Cotesia typhae: 141531141
Help
Entry
141531141 CDS
T11099
Symbol
Rpii215
Name
(RefSeq) RNA polymerase II subunit RpII215
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
ctyp Cotesia typhae
Pathway
ctyp03020
RNA polymerase
ctyp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ctyp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
141531141 (Rpii215)
09124 Replication and repair
03420 Nucleotide excision repair
141531141 (Rpii215)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctyp03021
]
141531141 (Rpii215)
03400 DNA repair and recombination proteins [BR:
ctyp03400
]
141531141 (Rpii215)
Enzymes [BR:
ctyp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
141531141 (Rpii215)
Transcription machinery [BR:
ctyp03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
141531141 (Rpii215)
DNA repair and recombination proteins [BR:
ctyp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
141531141 (Rpii215)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
EutB
DUF3137
Motif
Other DBs
NCBI-GeneID:
141531141
NCBI-ProteinID:
XP_074104786
LinkDB
All DBs
Position
Unknown
AA seq
1907 aa
AA seq
DB search
MATSDSKAPIRTVKRVQFGILSPDEIRRMSVTEGGIKFPETMEGGRPKLGGLMDPRQGVI
DRNSRCQTCAGNMTECSGHFGHIDLAKPVFHVGFITKTIKILRCVCFFCSKLLISPQNPK
IKEVVMKTKGQPRKRLAFIYDLCKTRKICEGGDEMDINKEGAEIPPTGGKQPHGGCGRWQ
PQLRRTGLDISAEWKQVNEDSQDKKIVLTAERAWEILKHITDEESFILGMDPKFARPDWM
IVTVLPVPPLSVRPAVIMYGSAKNQDDLTHKLADIIKSNNELQRNEQAGAATHIVAVNIK
MLQFHVATLVDNDMPGMPKAMQKSGKPLKAIKARLKGKEGRIRGNLMGKRVDFSARTVIT
PDPNLRIDQVGVPRSIAQNLTFPEIVTPFNIDKMQELVQRGNSQYPGAKYIVRDNGERID
LRYHPKPSDLHLQCGYRVERHIRDGDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSC
TSPYNADFDGDEMNLHVPQSMETRAEVENIHVTPRQIITPQANKPVMGIVQDTLTAVRKM
TKRDVFIEKEQMMNILMFLPSWDGKMPQPCILKPKPLWTGKQIFSLIIPGNVNMIRTHST
HPDEEDDGPYKWISPGDTKVMVEHGELVMGILCKKTLGTSAGSLLHICMLELGHDVCGKF
YGNIQTVINTWLLLEGHSIGIGDTIADPQTYIDIQKAIKKAKADVIEIIQKAHNMELEPT
PGNTLRQTFENQVNRILNDARDKTGSSAKTSLTEYNNLKAMVVSGSKGSNINISQVIACV
GQQNVEGKRIPFGFRKRTLPHFIKDDYGPESKGFVENSYLAGLTPSEFYFHAMGGREGLI
DTAVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGEDGLCGETVEFQNLPT
IKLSHKAFEKKFKFDPSNERYLRRIFTEDIVREMMGSGEVISELEREWEQLSRDRAILRE
IFPSGESKVVLPCNLQRMIWNVQKIFHINKRAPTDLSPMKVIQGVKHLLERCIIVAGDDR
LSKQANENATLLFRCLVRSTLCTKCVSEEFRLSSEAFEWLIGEIETRFQQAQVCPGEMVG
ALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGVAA
RDAEKAKNVLCRLEHTTLRKVTANTAIYYDPDPQNTVIAEDQEFVNVYYEMPDFDPTKIS
PWLLRIELDRKRMTDKKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNSEDNK
FHECDEEIADKMEDDMFLRCIEANMLSDMTLQGIETIGKVYMHLPQTDAKKRIIITDTGE
FKAIAEWLLETDGTSLMKVLSERDVDPVRTFSNDICEIFQVLGIEAVRKSVEKEMNAVLQ
FYGLYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLLDAASHAE
VDPMRGVSENIIMGQLPRIGTGCFDLLLDAEKCKQGIEIPSVIGASIMSGAGMFFGSAAT
PSMSPQMTPWNQMGATPGYGASAMSPALGSGMTPGGACFSPSGASDASGLSPAYSAYSPQ
PGSPGSPGPSMSPYPMSPAGGASPSYSPTSPAYLPTSPSMTPSSPNYSPTSPTYSPTSPN
YSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT
SPSYSPTSHSYSPTSPSYSPTSPGYSPTSPSYSPTSPGYSPAGPSYSPTSPSYSPSSPNY
TPQSRSYSPTSPSYSPSSPQYSPASPSYSPSSPKYSPTSPSYSPTSPSFAGTSPQYTPTS
PTYSPTSPTYSPTSPSYSPSSPQHTTGGSSTRYSPSSPNYSPTSPTYSPSSPQYSPSSTK
YSPTSPTYTPTSPSYSPTSPTYSPPVPGYSPTSPTYSPASPTYESED
NT seq
5724 nt
NT seq
+upstream
nt +downstream
nt
atggccacatccgactcaaaggctcctataaggactgttaaaagggttcaatttggaata
ctttctccagatgaaatccgccgtatgtctgtcaccgaaggtggcattaaatttccggaa
actatggaaggaggccgcccaaaacttggcggtctcatggatcctcgccagggtgttatc
gacaggaattcacgatgtcaaacctgtgctggcaacatgaccgagtgctctggtcatttt
ggacacattgatttagctaagccagtatttcacgttggatttatcactaaaacaattaaa
atattacggtgtgtatgttttttctgttcaaaattacttatcagccctcaaaatcctaaa
attaaagaagtagtaatgaaaacaaaaggtcaacctcgtaagagactcgcatttatctac
gacctgtgcaaaactagaaaaatttgtgaaggaggagatgaaatggacattaataaagaa
ggtgcagaaattccaccaactggaggcaaacaaccacacggtggatgtggtaggtggcaa
ccacagttgcgtaggacaggattagacatatctgctgagtggaagcaagtaaacgaagat
tcacaggacaaaaaaatagtactgactgctgaacgtgcttgggaaattcttaaacacatt
actgatgaagagtcatttatactcggaatggatcccaaatttgccagacctgattggatg
attgtcaccgtcttgccagtaccacctttgtcagtaagacctgcagttattatgtatgga
tctgctaaaaatcaggacgatttgactcacaagttagccgatattattaaatcaaacaat
gaattgcagcgtaacgagcaagccggggctgcaactcacattgttgctgtgaacattaaa
atgctgcaatttcacgtggcgacacttgttgacaacgacatgccgggaatgcccaaagcc
atgcagaaatccggtaagcctttaaaagccatcaaagcaagactgaaaggaaaggaaggt
cgtatacgtggtaaccttatgggtaagcgtgtcgacttttcagctcgtactgtcatcacg
ccagatccaaatctgcgtattgaccaagtcggtgtgcctcgtagtattgctcagaatttg
acattcccagaaatagttactccatttaatattgacaaaatgcaagagctggttcaacga
ggtaactcccagtatcctggagccaagtacatcgtacgagacaacggtgagcgtattgac
ttgaggtaccatcccaagccatcagacttgcatctgcagtgtggataccgtgttgaaaga
cacattcgcgacggcgacttagttatcttcaatcgacagcccacgttacacaaaatgagt
atgatgggtcatcgtgttaaagttttaccctggagtacattccgtatgaatttaagttgt
acctcaccttacaatgccgattttgacggtgatgaaatgaacttgcacgttccacagtct
atggaaacgcgagctgaggttgagaatattcacgttacaccacgtcagattattactcct
caagcaaacaaacctgtcatgggtattgtacaggacacgttgacggctgtaagaaaaatg
accaaacgtgatgttttcatcgagaaagaacagatgatgaatatcctcatgtttttaccg
agctgggatggtaaaatgccgcagccttgcattttaaaaccaaaacctctgtggactggt
aagcaaatattctcgctgattattcccggtaatgtcaacatgatccgtacacacagtact
cacccggatgaggaggacgacggtccttacaagtggatttctccgggagacaccaaagta
atggtagagcacggtgagctggtgatgggtatcctttgtaaaaagactctgggtacgtct
gcaggttctttgcttcatatttgtatgttggagctgggtcacgacgtttgcggtaaattt
tacggtaacattcagactgtaattaacacgtggttattgctagagggtcactcaatcggt
attggtgacactattgctgatccgcaaacttacatagatatccaaaaagctattaagaaa
gctaaagcggatgtaatagaaattatccagaaagcccacaacatggagttggagcctact
cctggtaatacactgcgacagacttttgaaaatcaggtaaacagaattcttaacgacgct
cgtgacaaaactggaagttctgccaagacatctttgactgagtacaacaacttgaaggct
atggtggtatcaggatccaaggggtctaacattaatatttctcaggttattgcttgtgta
ggtcaacaaaacgttgaaggtaaacgtattccatttggtttccgtaaacgtactttacca
cattttataaaagatgattacggtcccgagtctaaagggttcgtcgagaattcatatctt
gctggtcttactccgtccgaattttacttccacgccatgggaggtcgtgagggtcttatt
gatactgctgtaaaaactgctgagactggatatattcaacgtcgtttgataaaggctatg
gagtctgtaatggtacattacgacggtactgttagaaattctgttggtcagttgatccag
ttgcgttacggtgaagacggtttgtgcggagagactgtagagttccagaacttgccgaca
atcaagctgagccacaaagcatttgagaagaagttcaagtttgatcctagcaatgaaaga
tatctcaggagaattttcaccgaggacattgtcagagaaatgatgggatctggagaagtt
atctcagagcttgagcgtgagtgggaacaactgtccagagaccgggctattttgcgtgaa
attttccccagcggtgagtccaaagtggtattgccttgtaatttacaaagaatgatttgg
aatgtacaaaaaattttccacatcaacaaacgagctcccactgatctcagcccaatgaaa
gttatccaaggtgttaagcacttgctggagagatgtatcattgtagccggtgacgaccgt
ttgagtaaacaagccaatgaaaacgctacgctgcttttccgctgtctcgtacggtcaact
ttatgcacaaagtgtgtgtccgaagaattccgactctcgagcgaagcctttgagtggttg
attggagaaatagaaacccgattccagcaggctcaagtttgtcctggtgaaatggttggt
gcgttggctgcccagtcacttggtgaacctgctactcagatgacactcaacactttccat
tttgccggagtatcgtccaagaacgtaactctcggagtaccacgtcttaaggaaattatt
aacatcagtaaaaagcccaaagctccttcgctaacagtatttttaactggtgttgctgcg
agagatgcagagaaagccaaaaatgtgctctgtcgtctcgagcacacaactttgagaaaa
gttacagccaacacagccatttattatgacccagatccacaaaatactgtcatcgcagag
gatcaggagtttgtaaatgtttactacgagatgcctgactttgatccgactaaaatatca
ccatggctgttgcgtattgaattggaccgcaagaggatgactgacaaaaaattgactatg
gaacaaatcgctgaaaaaatcaacgctggttttggtgacgatctcaattgtatattcaat
gacgacaatgctgagaaattagttttacgaataagaataatgaacagcgaggacaataaa
ttccatgaatgtgacgaagagatcgctgataaaatggaagatgatatgttcctacgttgt
attgaagccaatatgctcagtgacatgacactccagggtattgagactattggcaaagtg
tacatgcatttacctcaaacggatgccaagaaacgtattataataacagacacaggtgaa
ttcaaagccattgccgaatggctgctggaaactgacggtaccagtttgatgaaagtactc
agtgaacgtgacgtcgatccagtgaggaccttctcgaacgatatttgtgagatattccaa
gtgctgggtatcgaagctgtccgtaagtctgtcgagaaagaaatgaacgctgtattgcaa
ttctacggtctgtatgtaaactaccgtcacttggcgttgctttgtgatgtgatgactgcc
aagggacacttgatggctatcacgcgtcacggtatcaacagacaggacactggtgctctc
atgagatgttcattcgaggaaacagttgatgtgctgctcgacgctgcttctcacgctgag
gttgatcctatgagaggagtgtcggagaatattatcatgggacaattgccaaggattggt
actggatgcttcgacttactgctggacgctgaaaaatgtaagcaaggtatcgagattcct
tcagttatcggtgcgagtatcatgagtggagctggtatgttctttggaagcgctgctaca
ccgagtatgagtcctcagatgactccttggaaccaaatgggagctactcctggctacggt
gcatctgctatgtctcctgctctaggaagtggtatgactccaggaggagcttgcttctca
ccatctggtgcctcagacgcgtcaggactgtcaccagcgtactcagcgtactcaccacaa
cctggcagtcctggaagtccaggcccaagtatgagtccttacccaatgtcaccagcaggt
ggtgcctcaccaagttactcaccgacttctccggcatacttaccaacgtcgccgagcatg
actccgtcgagtcctaattattctccaacaagcccgacatactcaccaaccagtcctaat
tactcaccaacatctccgagttattctccaacaagtcccggttactctccggcgagcccg
agctactctccaactagccccagttactcgccaacatctccaagctattcacccaccagt
ccgagttattctccgacgagtcctagctactcaccaacatctcccagctactctcctacc
tcaccaagctattcacctacaagccatagttattctccaaccagccccagctattcacca
accagtcctgggtattctcccacgagtccgagttactcaccaaccagcccaggctactct
ccagctggaccgagttactctccaacaagtccatcatattcaccaagctcgcccaattac
actcctcaatctcggtcttattcaccaacaagtcccagctactctccaagctcgcctcaa
tattctccagcgagtccaagctactcaccgagcagtccaaagtattctccaacaagtcct
agctactctccaacttcgccatcattcgctggcacctcacctcagtacacaccaacaagt
ccaacttactcgcctaccagtccaacttactcaccaaccagtccttcctactctcccagc
tcacctcaacacaccactggcggcagcagcacgagatactcccccagcagtcctaattat
tcgcccaccagtccaacttactcgccttcaagtccacaatattctccgtcgagtacaaaa
tattcacctacgagtcctacttacacaccaacttctccaagctactcaccaactagccca
acttattctcctcctgtgcctggctattcgccgacaagcccaacctattcaccagcttcg
ccgacctacgagagcgaggactaa
DBGET
integrated database retrieval system
