Cotesia typhae: 141531341
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Entry
141531341 CDS
T11099
Name
(RefSeq) putative DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
ctyp Cotesia typhae
Pathway
ctyp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ctyp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
141531341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctyp03400
]
141531341
DNA repair and recombination proteins [BR:
ctyp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
141531341
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Adenylsucc_synt
Motif
Other DBs
NCBI-GeneID:
141531341
NCBI-ProteinID:
XP_074105189
LinkDB
All DBs
Position
Unknown
AA seq
1167 aa
AA seq
DB search
MSKRTLRSRTRTEDLESPKKVPKKDEKKATKTTTRPKSQQPSKPATPKRQPAKSKAEPQT
QPKKAIINGKENKETTATPKRKREVKKPKIEELYSDDDEEEEEKTPVKRKRRKIVVPSDE
SGDDSDEYKPSDDDASDSDASISSAAASSEVDTSLNNTADTVSDDEPPPKREQKPRNPDR
GKKWYPNKKKKVEDDDESGKSFQLAKAKLQSGSVSGAESWPHLKYPFLQPENILDAEKRR
PDHPEYNPKTLYVPQEFLDKQTPSMRQWWTLKSQHFDCVLFHKIGKFYGLYHMDAVSGVN
ALGLNFIQRDFAYTGCFEVNYSRLFKTFVEKGYKVARVEQTETPEMMAKRCEKSKSKTSK
FDKLVRREVCQISTRGTRISTVLDIENFSSHSNYLLSLVEDHSNKLPTYGICFIDTSIGI
FHLGQFKDDCHNSRLLTLLSHYTPAHVVYGKGNLSPVTMKILNTHLPVTTLKEALLKDQF
WSVKVILNRLKDGHYFKYESDEFSWPEGLKPFINYHDNNKTVNPVDDKKLAINALGGCVS
VLTECVLDEQLLALKNFQTYIPPDMNVVYEKRVGPLVNMVIDAATIENLNILGKSPSLLT
TLDYCCTDFGKRLLKEWVCRPACNRDIITARIDAVSELRDLKRICHDAKKQLSSLPDLER
LLITIHGHGNASKVKNHPDSRAIMCEWMTYNKRKITDLVTCLNGFKQVVEIMKLFDSLVS
DLIVQTTQVEPKGEFPDMTEALNHFDARFDSALALKQGCIIPKKGMDLEYDQVIVELEQI
KKDANEYLKSQSEFFETEIKYIGGGDDPYQLEVPESCASKVTPDYELENKRNGFKRYSTE
QTIKLQERQTAAEEHHDKVRKDSDRRTFAKFSEDYDMWATAVYKVAVLDVLISLAEYSRI
GDKCAPEINDTDEIMLDIQEGIHPFITSENFVPNNTSLAINGYGPLVILTGPNMGGKSTI
MRQVGLLSIMAHIGCHIPAQSCKLSLIDRVFTRLGANDDMRTGRSTFLVELSEAATFVLH
ATKNSLVLVDELGRGTSTHDGTTIAAAILKALSKLECRTLFSTHYHMLVHEFKDNPAVSP
AHMACQVESEETDATQETVTFLYKLAKGPCPKSYGFNAARIAGIKSHITKRANELAKKLE
DAGNRRNLFISLCSVNRNDVKNLIGQL
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaacgaactttacgttcaagaacccgtactgaagatctagaatcacctaaaaaa
gtaccgaaaaaagatgaaaaaaaggctactaaaaccacaacgcgtccaaagtcacaacaa
ccatctaaaccagcaacacctaaacgacaaccagctaaatctaaagctgaacctcaaact
cagcctaaaaaagcaattatcaatggaaaagaaaataaagaaaccactgctactcctaaa
aggaagcgagaagttaaaaaacccaagatagaagaactgtactcagatgatgatgaggaa
gaagaggaaaaaactccagtaaaaaggaagaggaggaagattgttgttccttctgatgaa
agtggagatgattcggatgaatacaagccaagtgacgatgatgcttcagactcagacgct
tcaatatcatcagctgctgctagctctgaagtggatacatcgttgaataatacggcagat
actgtttctgacgatgagccaccacctaaaagagaacagaaaccgaggaatcctgataga
ggtaaaaagtggtatccaaataaaaaaaagaaagtcgaggatgatgatgagtctggcaag
tcattccaattggcaaaggctaaactacagtcaggatcagtgtcgggtgctgaaagttgg
cctcatttaaagtatccatttcttcagccggaaaatattctagatgcggaaaaaagacga
cctgatcatccagaatataatccaaaaacactctatgtgcctcaagaatttcttgataag
caaaccccatcgatgcgtcagtggtggacactcaaaagtcaacactttgactgcgtgttg
ttccataaaattggtaaattttatgggctgtatcatatggatgcagtctctggagtaaat
gctcttggcttaaattttatacagcgcgactttgcttatacaggatgttttgaagtgaac
tacagtcggctttttaaaacttttgttgaaaaaggctacaaagtagctcgtgttgaacaa
actgaaactccagaaatgatggcaaagcgttgtgaaaaatcaaaatcaaaaacatctaaa
tttgataaacttgttagacgtgaagtctgccaaattagtactcgaggtacacgaatctct
acggtcctagatatagaaaatttttcatcgcattctaattatttgttgtcattggtcgaa
gatcattccaataaattacctacttatggtatttgttttattgacacaagtatcggtatt
tttcatttaggtcaattcaaagatgattgtcacaattcacgtctccttacgttattgtct
cattatacacctgcccacgttgtctatggaaaaggaaatctttctccagtaacgatgaaa
attctcaatacgcatttgcctgtgacaacattaaaagaggctttgttaaaagatcaattt
tggtctgtcaaggtgattcttaataggcttaaggacggccactactttaaatacgagtca
gatgaattttcttggccagaaggattgaaaccttttataaattatcatgataataataaa
actgttaacccagttgatgacaaaaaactggctattaatgctcttggaggatgtgtttct
gtactaactgaatgtgtgttagatgaacaactactcgcgcttaaaaactttcaaacatat
attccacctgatatgaatgttgtttatgagaagcgtgttggtccactcgttaatatggtt
atcgatgctgcgactattgaaaatttaaatattcttggtaagagtccttcactcttaacg
actttagattattgctgtactgattttggtaagcgattattaaaagaatgggtttgtagg
ccagcttgtaatagagatattattacagctcgtatagatgctgtctccgagttgcgtgat
ctaaaacgcatatgtcatgatgctaaaaagcagttgagtagccttccagatctcgagaga
ttactaattacaattcacggtcatggtaatgcttccaaagtcaaaaatcatcccgattct
cgtgccatcatgtgtgaatggatgacatataataaaagaaaaattaccgacttggtgact
tgtttaaacggtttcaaacaagtagttgaaattatgaaactttttgactccttggtgagc
gatttaatagtacaaacaacacaagttgaaccgaaaggagaatttcctgacatgactgaa
gccctaaaccattttgatgcgagattcgattcagcattagcattaaaacaaggatgtata
attcctaaaaaaggaatggacttggaatatgatcaagtgattgtcgagttagagcaaata
aaaaaggatgcaaatgaatatttaaaatcccaaagcgaattttttgaaactgaaattaaa
tacataggcgggggtgatgatccttatcaacttgaagttccagaaagttgcgcgagtaaa
gttactcctgattacgaactggaaaataaacgtaacggatttaaacgctactcgactgaa
caaactataaaacttcaagaacgacaaacagctgctgaagaacatcatgataaagtacga
aaagattctgatagacgaacttttgcaaagttcagcgaggattacgatatgtgggctaca
gctgtctataaagttgctgttcttgacgttcttatttctcttgctgaatattccaggatc
ggtgataagtgtgctccagaaatcaacgatacggatgaaattatgttagatattcaagaa
ggaattcatcctttcatcacatctgaaaattttgtacccaacaatacatcacttgcgata
aatggctacggacctctggtgattttaactggaccaaatatgggtggaaagtcaacaata
atgcgtcaagtcggtttactgagcattatggcacatataggctgccatataccagcacaa
agttgtaaactttcgttgatagatcgtgttttcactcgactcggtgccaatgatgacatg
agaactggcaggagcacatttttagtcgaattgagcgaagctgctacatttgtactacat
gctacgaaaaattctctagttctcgttgacgagctcggacgaggtacatcaacacacgat
ggtacaacaatagctgcggctatcctcaaagccctctcaaaacttgaatgtcgaacttta
ttctctacccactatcatatgctggtacacgaatttaaagataatcccgctgtctcacca
gctcacatggcatgtcaagttgagagtgaagagactgacgctactcaagaaaccgtaact
tttttatacaagcttgctaaaggcccatgcccaaaatcgtatggatttaatgcagccaga
atcgctggaatcaaatctcatattacaaaacgagctaatgagcttgctaaaaaattagaa
gatgctggaaatcgaagaaatttatttatatcattatgtagcgttaaccgaaatgatgta
aaaaaccttattgggcagttataa
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