Cotesia typhae: 141524318
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Entry
141524318 CDS
T11099
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
ctyp Cotesia typhae
Pathway
ctyp03018
RNA degradation
ctyp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ctyp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141524318
09123 Folding, sorting and degradation
03018 RNA degradation
141524318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctyp03019
]
141524318
03041 Spliceosome [BR:
ctyp03041
]
141524318
Messenger RNA biogenesis [BR:
ctyp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
141524318
mRNA degradation factors
5'-3' decay
Lsm complex
141524318
Spliceosome [BR:
ctyp03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
141524318
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
141524318
NCBI-ProteinID:
XP_074094233
LinkDB
All DBs
Position
Unknown
AA seq
96 aa
AA seq
DB search
MASGLESYVNHTVSIITSDGRNFVGTLKGFDQTINLILDDSHERVYSMTQGVEQVVLGLH
IIRGDNVAIIGELDDDVDSKLKLRSIRAEPLSAVTH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaggacttgaaagctatgttaatcatactgtatctataatcacgtcggatggc
agaaattttgttggaacattaaaaggatttgatcaaactattaatttaattctcgatgat
tcacatgaacgagtttatagtatgacacaaggtgtcgagcaagttgttttgggtctccat
ataatacgaggcgataatgtagcaataatcggagagttggatgatgatgtcgattctaaa
ctaaagcttagatcgatccgtgcagaacctctaagcgctgtaacccattaa
DBGET
integrated database retrieval system
