Clostridium tyrobutyricum: CTK_C28550
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Entry
CTK_C28550 CDS
T04331
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ctyk
Clostridium tyrobutyricum
Brite
KEGG Orthology (KO) [BR:
ctyk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ctyk03016
]
CTK_C28550 (truA)
Enzymes [BR:
ctyk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CTK_C28550 (truA)
Transfer RNA biogenesis [BR:
ctyk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CTK_C28550 (truA)
Prokaryotic type
CTK_C28550 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
SGBP_B_XBD
Motif
Other DBs
NCBI-ProteinID:
AND86095
LinkDB
All DBs
Position
complement(2862946..2863680)
Genome browser
AA seq
244 aa
AA seq
DB search
MKNIKLVIEYDGTNYSGWQRQKNAMTIQEKLEMAIQKSTGKYCNTIGCSRTDSGVHARQF
TCNFLTDSKIPSSKFKMVLNSQLPEDIVVLKSEEVDINFHSRYNTIGKEYSYTIIIGNNR
PAIGRNYIYYFQRRLNIDNMKTACKFFIGKHDFSAFKSNGSSAKTSVRTIKKFTVSKQEN
LIKFIVTGDGFLYNMVRIMVGTLLEVGVGRFSPEYVLDILRSKDRSKAGKPAPARGLCLE
KVFY
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatatcaagcttgttattgagtatgatggaacaaattactcaggttggcaaagg
caaaaaaatgctatgacaatacaggaaaagttagaaatggcaattcagaaatcaacaggt
aagtattgtaatactataggatgcagcagaacagattcaggagttcatgcaagacaattt
acatgcaattttttaactgacagtaagataccatcatctaagtttaaaatggttttaaac
tcacaattgccagaagatatagtagtattaaaatctgaagaagtagatattaattttcat
tctagatataatactataggtaaagaatatagttatactattataattggtaataatagg
cctgcaattggaagaaattatatatactattttcaaagaagattaaatattgataatatg
aaaactgcatgtaagttttttataggaaagcatgacttttcagcatttaaatctaatgga
agttctgccaaaacatccgttagaacaataaaaaaatttactgtttcaaaacaggaaaac
ttaataaagtttattgttactggagatggatttttatataatatggttagaattatggta
ggtacgttattggaagttggagttggaagatttagccctgagtatgtacttgatatatta
agatctaaagataggtcaaaagcaggaaaaccagctcctgctagaggactatgtctagaa
aaagttttctattga
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