Chlamydia trachomatis B/TZ1A828/OT: CTB_4121
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Entry
CTB_4121 CDS
T01327
Symbol
pmpB
Name
(GenBank) polymorphic outer membrane protein
Organism
ctz
Chlamydia trachomatis B/TZ1A828/OT
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ChlamPMP_M
Chlam_PMP
Autotransporter
Motif
Other DBs
NCBI-ProteinID:
CAX09973
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All DBs
Position
476538..481793
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AA seq
1751 aa
AA seq
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MKWLSATAVFAAVLPSVSGFCFPEPKELNFSRVGTSSSTTFTETVGEAGAEYIVSGNASF
TKFTNIPTTDTTTPMNSNSSSSNGETASVSEDSDSTTTTPDPKGGGAFYNAHSGVLSFMT
RSGTEGSLTLSEIKTTGEGGAIFSQGELLFTDLTGLTIQNNLSQLSGGAIFGGSTISLSG
ITKATFSSNSAEVPAPVKKPTEPKAQTASETSGSSSSSGNDSVSSPSSSRAEPAAANLQS
HFICATATPAAQTDTETSTPSHKPGSGGAIYAKGDLTIADSQEVLFSINKATKDGGAIFA
EKDVSFENITSLKVQTNGAEEKGGAIYAKGDLSIQSSKQSLFNSNYSKQGGGALYVEGDI
NFQDLEEIRIKYNKAGTFETKKITLPKAQASAGNADAWASSSPQSGSGATTVSNSGDSSS
GSDSDTSETVPATAKGGGLYTDKNLSITNITGIIEIANNKATDVGGGAYVKGTLTCENSH
RLQFLKNSSDKQGGGIYGEDNITLSNLTGKTLFQENTAKEEGGGLFIKGTDKALTMTGLD
SFCLINNTSEKHGGGAFVTKEISQTYTSDVETIPGITPVHGETVITGNKSTGGNGGGVCT
KRLALSNLQSISISGNSAAENGGGAHTCPDSFPTADTAEQPAAASAATSTPKSAPVVSTA
LSTPSSSTVSSLTLLAASSQASPATSNKETQDPNADTDLLIDYVVDTTISKNTAKKGGGI
YAKKAKMSRIDQLNISENSATEIGGGICCKESLELDTLVSLSVTENLVGKEGGGLHAKTV
NISNLKSGFSFSNNKANSSSTGVATTASAPAAAAASLQAAAAAAPSSPATPTYSGVVGGA
IYGEKVTFSQCSGTCQFSGNQAIDNNPSQSSLNVQGGAIYAKTSLSIGSSDAGTSYIFSG
NSVSTGKSQTTGQIAGGAIYSPTVTLNCPATFSNNTASMATPKTSSEDGSSGNSIKDTIG
GAIAGTAITLSGVSRFSGNTADLGAAIGTLANANTPSTTSGSQNSITEKITLENGSFIFE
RNQANKRGAIYSPSVSIKGNNITFNQNTSTHDGSAIYFTKDATIESLGSVLFTGNNVTAT
QASSATSGQNTNTANYGAAIFGDPGTTQSSQTDAILTLLASSGNITFSNNSLQNNQGDTP
ASKFCSIAGYVKLSLQAAKGKTISFFDCVHISTKKTGSTQKVYETLDINKEEKSNPYTGT
IVFSSELHENKSYIPQNAILHNGTLVLKEKTELHVVSFEQKEGSKLIMEPGAVLSNQNIA
NGALAINGLTIDLSSMGTPQAGEIFSPPELRIVATTSSASGGSGVSSSIPTNPKRISAAA
PSGSAATTPTMSENKVFLTGDLTLIDPNRNFYQNPILGSDLDVPLIKLPTDTSDVQVYDL
TLSGDLFPQKGYMGTWTLDSNPQTGKLQARWTFDTYRRWVYIPRDNHFYANSILGSQNSM
IVVKQGLINNMLNNARFDDIAYNNFWVSGVGTFLAQQGTPLSEEFSYYSRGTSVAIDAKP
RQDFILGAAFSKMVGKTKAIKKMHNYFHKGSEYSYQASVYGGKFLYFLLNKQHGWALPFL
IQGVVSYGHIKHDTTTLYPSIHERNKGDWEDLGWLADLRISMDLKEPSKDSSKRITVYGE
LEYSSIRQKQFTEIDYDPRHFDDCAYRNLSLPVGCAVEGAIMNCNILMYNKLALAYMPSI
YRNNPVCKYRVLSSNEAGQVICGVPTRTSARAEYSTQLYLGPFWTLYGNYTIDVGMYTLS
QMTSCGARMIF
NT seq
5256 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggctgtcagctactgcggtgtttgctgctgttctcccctcagtttcagggttt
tgcttcccagaacctaaagaattaaatttctctcgcgtaggaacttcttcctctaccact
tttactgaaacagttggagaagctggggcagaatatatcgtctctggtaacgcatctttc
acaaaatttaccaacattcctactaccgatacaacaactcccatgaactcaaactcctct
agctctaacggagagactgcttccgtttctgaggatagtgactctacaacaacgactcct
gatcctaaaggtggcggcgccttttataacgcgcactccggagttttgtcctttatgaca
cgatcaggaacagaaggttccttaactctgtctgagataaaaacgactggtgaaggcggt
gctatcttctctcaaggagagctgctatttacagatctgacaggtctaaccatccaaaat
aacttatcccagctatccggaggagcgatttttggaggatctacaatctccctatcaggg
attactaaagcgactttctcctccaactctgcagaagttcctgctcctgttaagaaacct
acagaacctaaagctcaaacagcaagcgaaacgtcgggttctagtagttctagcggaaat
gattcggtgtcttcccccagttccagtagagctgaacccgcagcagctaatcttcaaagt
cactttatttgtgctacagctactcctgctgctcaaaccgatacagaaacatcaactccc
tctcataagccaggatctgggggagctatctatgctaaaggcgaccttactatcgcagac
tctcaagaggtactattctcaataaataaagctactaaagatggaggagcgatctttgct
gagaaagatgtttctttcgagaatattacatcattaaaagtacaaactaacggtgctgaa
gaaaagggaggagctatctatgctaaaggtgacctctcaattcaatcttctaaacagagt
ctttttaattctaactacagtaaacaaggtggtggggctctatatgttgaaggagatata
aacttccaagatcttgaagaaattcgcattaagtacaataaagctggaacgttcgaaaca
aaaaaaatcactttaccaaaagctcaagcatctgcaggaaatgcagatgcttgggcctct
tcctctcctcaatctggttctggagcaactacagtctccaactcaggagactctagctct
ggctcagactcggatacctcagaaacagttccagccacagctaaaggcggtgggctttat
actgataagaatctttcgattactaacatcacaggaattatcgaaattgcaaataacaaa
gcgacagatgttggaggtggtgcttacgtaaaaggaacccttacttgtgaaaactctcac
cgtctacaatttttgaaaaactcttccgataaacaaggtggaggaatctacggagaagac
aacatcaccctttctaatttgacagggaagactctattccaagagaatactgccaaagaa
gagggcggtggactcttcataaaaggtacagataaagctcttacaatgacaggactggat
agtttctgtttaattaataacacatcagaaaaacatggtggtggagcctttgttaccaaa
gaaatctctcagacttacacctctgatgtggaaacaattccaggaatcacgcctgtacat
ggtgaaacagtcattactggcaataaatctacaggaggtaatggtggaggcgtgtgtaca
aaacgtcttgccttatctaaccttcaaagcatttctatatccgggaattctgcagcagaa
aatggtggtggagcccacacatgcccagatagcttcccaacggcggatactgcagaacag
cccgcagcagcttctgccgcgacgtctactcccaagtctgccccagtggtctcaactgct
ctaagcacaccttcatcttctaccgtctcttcattaaccttactagcagcctcttcacaa
gcctctcctgcaacctctaataaggaaactcaagatcctaatgctgatacagacttattg
atcgattatgtagttgatacgactatcagcaaaaacactgctaagaaaggcggtggaatc
tatgctaaaaaagccaagatgtcccgcatagaccaactgaatatctctgagaactccgct
acagagataggtggaggtatctgctgtaaagaatctttagaactagataccctagtctcc
ttatctgtaacagagaaccttgttgggaaagaaggtggaggcttacatgctaaaactgta
aatatttctaatctgaaatcaggcttctctttctcgaacaacaaagcaaactcctcatcc
acaggagtcgcaacaacagcttcagcacctgctgcagctgctgcttccctacaagcagcc
gcagcagccgcaccatcatctccagcaacaccaacttattcaggtgtagtaggaggagct
atctatggagaaaaggttacattctctcaatgtagcgggacttgtcagttctctgggaac
caagctatcgataacaatccctcccaatcatcgttgaacgtacaaggaggagccatctat
gccaaaacctctttgtctattggatcttccgatgctggaacctcctatattttctcgggg
aacagtgtctccactgggaaatctcaaacaacagggcaaatagcgggaggagcgatctac
tcccctactgttacattgaattgtcctgcgacattctctaacaatacagcctctatggct
acaccaaagacttcttctgaagatggatcctcaggaaattctattaaagataccattgga
ggagccattgcagggacagccattaccctatctggagtctctcgattttcagggaatacg
gctgatttaggagctgcaataggaactctagctaatgcaaatacacccagtacaactagc
ggatctcaaaatagcattacagaaaaaattactttagaaaacggttcttttatttttgaa
agaaaccaagctaataaacgtggagcgatttactctcctagcgtttccattaaagggaat
aatattaccttcaatcaaaatacatccactcatgatggaagcgctatctactttacaaaa
gatgctacgattgagtctttaggatctgttctttttacaggaaataacgttacagctaca
caagctagttctgcaacatctggacaaaatacaaatactgccaactatggggcagccatc
tttggagatccaggaaccactcaatcgtctcaaacagatgccattttaacccttcttgct
tcttctggaaacattacttttagcaacaacagtttacagaataaccaaggtgatactccc
gctagcaagttttgtagtattgcaggatacgtcaaactctctctacaagccgctaaaggg
aagactattagctttttcgattgtgtgcacatctctaccaaaaaaacaggttcaacacaa
aaagtttatgaaactttagatattaataaagaagagaagagtaatccatatacaggaact
attgtgttctcttctgaattacatgaaaacaaatcttacatcccacagaatgcaatcctt
cacaacggaactttagttcttaaagagaaaacagaactccacgtagtctcttttgagcag
aaagaagggtctaaattaattatggaacccggagctgtgttatctaaccaaaacatagct
aacggagctctagctatcaatgggttaacgattgatctttccagtatggggactcctcaa
gcaggggaaatcttctctcctccagaattacgtatcgttgccacgacctctagtgcatcc
ggaggaagcggggtcagcagtagtataccaacaaatcctaaaaggatttctgcagcagcg
ccttcaggttctgccgcaactactccaactatgagcgagaacaaagttttcctaacagga
gaccttactttaatagatcctaatagaaacttttaccaaaaccctatattaggaagcgat
ctagatgtaccactaattaagcttccgactgacacaagtgacgtccaagtctatgattta
actttatctggggatcttttccctcagaaagggtacatgggaacctggacattagattct
aatccacaaacagggaaacttcaagccagatggacattcgatacctatcgtcgctgggta
tacatacctagggataatcatttttatgcgaactctatcttaggctcccaaaactcaatg
attgttgtgaagcaagggcttatcaacaacatgttgaataatgcccgcttcgatgatatc
gcttacaataacttctgggtttcaggagtaggaactttcttagctcaacaaggaactcct
ctttccgaagaattcagttactacagccgcggaacttcagttgccatcgatgccaaacct
agacaagattttatcctaggagctgcatttagtaagatggtggggaaaaccaaagccatc
aaaaaaatgcataattacttccataagggctctgagtactcttaccaagcttctgtctat
ggaggtaaattcctgtatttcttgctcaataagcaacatggttgggcacttcctttccta
atacaaggagtcgtgtcctatggacatattaaacatgatacaacaacactttacccttct
atccatgaaagaaataaaggagattgggaagatttaggatggttagcggatcttcgtatc
tctatggatcttaaagaaccttctaaagattcttctaaacggatcactgtctatggggaa
ctcgagtattccagcattcgccagaaacagttcacagaaatcgattacgatccaagacac
ttcgatgattgtgcttacagaaatctgtcgcttcctgtgggatgcgctgtcgaaggagct
atcatgaactgtaatattcttatgtataataagcttgcattagcctacatgccttctatc
tacagaaataatcctgtctgtaaatatcgggtattgtcttcgaatgaagctggtcaagtt
atctgcggagtgccaactagaacctctgctagagcagaatacagtactcaactatatctt
ggtcccttctggactctctacggaaactatactatcgatgtaggcatgtatacgctatcg
caaatgactagctgcggtgctcgcatgatcttctaa
DBGET
integrated database retrieval system
