Cotesia typhae: 141525247
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Entry
141525247 CDS
T11099
Symbol
U4-u6-60k
Name
(RefSeq) U4-U6 small nuclear riboprotein factor 60K
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
ctyp Cotesia typhae
Pathway
ctyp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ctyp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141525247 (U4-u6-60k)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ctyp03041
]
141525247 (U4-u6-60k)
Spliceosome [BR:
ctyp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
141525247 (U4-u6-60k)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
WD40_Gbeta
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
PRP4
NBCH_WD40
Beta-prop_Aladin
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_WDR41
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
Ge1_WD40
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_NWD2_C
WD_LRWD1
WD40_like
Nbas_N
WDR54
DUF7899
Motif
Other DBs
NCBI-GeneID:
141525247
NCBI-ProteinID:
XP_074095746
LinkDB
All DBs
Position
Unknown
AA seq
526 aa
AA seq
DB search
MTMSDDEDLVYVRKSKTVHYGSLEDSERARLAAEASDDTKDSPEAGSTVPSSALALQGNV
HVSNEYLELEDEMSKDKQALLEEFERRKKARQINVSTDDSEVRRTLRVLGEPICLFGEGP
ADRRARLRELLASRGEDVIKKKHDDDDKHVRPLEREMETTWYHEGPESLQIARAWIAEYS
LRRAGARLQRAREDLALPGATRTAHQQELLRKLQSLSTYCSQVGDTRPISSCQFSPDSKI
LATSSWSGTCKLWSVPDCGLLRTLNGHTRLAGCIVFHPKATISEEVVGPIAGSTCVLASC
DADGKVNLWAGGSGDKPLADLEGHDKRVSRIAFHPSGRFLGTCCHDASWRLWDLEQQEEV
LHQEGHAKAVHCISFQVDGSVAATGGHDAFGRVWDLRTGRCIMFMDGHSKSIFGIDFSPN
GFQIVTASDDNTCKIWDLRKRTCLYSIPAHTNLLSDVKFQKGDGHYLVTASYDNTAKIWS
NKTWQPLKTLQGHDGKVMAVDVSADQKYIATSSYDRTFKLWAPENL
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgtctgacgacgaagatctggtgtacgtccgtaaatccaagacagtccactat
ggatccctggaagacagcgagcgcgctcgactggccgcagaagcatcggacgacacgaaa
gactcgccagaggccggttcaacagtcccatcatcagcgttagctcttcaaggaaatgtt
cacgtgtcgaacgagtacctagaattagaagatgaaatgtcaaaggacaagcaggctttg
ctcgaagaattcgagcgtcgaaaaaaagcaagacagataaacgtatcaacagacgattcc
gaggtacgtagaacccttcgagtcctaggtgagccgatctgtctcttcggggagggtcca
gcagaccgtcgcgctcgattaagagagctgctagccagccgcggggaagatgtaataaaa
aagaagcacgatgacgatgacaaacacgtccgaccccttgaacgcgagatggagaccacc
tggtaccatgaaggtccagaatctttacagatagctcgcgcttggatcgctgagtactct
ttgaggcgagcgggagcaagattgcagcgtgcgagggaagatttggcgcttccaggcgcc
accagaaccgcgcaccagcaggagctcctgaggaagctccagagtttgtcaacctactgc
tcccaggttggagacacgcgtcccatatcttcctgccagttcagtccagactctaaaatt
cttgccacttcttcctggtctggaacctgcaagctctggtcagttcctgactgtggactc
ctgaggacgctcaatggacacaccaggttggctgggtgcatagttttccaccccaaggcg
accatctctgaggaagtcgtcggaccgattgctggctcgacttgcgtcctggccagctgc
gacgccgacggtaaggtcaatctctgggcaggtggctcgggggacaagcctctggctgac
ctggagggccacgacaaacgcgtctccaggatcgcgtttcatccctccggcaggtttctg
ggcacttgctgccacgatgcttcctggaggctctgggacctggagcagcaggaggaagtt
cttcatcaggaaggccacgcaaaagctgtccactgcatcagctttcaggttgacgggagt
gttgctgctactggaggccacgacgcctttggccgcgtctgggatttgaggaccggcagg
tgtatcatgttcatggacggacactccaagagcatcttcgggattgatttttctccgaac
gggttccagattgtcactgccagtgatgataatacttgcaagatttgggatttgagaaaa
cggacttgcttgtactcgattccagctcacactaatctcctttccgatgttaagtttcag
aagggggatggacactatttggtgactgcgtcttacgacaatacggccaagatctggtcg
aacaaaacttggcagcctctgaagactcttcaagggcatgatggaaaagttatggcggtt
gatgtctctgcggatcagaagtatattgctactagctcttatgatcgaacatttaagctc
tgggctcctgagaatttgtaa
DBGET
integrated database retrieval system
