KEGG   Cotesia typhae: 141530783
Entry
141530783         CDS       T11099                                 
Symbol
Rrp42
Name
(RefSeq) exosome complex component Rrp42
  KO
K12589  exosome complex component RRP42
Organism
ctyp  Cotesia typhae
Pathway
ctyp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ctyp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    141530783 (Rrp42)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ctyp03019]
    141530783 (Rrp42)
Messenger RNA biogenesis [BR:ctyp03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     141530783 (Rrp42)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     141530783 (Rrp42)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 141530783
NCBI-ProteinID: XP_074104199
LinkDB
Position
Unknown
AA seq 290 aa
MENPLSLAEKTFILHGVDADLRIDGRRQCEYRSIEIETKLMPQTNGSARLKIGNTDVLVG
VKVEVDTPFPDRPYEGKLEFFVDCSANAAPEFEGKGGDDLATEISNVLTNTYQSQKTFNL
KFLSILPHKKCWKMYVDVLILQCGGNLYDAIGAAIKAALFNTELPRVTAATLDGGEADLQ
VSDDPFDCVTLNVESFPVLVTLCKIGDNCIVDPIAEEEACAAASVVLSVIPSGEITSVVK
TGYGSLQPATFIKTLQTGIAVGKKLNESLMDALKKEQSLGPKRPIVSFLR
NT seq 873 nt   +upstreamnt  +downstreamnt
atggaaaatccattaagtttagctgaaaagacatttattcttcacggtgtagatgcagat
ttgaggatagatggacgtcgtcaatgtgagtaccggtcaattgagattgagacaaaatta
atgccacaaacaaatggatcagcgcgattaaaaattgggaataccgatgtgctcgtaggt
gttaaggttgaagtggatactccatttcccgatagaccttatgaggggaaactggagttc
tttgttgattgttctgctaacgcagccccggagtttgaaggtaaaggcggagacgatttg
gctacagagatcagcaatgtactgacaaacacttatcagtcacagaaaacatttaatctt
aaatttttgtcaatattaccacataaaaaatgctggaaaatgtatgttgacgttttgatt
ttacaatgtggtggaaatttatatgacgctattggagctgcaataaaagctgctttattt
aatacagagcttccaagagtgacagctgcaacattggatggtggagaagctgacctgcaa
gtctctgatgacccatttgactgcgtcactttgaatgttgaatcttttccagtgctcgtc
acattatgcaaaataggtgataattgtattgtagaccccatagctgaagaggaagcttgc
gcagcagctagtgtggttttatcagtaattccttcaggagaaatcacgtcagttgtaaaa
acaggatatggaagtcttcaaccagctacgtttataaaaactttgcagactggaattgct
gtaggaaaaaaattaaatgaatcattaatggacgctctaaaaaaagaacaatcactggga
cctaaaagaccaatcgttagttttctacgttag

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