Cotesia typhae: 141531028
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Entry
141531028 CDS
T11099
Symbol
Gnf1
Name
(RefSeq) germ line transcription factor 1
KO
K10754
replication factor C subunit 1
Organism
ctyp Cotesia typhae
Pathway
ctyp03030
DNA replication
ctyp03410
Base excision repair
ctyp03420
Nucleotide excision repair
ctyp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ctyp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
141531028 (Gnf1)
03410 Base excision repair
141531028 (Gnf1)
03420 Nucleotide excision repair
141531028 (Gnf1)
03430 Mismatch repair
141531028 (Gnf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ctyp03032
]
141531028 (Gnf1)
03400 DNA repair and recombination proteins [BR:
ctyp03400
]
141531028 (Gnf1)
DNA replication proteins [BR:
ctyp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
141531028 (Gnf1)
DNA repair and recombination proteins [BR:
ctyp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
141531028 (Gnf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA
AAA_lid_RFC1
BRCT
PTCB-BRCT
RuvB_N
BRCT_2
AAA_22
Rad17
AAA_30
AAA_33
nSTAND3
AAA_17
AAA_14
AAA_5
RNA_helicase
FERM_F2
NTPase_1
AAA_18
AAA_16
AAA_19
DUF1824
Motif
Other DBs
NCBI-GeneID:
141531028
NCBI-ProteinID:
XP_074104598
LinkDB
All DBs
Position
Unknown
AA seq
1011 aa
AA seq
DB search
MSRDIRSYFSFPKGQSKNAPAAKPSKINKKPLSSDEEDSHASPNKNKAKKTKKTGNHIIS
DSEDEDTVTKKPVSKSPSTTGKDKVKEKEKELKPVTLDSIFSKEPVKRKSAPAPIPKKLK
EAEASFHDDKEFEATLSQLDTTEIETIFQNKDKTKDKEKKLDQFSGKRKPSDSDKETSPK
KIKLSEDVKTEKDKSKVKDKNSSHSKLEVEVDNKQKKKQKNDADEVYEENIAKKKQHAVA
YQQYLHRGGARNPGSKTIPKGAENCLAGLSFVVTGVLESLEREEVDELIKQYGGRVVGNL
SKKTNYLVVGDAAGESKMAKADSLHVKKISEDELLEMIRSRPAGKSSAVIPSRSKKNSSF
NKSTDDELKPSPSKKVSSEVKAQPVKSEDVEMKSVVNIRDENIFKAPISSKEASTFVASS
EKASTSKDPAAASASKIEFVGNDHVEALVEKYRPKMMKQIIGQHTDKSCARKLHAWILNW
HKNQHGKVKPPKPSPWAKNDDGAFYKAALLSGPPGIGKTTTAQVVCNELGFDLVEFNASD
TRSKRLLKEEVSTLLSNTSVKGYFSSNKEDKTSRKHVLLMDEVDGMAGNEDRGGLQELIN
LIKAADVPIICICNDRNHPKMRTLANYTFDLRFQKPKLEQIRGAMKSLCCKENISISTEN
LDRLIQSTNFDIRQVINHLAMLKGEPVEKKEGRISGDINKDLKLGPWDVVRKVFSAEEHK
NMSIHDKSDLFFHDYNIAGLFVQENYLSVVPKVPKDQILERVAKSADSLSMGDLVEQAIR
QKNAWALLPAQACYSSVIPGSLMSGHIGAQINFPSWLGRNSKRNKFDRILQEITVHTRLV
TGASKEAINIDYLNALRDKITRPLALNGTEGVDSAVDVMNHYHLLREDLDGIVEVSLWPG
QRDPFQVIDSKVRAAFTRSYNKNSTLTPFAATASKKKGGGDLTSEDSGYMEAGEETISDS
DNDDDSLEADRMVKAKKTAPKKEPAKTATKKTTSKASADKPASRRGRGRGK
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgtgacattcgatcgtatttttcatttcccaaaggacaaagtaaaaatgcaccg
gcagcgaagccgtcaaagattaacaaaaaaccgttgtcatctgatgaggaagattctcat
gctagtccaaataaaaataaagctaaaaagactaaaaaaactgggaaccatattatatca
gactcagaagacgaggatacggtgacaaaaaaacctgtctcgaagagtccatccacgacg
gggaaggacaaggttaaagagaaagaaaaagagcttaagcccgtgactcttgacagtata
ttcagcaaagaaccagtcaaacgtaaaagcgcccccgcgccgattcctaaaaaattaaaa
gaagcagaggcgagtttccacgacgacaaggagttcgaagcgaccttgagtcagttagac
acgacagaaatcgaaacgatattccaaaataaagataagactaaggataaggaaaagaaa
ctggatcagtttagcggaaaacgcaagcctagtgatagcgacaaagaaacttcgcctaaa
aaaataaaactcagcgaggatgtcaaaacagaaaaagacaagtctaaagtcaaggataaa
aattccagccattcaaaattggaggttgaagttgacaacaagcagaagaagaaacaaaag
aacgatgctgatgaagtgtacgaagaaaacatcgctaagaagaaacagcacgcggttgct
tatcagcagtacctccacagaggcggcgcgaggaaccccggctccaaaacaattcccaag
ggagctgaaaactgcttggctggtttgagcttcgtggtgactggagtcctggagtcgctg
gagcgcgaggaagttgatgagctgataaagcagtacggaggtcgcgtggttggaaacttg
tccaagaaaactaattatcttgtggtaggagacgctgctggagagtcgaagatggccaag
gccgactctttgcatgtcaaaaaaatttctgaagacgaattgttggaaatgatccgctcc
aggccagctggtaagtcctccgctgtgattcctagtcggagcaagaaaaatagcagcttc
aataagtctacagatgatgaactcaaaccttcgccttctaaaaaagtttcttctgaggtc
aaggctcagcctgttaaaagtgaagatgttgaaatgaagagtgtcgttaatattagggat
gaaaatattttcaaagctccgatttcatccaaggaagcttcaacatttgttgcaagttcg
gaaaaagcttcaaccagtaaagatccagctgcagcttcagcatcaaaaattgaattcgtt
ggtaatgatcacgttgaagctctggtagaaaaataccgaccgaagatgatgaagcagatc
attggccagcatactgacaaaagttgcgcgagaaaattgcacgcgtggattcttaactgg
cacaagaatcaacacggcaaggtcaagccacctaagccttctccgtgggccaaaaacgac
gacggagctttttataaagctgctttgctgtccgggcctccgggaattggcaagactacc
actgcccaggtggtctgcaatgaactcggcttcgacttggttgaattcaacgcctcggat
acgaggagcaagcgcctgctcaaagaagaagtctccaccttgttatcgaacaccagtgtc
aaaggctacttctccagcaacaaagaagacaagacttccaggaagcacgtgctgctgatg
gacgaagttgacggtatggctggcaatgaagaccgcggaggcctacaagagctaattaat
ctcatcaaagctgctgatgttccgatcatttgtatctgcaacgataggaaccatcccaag
atgaggactctcgcgaattatacttttgatttgaggttccagaagcctaaactagagcag
ataagaggcgctatgaagtcgctgtgttgcaaggaaaatatttcgatctctacggagaat
ttggatcgattgatccagtcgactaattttgatataagacaggttattaatcacctcgcg
atgctcaagggtgagcccgtcgagaagaaagagggaaggatttccggtgatattaacaaa
gatcttaaacttggaccctgggatgttgttcgcaaggttttcagtgctgaggaacataaa
aatatgagtattcatgataagagtgacttgttctttcatgattataatattgctgggctt
tttgttcaagaaaattatttatctgttgtacctaaagttcccaaagatcaaatattggaa
agagttgcaaaatcagctgacagtttgtcaatgggagatctagtagaacaagctattcgt
caaaaaaacgcatgggctttactaccagctcaagcttgctattcgtctgtaattcctggc
tcgctgatgtccgggcacattggtgcgcaaataaattttcccagctggcttggacgtaat
tccaagcgcaataaatttgatagaatattgcaagaaattacagttcacacgcgactggtt
actggcgccagcaaagaagcgattaatattgattacctcaatgcattgagagataaaatt
actcggccgctggcgctcaatggcactgaaggtgtcgactctgcggttgacgtcatgaat
cattaccatttactcagggaagatttagacggaatagttgaagtatctttgtggccaggt
cagcgtgatcctttccaagtgattgattctaaagtaagagccgcattcacgcgttcttat
aataaaaattcaaccttgacaccgtttgctgctacggcgagtaagaaaaaaggcggtggt
gatttaacttctgaggattcgggatacatggaagccggagaagaaactatttctgactct
gataatgacgatgatagtttagaagcagatcgcatggtcaaggcgaagaaaactgctcca
aaaaaagaaccggcaaaaactgctactaaaaaaactacctcaaaagcttcggcggataag
ccggcgagcagacgtggccgaggtcgtggaaaataa
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