Clostridium tyrobutyricum: CTK_C29140
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Entry
CTK_C29140 CDS
T04331
Name
(GenBank) DNA repair protein radA
KO
K04485
DNA repair protein RadA/Sms
Organism
ctyk
Clostridium tyrobutyricum
Brite
KEGG Orthology (KO) [BR:
ctyk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctyk03400
]
CTK_C29140
DNA repair and recombination proteins [BR:
ctyk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CTK_C29140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
RecA
ABC_tran
AAA_14
nSTAND3
AAA_16
Lon_C
NTPase_1
AAA_22
ATPase_2
GvpD_P-loop
AAA
AAA_24
Rad51
SLFN-g3_helicase
divDNAB
ResIII
ATP-synt_ab
AAA_29
Zn_ribbon_NrdR
Elong_Iki1
TK
NACHT
DUF7125
HypA
Viral_helicase1
NPHP3_N
zf-C3HC4_2
Motif
Other DBs
NCBI-ProteinID:
AND86154
LinkDB
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Position
complement(2907413..2908780)
Genome browser
AA seq
455 aa
AA seq
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MPKIKTIFVCQDCGYESLKWMGKCPNCSEWNTMVEETKISNKKNDIKRVSVISSNNEPRN
INKIKSGEYERYNTGINELNRVLGGGIVRGSLTLISGAPGIGKSTLLLQTANNIAKKYGK
VLYVSGEESEEQIKMRGDRLGVLSDNLYVISETDLSKIESHIENSNSIFVVIDSIQTLFK
DTVSSAPGSVSQVRECANDIMRIGKTRNISFFIVAHITKQGELAGPRVLEHMVDTVLSFE
GERTEEFRILRTVKNRFGTTSEIGVFEMRQKGLLEILNPSQVFLEDTNFQKEGSIVIGVM
EGTRPILIEIQALASRTKAVMPRRTAVGVDNSRLNLILAVLEKKLKIPFYNCDVYVNVVG
GLEIEGTFGDLGLALSLVSSVKSLETKLKNLLVIGEIGLTGEVRPVSFCDRIVSEGKKMG
FKNMLIPIRNKGKIKDNDINIIGVSSLKEALNKVF
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
gtgccaaaaattaagactatatttgtatgccaggattgtggatacgaatcactaaaatgg
atggggaaatgccctaattgtagtgagtggaatactatggttgaagaaactaaaatttca
aataagaagaatgatataaaaagagtatctgttattagtagtaataatgaaccaagaaat
attaataaaataaaatctggtgaatatgaaagatataatactggaataaatgaattaaat
agagtattaggtggtggaatagtaaggggatcgcttacacttatatctggagctccaggg
ataggaaaatctactcttcttcttcaaacagctaacaatatagcaaaaaagtatggtaaa
gtgctttatgtctcaggagaagaatctgaagaacaaataaaaatgaggggagacagatta
ggagtattatctgataacctttatgtaatttctgagactgatttgagtaaaatagaatct
catatagaaaatagtaattccatttttgtagtaatagattcaatacaaacactatttaaa
gatactgttagttcggcaccgggaagtgtgtctcaggttagagaatgcgcaaatgacatt
atgcgtataggaaagacaagaaatatatcattttttatagtggctcatattactaagcaa
ggagagctagcaggtcctagagtgcttgaacatatggtagatacagttctctcatttgag
ggtgaaagaacggaagagtttagaatattaagaacagttaaaaatagatttggaactaca
agtgaaattggagtatttgagatgaggcaaaaaggtcttttagaaatattaaatccttct
caagtatttttagaagatactaattttcaaaaagaaggttcaatagttataggtgtaatg
gaaggaacaagacctatacttatagaaattcaggcacttgccagcagaactaaagccgtt
atgccaagaagaactgctgttggagtagataattccagattgaatttaattttggcagta
ttggagaaaaaattaaaaataccattttataattgtgatgtttatgtaaatgttgttggt
gggcttgaaatagaaggaacctttggagatctaggtcttgcactttcacttgtatcaagt
gtaaaatctttggaaacaaaattaaaaaatttattagtaataggagaaattggacttaca
ggagaggtacgcccagtatcattttgtgatagaattgtaagtgagggcaaaaaaatggga
ttcaaaaatatgttgatacctattagaaataaggggaagataaaagataatgatataaat
attattggtgtatcatcacttaaggaagcattaaataaagttttttga
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