Cotesia typhae: 141531884
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Entry
141531884 CDS
T11099
Symbol
Sf3b1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
ctyp Cotesia typhae
Pathway
ctyp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ctyp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141531884 (Sf3b1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ctyp03041
]
141531884 (Sf3b1)
03036 Chromosome and associated proteins [BR:
ctyp03036
]
141531884 (Sf3b1)
Spliceosome [BR:
ctyp03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
141531884 (Sf3b1)
Complex B
141531884 (Sf3b1)
Complex C
U2 SnRNP specific factors
141531884 (Sf3b1)
Chromosome and associated proteins [BR:
ctyp03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
141531884 (Sf3b1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
HEAT_2
Htt_N-HEAT_1
XMAP215_CLASP_TOG
UME
DUF2298
Motif
Other DBs
NCBI-GeneID:
141531884
NCBI-ProteinID:
XP_074106061
LinkDB
All DBs
Position
Unknown
AA seq
1317 aa
AA seq
DB search
MDSIPRTHEDIEAQIREIQSKKKEIQTAVTEKEQVGLGKTGFYDQDIYDGTNNKFEGYVT
SIATNDEADDDDYEPSTFSSNKRAGYNPPAALLNDIAQSDRDYDPFADRKVPKIADREDE
YRQKRRHMIISPDRVDPFADGGKTPDAGSRTYTEIMKEQMVRGEESEIRKKIIEKAKDGT
LKATNGEPKPAPKKRGRWDQTDDMPAAKKAAGTAATPNSWDNTDVTPAAIRWDETPGHGK
GGETPGATPGVSTRMWDSTPSHATPGAVTPGRETPSHDKVISSRRNRWDETPKTERETPG
HNSGWAETPRTDQVAGDLIQETPTPSASKRRSRWDETPSNQTPGSMTPQTPATPLTTPHQ
TSIMTPSAVTPTGPKAMGLATPTPGHLMSLTPEQLQAYRWEREIDERNRPLSDDELDSLF
PPGYKILQPPAGYVPIRTPARKLTATPTPMAGTPQGFFIQTEDKSAKYVDNQPKGNLPFM
KPEDAQYFDKLLVDVDEESLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFG
AGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDY
YARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPF
LKAVCRSKKSWQARHTGIKIVQQIAILMGCAILPHLKSLVEIIEHGLVDEQQKVRTITAL
AIAALAEAATPYGIESFDSVLKPLWKGIRTHRGKGLAAFLKAIGYLIPLMDAEYANYYTR
EVMLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEAQYIKDEILPHFFKHFWNHRMALDR
RNYRQLVDTTVEIANKVGASEIINRVVDDLKDENEQYRKMVMETIEKIMGNLGAADVDSR
LEEQLIDGILYAFQEQTTEDVVMLNGFGTIVNTLGKRVKPYLPQICGTILWRLNNKSAKV
RQQAADLISRIAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMT
KMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFELLELLK
AHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFT
VLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVSPLLEDALMDRDLVHRQT
ACAAIKHMALGVYGFGCEDALIHLLNHVWPNVFETSPHLVQAFMDAVDGLRVALGPIKIL
QYTLQGLFHPARKVRDVYWKIYNSLYIGGQDALVAGYPRIMNDPKNQYIRYELDYVL
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atggactccattccacgtactcacgaagacatcgaggctcagatccgggagattcagtcc
aagaaaaaagaaatccagactgcggtgactgaaaaagaacaggtcggattgggaaaaacg
ggattttatgaccaagatatctacgatggaaccaacaacaaatttgaaggctacgttaca
tctattgcgactaacgatgaagccgacgatgatgattatgagcccagcacattcagctct
aacaaaagggctggatacaatccaccagctgctttgcttaatgatattgctcagagtgac
agagattatgatccattcgccgatcgcaaagtaccaaaaatagcggatcgtgaagatgaa
tatcgccagaaacgtcgccacatgatcatttcgccagatcgagttgatccttttgctgat
ggtggtaaaactccagatgctggttcacgtacttacaccgagattatgaaagagcagatg
gtcagaggtgaagaatcagagatacgtaaaaaaataatagaaaaagctaaagatggaaca
ctcaaagctactaatggtgaacccaaaccagctcctaagaaacgtggccgttgggatcaa
actgatgacatgccggcggccaaaaaagctgctggtactgcagcaacacctaattcctgg
gataacactgacgtaacaccagcagcaataagatgggacgaaaccccaggccacggaaaa
ggcggtgaaacccccggcgcaaccccaggagtcagtaccagaatgtgggactcaactccg
agccacgcaactcccggagcagtaactcccggccgtgagactccctcccacgacaaagtg
atctccagccgccgaaaccgttgggacgagaccccaaaaacagagcgcgagacccccggc
cacaacagcggctgggccgagactccgcgaacagaccaagtagccggcgatctaatccaa
gaaaccccaacaccttcagcctccaagcgccgcagccgttgggacgagacgccctccaac
caaactccgggctcaatgacaccccagaccccagcgacgcctctaacaactccgcaccaa
acctcaataatgaccccaagcgcggtcacccccaccgggcccaaagcaatgggcctcgcc
acccccacacccggtcacctaatgtctctgacccccgagcagcttcaagcttaccgctgg
gagcgtgaaatcgacgaaagaaaccgtccgctctccgacgacgagctggactcactcttt
cctccaggttacaagattctccagcctccagctgggtatgttcccatcagaactcccgcg
aggaagcttaccgcgactcccacgcccatggctggaactcctcaaggcttcttcatccaa
acagaagacaagagcgctaagtacgtcgacaaccagcctaaaggcaatcttcctttcatg
aagcccgaggacgctcagtacttcgacaagctcctggttgacgtcgacgaggagtctctg
agccccgaggaacagaaagagcgtaaaataatgaagcttttattgaaaattaaaaatgga
actcctccgatgaggaaagctgcgttgagacaaatcaccgacaaagcccgagagttcgga
gcaggtcctttattcaaccagatcctgccgctcttgatgtctccaaccctagaagaccag
gagcgccatctcctagtaaaagtcatcgaccgcattctctacaaactagacgacctggtg
cgtccttacgtccacaaaattctagtagtgatagagcctctgctaattgacgaggactac
tatgccagagttgaaggccgagagataatctccaacctcgctaaagccgcaggattggcc
acgatgatctcgaccatgcggcctgacattgacaacatagatgagtacgtaagaaacaca
acagccagagccttcgcggtggtagcttcagccctgggaatcccttcactgctcccgttc
ttaaaagccgtctgcaggagcaagaaatcctggcaagccagacacactggtattaaaatc
gtccagcagatcgctatcttaatggggtgtgcaattcttcctcacttgaagagcttggtg
gagatcatagagcacggcttggtcgacgagcagcagaaggtgaggacgattactgcttta
gcgatcgctgcgctggccgaagctgctacgccgtacggtatcgagagctttgactcggtg
ctgaagcccttgtggaagggtattaggacccacagaggaaaagggttggctgcttttttg
aaggctattgggtacttgatccctctgatggacgccgagtacgctaattactataccagg
gaagtaatgttgattttaatcagagagttccagtccccggatgaagaaatgaagaagatt
gttctgaaagtagtcaagcagtgctgcggaacggacggagttgaagctcaatatataaaa
gacgaaattctcccgcactttttcaagcacttctggaaccaccgcatggcgctggacaga
cggaattaccgacagttggtagacaccactgtggagatagcaaacaaagtcggggcttct
gagataataaatagagtcgttgacgatcttaaagacgagaatgaacagtatcggaaaatg
gtgatggagaccatagagaagataatggggaacttgggcgctgctgatgtggactcgagg
ttagaggaacagctgatagatggcattctgtacgcgttccaggaacagactacagaggac
gtggtgatgctcaacggctttggaaccattgttaacaccctgggtaagcgggtcaagcct
tacctgccgcagatctgtggaacgattttgtggaggttgaataataaatcagcaaaggtg
agacagcaagccgcggatttgatctcgaggatcgcggtggtgatgaagacttgtcaggag
gagaagctgatgggtcacttgggggtcgtgctgtacgagtacctcggtgaggagtacccg
gaggttctgggtagcattttaggcgcgcttaaggctattgtcaatgtcattggaatgacg
aagatgacgccgccgattaaggacttgttgccgaggctgacgcctattttgaagaaccgg
cacgagaaggttcaggagaattgcattgacttggtgggaaggatagctgaccgcgggccg
gagtatgtgtctgctagggagtggatgcgcatttgcttcgagcttctggagctgctgaag
gctcacaaaaaagcaatccgccgggcgactgtcaatacttttgggtacattgctaaagca
attggtccgcacgatgttctcgcgactctgcttaataatttaaaggtccaggagcgccag
aacagagtttgcaccacggttgccattgctattgtcgcagaaacttgcagcccgttcacg
gttcttccagcgctgatgaacgagtaccgggttccggaactaaacgtccagaacggagtg
ctcaagtcgctctcgttcttgttcgagtacattggggagatgggcaaggattacatctac
gcggtgagtccgcttttggaggacgcgctgatggaccgcgatctggtgcatcgacagact
gcttgcgctgctatcaagcacatggcgcttggagtttatggctttggctgcgaagatgct
ttgattcacttgttgaaccacgtttggccgaatgtctttgaaacttcgccgcacttggtg
caagctttcatggatgctgttgatggactcagggtcgctttggggcctatcaagattctc
cagtacactcttcaggggctctttcatccagctagaaaggtcagggatgtttattggaag
atttataactcgctttacattggcggacaagacgcactcgttgccggctatccaaggatt
atgaacgatcctaaaaatcaatatattcgatatgagcttgattatgtcttgtaa
DBGET
integrated database retrieval system
