Cotesia typhae: 141532233
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Entry
141532233 CDS
T11099
Symbol
Caf1-55
Name
(RefSeq) chromatin assembly factor 1 p55 subunit
KO
K10752
histone-binding protein RBBP4
Organism
ctyp Cotesia typhae
Pathway
ctyp03082
ATP-dependent chromatin remodeling
ctyp03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ctyp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
141532233 (Caf1-55)
03083 Polycomb repressive complex
141532233 (Caf1-55)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ctyp03036
]
141532233 (Caf1-55)
Chromosome and associated proteins [BR:
ctyp03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
141532233 (Caf1-55)
Histone modification proteins
HAT complexes
HATB complex
141532233 (Caf1-55)
HDAC complexes
Sin3A-HDAC complex
141532233 (Caf1-55)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
141532233 (Caf1-55)
PRC2.2
141532233 (Caf1-55)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
141532233 (Caf1-55)
Heterochromatin formation proteins
Other heterochromatin formation proteins
141532233 (Caf1-55)
Chromatin remodeling factors
NuRD complex
141532233 (Caf1-55)
NuRF complex
141532233 (Caf1-55)
NuRF complex (fruit fly)
141532233 (Caf1-55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
EIF3I
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
Beta-prop_WDR19_1st
WD40_RFWD3
ANAPC4_WD40
eIF2A
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IFT140_1st
NBCH_WD40
MIOS_WD40
Beta-prop_IFT122_1st
PEP5_VPS11_N
Beta-prop_DCAF4
YqbF
Motif
Other DBs
NCBI-GeneID:
141532233
NCBI-ProteinID:
XP_074106578
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MGDKDGETFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPDSK
DYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASHYDNEKGEFGGFGSVSGKIEIEI
KINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKE
GYGLSWNPNLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDVAWHLLH
ESLFGSVADDQKLMIWDTRCNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVA
LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSSEDA
EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDTPAS
ELETGAS
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacaaggacggcgaaacttttgatgacgcggtagaagagcgcgtaataaatgaa
gagtacaagatctggaaaaagaacactccatttttgtatgaccttgtgatgacccacgct
ctagaatggccatcgctgacagcacagtggctaccagacgtaacccgtccagacagtaaa
gactactcgatccaccgactgatcctggggacccacacctccgatgagcaaaatcacctg
ctgatagccagcgtccaactcccgaacgaagacgcccaatttgacgcctcccactatgac
aatgaaaaaggagagttcggtggattcggctccgtcagcggcaagatcgagatcgagatt
aagatcaaccacgagggcgaggtcaaccgagctcggtacatgccccagaacccctgcgtc
atcgctaccaagacgccgtccagcgatgtcctcgtttttgactacaccaaacatcccagc
aagcctgatcccaatggcgagtgccatcctgatttgagactccgcgggcaccaaaaagaa
ggctacgggttatcctggaacccgaacttgaacgggtatctgctgagcgcgtccgacgac
cacacgatctgcttatgggacataaacgcgaccccgaaagagaaccgagtgatcgacgca
aagacaattttcacggggcacaccgcggttgtggaagacgtcgcctggcaccttttgcac
gagtctttgttcgggtccgtcgcggacgaccagaagttgatgatctgggacaccagatgc
aacaacaccagcaagcccagccacactgtagacgctcacaccgcggaggtcaactgtctc
agcttcaatccctactccgagttcattctagctacaggaagcgctgacaaaactgtcgcc
ctctgggatcttaggaacttgaaactcaagcttcactccttcgagtctcacaaggacgag
atcttccaggttcaatggtccccgcacaatgagactattcttgctagcagtggcaccgac
aggcgtctgcatgtttgggatctcagtaaaattggcgaggaacagtccagtgaagatgct
gaggacggtcctccggagctattgttcattcacggtggacacactgctaaaataagcgat
ttctcatggaaccccaacgaaccttgggtaatctgttcagtgtccgaggataatatcatg
caggtctggcaaatggccgaaaacatttacaacgacgaggaaccggacactccagccagt
gagctagaaaccggcgcatcttaa
DBGET
integrated database retrieval system
