Cotesia typhae: 141529463
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Entry
141529463 CDS
T11099
Name
(RefSeq) ATP-dependent RNA helicase p62
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ctyp Cotesia typhae
Pathway
ctyp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ctyp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141529463
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ctyp03041
]
141529463
03009 Ribosome biogenesis [BR:
ctyp03009
]
141529463
Enzymes [BR:
ctyp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
141529463
Spliceosome [BR:
ctyp03041
]
Complex A
U1 snRNP components
U1 related factors
141529463
Complex B
141529463
Ribosome biogenesis [BR:
ctyp03009
]
Eukaryotic type
Pre-60S particles
Helicases
141529463
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_30
ERCC3_RAD25_C
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
141529463
NCBI-ProteinID:
XP_074102097
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MTYSGASSGGGGFRSGGSGKGGAVQRSSGPTRNGFGGGGGNRFGGARGGNTGGSNGRFGN
RGNSNNPKTAGNTLKKPNWDYENLKPFKKDFYVPHSNVSKRNYREIDSFRQEKEITLKGE
EIPDPIQSFDEGNFPDYVMEGIKRQGFTEPTAIQSQGWPIAMSGRNMVGIAQTGSGKTLG
YILPAIVHINNQQPLNRGDGPIALVLAPTRELAQQIQTVANDFGSLSYVRNTCIFGGAPK
GSQARDLERGVEIVIATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIE
QIRPDRQVLMWSATWPKEVRMLAEEYLVDYTQLNIGSLSLCANHNILQIVDVCQEHEKET
KLGSLLQEIGNVNDDGGKTIIFVETKKKVENITRNIRRYGWPAVCMHGDKSQQERDYVLR
EFRNKKGSILVATDVAARGLDVDDVKYVINFDYPSSSEDYIHRIGRTGRSQATGTSYAFF
TPQNSRQAKDLINVLKEANQVINPKLSELASKSGGHGGGYGQRSRWGYGGGRGGGRENNF
SGVHKRFEDRSNNYNNYS
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgacttacagtggtgcatcatctggtggtggtggattccgcagtggtggatcgggaaaa
ggcggagctgttcagcgtagcagcggaccgacgcgtaatggttttggaggtggaggtggt
aataggttcggcggagcacgaggtggaaacactggtggatccaatggacgctttggaaac
cgtgggaactcgaacaaccctaaaactgctggcaacaccctcaaaaaacctaactgggat
tatgaaaatctgaaacctttcaagaaagatttctacgtcccacactcgaatgtttccaag
cgaaactaccgtgagatcgattctttcagacaagaaaaagaaattaccctcaagggagag
gaaattccagacccaatccagtctttcgatgaaggcaacttcccggattacgtaatggag
ggaattaagagacaagggttcaccgagccgacggctatccagtcccaaggttggcccatt
gcgatgtccggccgcaacatggtcggtattgctcaaacaggatccggaaagacgcttgga
tacattttacctgccatcgttcacatcaacaatcagcaacctctgaaccgtggagatgga
cccatcgccctggtactcgcacccaccagagaattggcccagcagatccagacagtcgct
aatgattttggatctctgtcttatgtaaggaacacatgcatattcgggggagctcccaag
ggtagccaagctcgtgacctggaacgtggtgttgaaattgttattgccacacctggaaga
cttattgatttcctcgagcgcggcacgaccaatctgcgcagatgcacgtacttggtgctc
gatgaggctgaccgtatgttggacatgggattcgaaccacaaattagaaaaattatcgag
caaatcagacctgacagacaagtacttatgtggtctgctacgtggccaaaggaagttaga
atgttggctgaggaatacctcgttgactacacccaattgaacattggatctctctcgctg
tgtgcaaaccacaacattctgcaaattgttgatgtatgccaagaacatgaaaaagaaaca
aaattaggatctttgctccaagaaattggtaatgttaatgatgacggtggaaaaacaatt
atcttcgtagaaactaagaaaaaagttgaaaatattacaagaaacataagaagatacggc
tggccggccgtgtgtatgcatggagacaaatcacagcaagaacgtgattatgttcttaga
gaattcagaaacaagaaaggttcgattcttgtagcaacagacgttgctgctcgtggactt
gatgtcgatgatgttaagtatgtgatcaacttcgactatccatcctcgtcggaggattac
attcatagaattggaagaactggacgttctcaagccaccggaacgagttacgctttcttt
acgccacaaaacagtcgacaggctaaagatttaataaacgtactcaaagaagctaaccaa
gtcatcaaccccaagctgtccgagctcgctagtaaatccgggggacatggaggtggatac
ggacaaagaagtcgttggggctacggtggaggacgtggaggtggacgagagaacaacttc
tccggagtacacaaaagattcgaagacagaagcaacaactacaacaattacagttga
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