaaaaaaataaaatatttgag
gaacttaaaaatactaggataaaattagaagatgagataaaatatataagttacaaatta
aatgagttaaatatactttcgaaatcaaaacaaaaactcaatcataaattaagtatttta
gatgatctggataaattattcaaaggcaaaaaatttgtagaatttgtagctgcaaatcag
ttgaaatacatatctattgaggctagtaaaagattgagacacataacttgtggaaagtat
ggattggaagttgatgacgagggaaaattcctcattatagattataaaaatggaggagaa
aagagggatgcttcaactctgtcaggcggcgaagtatttgtaacatcacttgcacttgca
ctggcattatcctcccgaatacaattaaaaggtacggcacctcttgaattgttcttttta
gatgaaggatttgggactcttgacgataatttacttgagatagttatggattcactggaa
aaaattcacaataaaagattgtcaataggaataataagtcatctggaatcaattaaagac
agagttccggtaaagcttgttgttactccggcagaagctggaattggaggaagcagggtt
aaaatagaatag
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