Cotesia typhae: 141527187
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Entry
141527187 CDS
T11099
Name
(RefSeq) putative ATP-dependent RNA helicase DDX55 homolog
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
ctyp Cotesia typhae
Brite
KEGG Orthology (KO) [BR:
ctyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ctyp03009
]
141527187
Enzymes [BR:
ctyp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
141527187
Ribosome biogenesis [BR:
ctyp03009
]
Eukaryotic type
Pre-60S particles
Helicases
141527187
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
CTT_SPB4
ResIII
RNA_pol_3_Rpc31
Cas3-like_C_2
RR_TM4-6
Motif
Other DBs
NCBI-GeneID:
141527187
NCBI-ProteinID:
XP_074098632
LinkDB
All DBs
Position
Unknown
AA seq
595 aa
AA seq
DB search
MADNKQKWRDLNITLSSTILKTLKQLGFKHPTPIQSACIPILLNGKDVAAEAVTGSGKTL
SFLIPLLEILQKRNEEWKTTEIGGIIISPTRELATQISEVLDKFLINIPKLKQILLVGGT
TVKEDAIKLKKGAHIIIATPGRLEDIFSNCKDVDLGKAVKSLELLVLDEADRLLDSGFSK
AINTILSHLPRLRRTGLFSATQTKEVQQFIRAGLRYPIIITVTEKSSVSTPALLNNYYAI
VEPDQKFATLVNFIKSTGINRKYMIFFSTCACVDYFSDVLKLMFPGGNIFSLHGKLKGRR
KKIFDDFHKIDSGILICTDVMARGIDIPEVDWVLQYDPPSSASNFVHRCGRTARIGHNGN
ALLFLLRTEDAYIEFIKRNQKVELDQMNFDNSIDELVQQCLKTMRNLQLSDRLLFDKANC
AFVSYIQSYSKHECYLILSLKDLDLGLTAMGFGLLRMPRMPELKNRNLSSFIEVDVDTNS
IKYKNKQREEKRLENLEIYRKTGKWPSNVKRRMKNTVSWSETKKKKTEKQDKCIVKKEKK
SKKGKTDESGKLKKRKASMQEILDELSVYAKENALMKKLKKKKISQEDFDEAVDM
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggctgataataaacaaaagtggagagatttgaacatcactttgagtagtacaatatta
aaaacattgaaacaacttggatttaaacacccaactccaatacaatcagcttgtattcct
attttattgaatggaaaggatgttgcagcagaagctgtcacaggaagtggtaaaacttta
tcatttcttatcccattgctagaaatattacagaaaagaaatgaagagtggaaaactaca
gaaatcggtgggataataatttcgcccacaagagaattagctactcaaataagtgaagta
ttagataagttcctgataaatattccaaaattaaaacaaattttactagttggtggaaca
actgtaaaagaagatgctataaagttgaaaaaaggtgcacatattataattgccactccg
ggaagattagaagatattttttctaattgtaaagatgttgatttagggaaagcagtcaaa
tcattggaattattagtattagatgaagctgatagactattggattctggattttcaaaa
gcaataaacacaatcttaagtcatttgcctcgtttacgacgaactgggttattttctgca
acacaaacaaaagaagtgcaacaatttattcgagcaggcttaagatacccaataataata
actgttactgaaaaatctagcgtttcaacacctgcattattaaacaattattatgctatt
gttgagcctgatcagaagtttgcaactttagtgaattttattaaatcaacgggtattaat
cggaagtatatgatatttttttctacatgtgcttgtgtagattatttcagtgacgtatta
aaattaatgttccctggtggaaatatattttctcttcacggaaaattaaaaggccgaaga
aagaaaatatttgatgattttcataaaattgacagtggtattcttatctgtactgatgta
atggctcgaggaattgatattcctgaagtagattgggttctgcagtatgatccaccatcc
tctgcaagtaactttgtacatcggtgtggcagaactgcacgaatcggtcataatggaaat
gcactactctttcttttacgtactgaagatgcttacattgaatttattaaacgaaatcaa
aaagtagaattggaccaaatgaattttgataattcaattgatgaacttgttcaacaatgt
ttgaaaactatgagaaatttacagctcagtgataggcttttattcgataaagctaattgt
gcttttgtttcatacatacaatcgtacagtaaacatgagtgttatttaattttaagctta
aaagatttagatctcggtctgacagctatgggttttggtcttttacgaatgccgcggatg
ccagaactaaaaaatcgaaatttatcgtcttttatagaagttgatgttgatactaattct
attaaatacaaaaataaacaaagagaagaaaaacggttggaaaatcttgaaatttatcgt
aaaactggcaaatggcccagtaatgtaaaacgacgtatgaaaaatacagtgtcttggtct
gaaacgaagaaaaagaaaactgaaaaacaggataaatgtattgtgaagaaagagaaaaag
tctaaaaaaggaaaaaccgatgaatctggtaagctcaaaaaacggaaagcatctatgcaa
gagattttagatgaattatctgtttacgctaaagaaaatgcattgatgaagaaattaaag
aaaaaaaagatatcacaagaagatttcgatgaagctgtagacatgtaa
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