Clostridium tyrobutyricum: CTK_C29410
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Entry
CTK_C29410 CDS
T04331
Symbol
hbs
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
ctyk
Clostridium tyrobutyricum
Brite
KEGG Orthology (KO) [BR:
ctyk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ctyk03032
]
CTK_C29410 (hbs)
03036 Chromosome and associated proteins [BR:
ctyk03036
]
CTK_C29410 (hbs)
03400 DNA repair and recombination proteins [BR:
ctyk03400
]
CTK_C29410 (hbs)
DNA replication proteins [BR:
ctyk03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CTK_C29410 (hbs)
Chromosome and associated proteins [BR:
ctyk03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CTK_C29410 (hbs)
DNA repair and recombination proteins [BR:
ctyk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CTK_C29410 (hbs)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
DUF5723
Arm-DNA-bind_4
Motif
Other DBs
NCBI-ProteinID:
AND86179
LinkDB
All DBs
Position
complement(2946387..2946662)
Genome browser
AA seq
91 aa
AA seq
DB search
MNKSELIASISEKSNLTKKDAEAALKGFIQSVEDTLEQGDKVQLVGFGTFETRKRAARIG
RNPRTKEEITIPESTVPVFKAGKEFKDKVNK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaatcagaattaattgcaagtatatcagaaaagtcaaatttaactaaaaaagat
gcggaggcagctttgaagggttttatacagagtgttgaagatacacttgaacaaggtgat
aaagtacaattagtaggatttggaacatttgaaacaagaaaaagagctgcaagaattgga
agaaatccaaggactaaggaagaaataactataccagaatcaacagttccagtatttaag
gctggcaaagaatttaaagataaggtaaataagtaa
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