Cotesia typhae: 141530637
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Entry
141530637 CDS
T11099
Symbol
Tst
Name
(RefSeq) superkiller complex helicase subunit twister
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
ctyp Cotesia typhae
Pathway
ctyp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctyp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
141530637 (Tst)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctyp03019
]
141530637 (Tst)
Enzymes [BR:
ctyp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
141530637 (Tst)
Messenger RNA biogenesis [BR:
ctyp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
141530637 (Tst)
mRNA degradation factors
3'-5' decay
Ski complex
141530637 (Tst)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
Ski2_N
DEAD
ResIII
MTR4_beta-barrel
Helicase_C
DEXQc_Suv3
ATPase_2
MTR4-like_stalk
Reovirus_L2_N
DUF922
EGF_alliinase
Motif
Other DBs
NCBI-GeneID:
141530637
NCBI-ProteinID:
XP_074103958
LinkDB
All DBs
Position
Unknown
AA seq
1212 aa
AA seq
DB search
MSLSTEEILTEVCGAPPILPDIRDELCEYIECPEKLPIHQVENVQLYWPREPNILSLLEY
DLSPLGTVLKYDRDPITGRITHMREDVLLGAGENAKNSMSMSRAPGPPMEGVQGNSSNFP
FWPGGFDEPDVLKTVSASNLDLENNLRTLAKGFLAGVEFASDNCTPKDNAKDEPKNHHKK
KPKAKLEKVNLMAMVNEEGNKLGLWSSSNSTEMEEIKKFDDTAANLEEIDDLVINESHIP
VLKLVEKPKSILAEWAEQLDVSVPVPDFDKRVPKPAITFDYELDTFQKQAIIKLEEGCNV
FIAAHTSAGKTTVAEYAIALSQRHMTRVIYTSPIKALSNQKYRDFKRNKHFESIGLVTGD
IQINQTANCLIMTTEILQTMLYNASEVLRDLEYVIFDEVHYINDENRGHVWEEIVILLPP
NVNIVMLSATVPNPLIFANWVGNIKKRKTFVISTLKRPVPLKHYLYTGTDGKTRNDRFLV
LDGEGQFNLDTWYKVKQLKDSKKPKNQDVKNINKRIQLTPKQEKTMWEAFIAHLKEHEKL
PVVIFTLSRNRCDMNADSLTSVCLTTETEKGHVRAFFKKCIKRLNDADRELPQIKRMESL
LERGIGVHHSGILPILKEIIELLFQNGVVKLLFATETFAMGINMPARTVVFDSIRKFDGK
QFRGLLPTEYIQMAGRAGRRGHDKSGTVIIMCKTEIPHFMDLKAMMCGEPQNLQSQFKIT
YSMVLNLRRVSESVSVEDMMRRSFKELSLITNTTKRKTELIEVEEALAKLPPETEFQKQL
SEFYKLAMEYIVDWIKLSPHLFQGKKVTKALIPGKILIISYRHHYYKLAVLLSVNQKKTE
SEYNVLCLKNSNGSQEKLNKPENWYRILSLTKRTIFVPEGVPSHALLTIKSEHINEITNC
MIGADCSLVLKDCEKRKISRFQNDPPSPSCQAALQDLMSMSLMASQNTGILKPYVEASVS
HPDHVARSKYLAMLEKQIVQSKVSKMPNLEQHFEAVFERNELEQRLHDLQFQLSDESLAL
YPEYVNRVQVLKTLGYIDVDDRVTLKGRVALDMGTHELLITELVYRNILTNLQPAEIAAL
LSALVFQQKMDNDPEPKLAVLKETMKTIISIRQEIETIELQYGMETVEPLNFGLVEVVYE
WAREEPFAKIMELTEVQEGIIVRCIQQLNDTLKDVKTAANRIGETVLKEKMEEASTAIKR
DIVFTASLYTQD
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgagcttatcgacagaggaaattttgactgaggtttgtggtgcgccaccaattttgccg
gacatcagagatgaattatgcgagtacatcgagtgcccggaaaaactaccaatccaccag
gtggaaaatgtccagctgtactggccccgagaacccaatattttgtcacttctggagtat
gatttgtcaccactcggtacagtgttaaaatatgaccgggacccaattactggacggatt
acccacatgcgcgaggatgtccttctgggagccggcgaaaatgccaaaaactcgatgtca
atgtcgcgagcacctggtccaccaatggagggcgttcaaggtaattcgagtaactttccg
ttctggccgggtggatttgacgaaccagatgtactcaagacagtctcggcatcgaacctg
gatctagaaaataatttacgtactttagcaaaaggattcctagctggtgttgagtttgca
agcgacaattgcactcccaaagacaacgccaaagacgagccgaaaaaccatcacaagaaa
aaacccaaagccaaactagaaaaagtcaatttaatggcgatggtcaacgaggaaggcaat
aaactaggtctctggtcgtcttctaattcaacagaaatggaggagattaaaaaattcgac
gacactgctgcgaatctcgaagagattgatgatctcgtgatcaacgaatcgcacattccg
gtgctaaaactcgtcgagaaaccaaaatcaatactagcagagtgggctgagcagctggac
gtttcagtacctgttccggatttcgacaagcgtgtgccaaaaccagccatcactttcgac
tacgagctagacaccttccaaaagcaagctatcatcaagctggaagagggctgtaatgtg
tttatcgctgctcatacttctgctggtaaaacaaccgttgctgagtacgcaattgcatta
agtcaaagacacatgacgcgtgtaatctacacttcgccaataaaagccttgtccaatcaa
aagtaccgagactttaagcgcaacaagcactttgagagcatcggtttagtaactggagac
attcaaataaatcaaacagctaattgtttgattatgacgactgaaattcttcaaacaatg
ttgtacaatgcatccgaggtgctgagagatcttgagtatgttattttcgatgaagttcat
tatataaatgacgagaaccgtgggcatgtttgggaagaaattgtaattcttctaccgcct
aatgtcaatattgtcatgctgtcagcgacagttccaaacccgctgatattcgccaattgg
gttggtaatataaagaagcgaaaaacgtttgtaataagcactcttaagcggccggtaccg
ctgaaacattatctgtacactggaactgacggcaagacacgtaacgacaggttcttggtg
ttggatggagaaggccagtttaatttagacacctggtacaaagtgaaacagctgaaggat
tcgaagaagccaaaaaatcaagacgttaagaatatcaacaagagaatacaattgacacca
aagcaggaaaaaacaatgtgggaagcttttatagctcatttaaaagagcacgaaaagtta
ccagtagttattttcactttgtcgagaaatcgatgtgacatgaacgcagattctttgacg
tcggtctgcttgacgactgagaccgagaaaggacacgtgagagctttcttcaaaaagtgt
atcaaacgtttgaacgacgcggatcgggagttgcctcagatcaagcggatggagagtctc
ttggagcgaggcatcggggttcaccacagtgggatcctgccgattttgaaggagataatc
gaattgctgttccaaaacggagtggtgaagctattgtttgctactgagacttttgcgatg
ggtattaacatgccagctcggactgttgtttttgattcgatacggaaatttgatgggaaa
caattccgtgggctgctgcctacggagtatattcagatggccggacgtgctggtcgtcga
ggacacgataagtcgggtaccgtaataataatgtgcaagacagagataccgcattttatg
gacctgaaagcgatgatgtgcggcgaaccgcagaacctacagtctcagtttaaaataact
tactctatggtactgaacttgagacgagtcagtgagtcggttagtgtcgaggatatgatg
cgcagatcattcaaagagctgtcgctgattacaaataccaccaaacggaagactgagctg
atcgaggtggaagaagcgctggcgaagcttccaccagagactgaatttcagaaacaattg
tccgagttttataaactcgctatggagtatatcgttgactggataaaactcagcccgcat
ttgttccaagggaagaaagtcaccaaggctttgattcctgggaaaatactgatcatatca
taccgacaccactattacaagctagctgttctgctgagtgttaaccagaagaagacagag
agcgagtacaacgtgctgtgtcttaaaaattcaaacgggtctcaagaaaaattgaacaaa
ccggaaaactggtaccggatactatcactgaccaagaggactatttttgtacctgaaggc
gtaccgtctcacgcacttttgacgatcaaatccgagcatatcaatgaaattaccaactgc
atgattggcgctgattgtagcttggtcctgaaggattgtgagaaacgcaaaatctcgcgg
ttccagaacgacccgccgagtccgtcgtgtcaagcagctcttcaggatctgatgtcgatg
tcgctgatggcaagccagaatacaggaatcttgaagccttatgtcgaggccagtgtgtcc
catccagaccacgtcgctagatctaaatatctggcgatgttggagaagcagattgtccag
agcaaggtgtctaagatgcctaatttggagcagcactttgaagcagtcttcgaacgcaac
gagcttgaacaacgtctacatgatttgcagttccaactaagtgatgaaagtctggcactt
tatcctgagtacgtgaacagagtccaagttttgaagaccctggggtacatcgatgttgat
gacagagtaactttgaaaggtcgagtggcgttagacatgggcacccatgaattattgata
acagaattggtttatcggaatattttaacgaatctacagccagctgaaatagctgcttta
ttgtctgctctagtgttccagcaaaagatggacaatgatccggagcctaaattagcagtg
ctaaaagagacaatgaaaacaataatcagcattcgtcaagagatagaaactatagaactt
cagtatggaatggaaactgtcgagccacttaatttcggtctggtggaagttgtttatgag
tgggctcgagaagaaccgtttgccaaaataatggaacttacagaagtccaagaaggtatt
atagtccgctgcatccagcaattaaacgacacactgaaggatgttaaaacagcggcaaat
agaatcggtgaaactgttttaaaagaaaaaatggaggaagcttcaacggctatcaagcgt
gacattgtcttcacggcttccctttacacccaggattag
DBGET
integrated database retrieval system
