Corynebacterium urealyticum DSM 7111: CU7111_0294
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Entry
CU7111_0294 CDS
T02457
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cua
Corynebacterium urealyticum DSM 7111
Pathway
cua03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cua00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CU7111_0294 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cua03021
]
CU7111_0294 (rpoC)
03400 DNA repair and recombination proteins [BR:
cua03400
]
CU7111_0294 (rpoC)
Enzymes [BR:
cua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CU7111_0294 (rpoC)
Transcription machinery [BR:
cua03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CU7111_0294 (rpoC)
DNA repair and recombination proteins [BR:
cua03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CU7111_0294 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AGE35890
LinkDB
All DBs
Position
364580..368551
Genome browser
AA seq
1323 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRRWSRGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
SCGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAANIITSVDEEARHSDQTTLEAEMLLEKKEVEQDRDAELADRAKTLEED
LAELEAAGAKADAKKKVQNAADREMRHIRERAEREVERLDEIWNTFVKLAPKQMIADETL
YEELLDRYEDYFTGGMGAEAIQTLIRNFDLEAEAESLREVIRDGKGQRKLRALKRLKVVA
AFLRSGNDPAGMVLDCIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMLDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHQCGLPKLMALELFKPFVMKRLVEKSYAQNIKSAKRMVERQR
PEVWDVLEEAIAEHPVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSDEAQAEARILMLASNNILSPASGKPLAMPRLDMVTGLYYLTLIKGKEEFGGQ
GAFTEATEQGPATGVYTSLAEAIMAYDRGVLGLQAPIHVRIDHLRPPAEVEAEQFPDGWQ
KGQTWTAETTLGRVQFNELLPWNYPYVEGVMDKKNQAVVINDLAAKYPMITVAQTVDKLK
DAGFYWATRSGVTITMHDVLVLPNKQEILDEYEAKAQRIEKKLARGKINESERYQSLVDL
WKEATDFVGESVEKLYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVTNSRGDYITRPVK
TSFREGLSVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVREDDCGTKQGV
VLDVCTPVLDANGEKTGEFARADFVETSVLGRFLAADAIGANGEVVCEAGTVIGELELAE
LVKAGVETIKARSVMTCGTATGVCSTCYGKSMATGKKVEIGEAVGIVAAQSIGEPGTQLT
MRTFHLGGVGGDITGGLPRVQELFEARVPKAKSPIASVDGKIKIEDDDAFFTLTIIPDDG
SEEVVYEKLSKRQGLATLGTGGVERPLRDGDHVKMGQQLLKGAADPHEVLRVMGRRGVQQ
HLINEVQKVYRDQGVAIHDKHIEIIVRQMLRRVTVIDSGSTEYLPGSLVDHSDAVAASKE
AVKTGGRPVEVRAEIMGITKASLATESWLSAASFQETTRVLTDAAINKRSDKLIGLKENV
IIGKLIPAGTGIARYRNIQVQPTEEARAAAFTLPSTFGDGFYGDEGYGEFTGASVPLDDL
GLH
NT seq
3972 nt
NT seq
+upstream
nt +downstream
nt
gtgctggacgtcaacttcttcgacgaactacgcattggcctggccacggccgatgacatc
cgtcgctggtcgcgcggcgaggtaaagaagcccgagacgatcaactaccgcaccctcaag
ccagagaaggacggtctgttctgcgagcgcattttcgggccgacccgcgactgggagtgc
tcctgcggtaagtacaagcgtgtccgctacaagggcatcatctgtgagcgctgtggcgtc
gaggtgaccaagtccaaggttcgccgtgagcgcatgggccacatcgagctggccgctccg
gtgacccacatttggtacttcaagggcgttccgtcccgcctcggctacctgctggatctg
gccccgaaggatctcgagaagatcatctacttcgcggccaacatcatcacctctgtcgat
gaggaggctcgtcacagcgaccagacgaccctcgaggcagagatgctgctcgagaagaag
gaggtcgagcaggaccgcgacgcggagctggccgaccgtgccaagactctcgaggaggac
ctcgcggagctcgaggctgccggcgcgaaggccgacgccaagaagaaggtgcagaacgcc
gctgaccgcgagatgcgccacatccgtgagcgcgctgagcgcgaggtggagcgcctcgac
gagatctggaacaccttcgtcaagctcgccccgaagcagatgatcgcggacgagaccctc
tacgaggagctgctcgaccgctacgaggattacttcaccggcggcatgggcgcggaggct
atccagaccctgatccgcaacttcgacctcgaggccgaggccgagtccctgcgtgaggtc
atccgcgatggcaagggccagcgcaagctgcgcgccctgaagcgcctgaaggttgtcgct
gcgttcctgcgctccggcaacgacccggccggcatggtcctggactgcatcccggtcatc
ccgccggagctgcgtccgatggttcagctggacggtggccgcttcgcgacctccgacctg
aacgacctgtaccgtcgcgtcatcaaccgcaacaaccgcctgaagcgcatgctggatctc
ggtgcccctgagatcatcgtgaacaacgagaagcgcatgctgcaggagtccgtggacgcg
ctgttcgacaacggccgtcgcggccgtccggtcaccggcccgggcaaccgtccgctgaag
tccctctccgacctgctgaagggtaagcagggccgcttccgccagaacctgctgggtaag
cgtgtggactactccggccgttcggtgattatcgttggtccgcagctgaagctgcaccag
tgtggtctgccgaagctgatggccctggaactgttcaagccattcgtgatgaagcgcctg
gtggagaagtcctacgcgcagaacatcaagtccgcgaagcgcatggttgagcgccagcgc
ccagaggtctgggacgttctggaagaggccatcgccgagcacccggtgatgctgaaccgt
gcaccaacgctgcaccgcctgggtatccaggccttcgagcccgtgctgattgagggtaag
gctattcagctgcacccgctggcttgtgaggccttcaacgcggacttcgatggtgaccag
atggcagtccacctgccgctgtccgacgaggcccaggctgaggcccgcatcctgatgctg
gcttccaacaacatcctgtccccggcctccggtaagccgctggctatgccgcgtctggac
atggtcaccggcctgtactacctgaccctgatcaagggcaaggaggagttcggcggccag
ggtgccttcaccgaggccaccgagcagggcccggcaactggcgtgtacacctccctggcg
gaggccatcatggcctacgaccgtggtgtgctcggcctacaggccccgatccacgtccgc
atcgaccacctccgcccgccggctgaggttgaggcggagcagttcccggatggttggcag
aagggccagacctggaccgccgagaccaccctgggccgcgtgcagttcaacgagctgctg
ccgtggaactacccgtacgtcgaaggcgtgatggacaagaagaaccaggccgtcgtcatt
aacgacctggcagcgaagtacccgatgatcaccgtcgcgcagacggtggacaagctgaag
gacgctggcttctactgggcaacccgctccggtgtgaccatcaccatgcacgacgtgctg
gtcctgccgaataagcaggagatcctcgacgagtacgaggccaaggcacagcgcatcgag
aagaagctggcccgaggcaagatcaacgagtccgagcgctaccagtccctggttgacctg
tggaaggaagcaacggacttcgtcggtgagtcggtggagaagctctacccggatgacaac
ccgatcccgatgatcgtgaagtccggtgctgccggtaacatgcgccagatctggaccctg
gccggcatgaagggcatggtcacgaactcccgcggtgattacatcacccgtccggtgaag
acctccttccgcgagggcctgtccgtgctcgagtacttcaacaactcccacggttcccgt
aagggcctggcggatacggcactgcgtaccgctgactccggttacctcacccgtcgtctg
gtggacgtcgcgcaggatgtcatcgtccgcgaggacgactgtggcaccaagcagggcgtt
gtcctggacgtctgcaccccggtgctggacgccaacggcgagaagaccggcgagttcgct
cgtgcggacttcgtcgagacctccgtgctgggccgcttcctggccgccgacgccatcggc
gcgaacggcgaggttgtctgcgaggccggtacggtcatcggcgagctggagctggcagag
ctggtcaaggctggcgtggagaccatcaaggctcgctccgtcatgacctgtggcaccgcc
accggcgtgtgctccacctgctacggcaagtccatggccacgggtaagaaggtcgagatc
ggcgaggccgtcggtatcgttgctgcccagtccattggtgagccgggtacccagctgacg
atgcgtaccttccacctcggtggtgttggtggcgatattacgggtggtctgccgcgtgtt
caggagctgttcgaggctcgtgttccgaaggcgaagtccccgatcgcttccgtggacggc
aagatcaagatcgaggacgacgacgcgttcttcaccctcacgatcatcccggacgatggt
tccgaggaggttgtgtacgagaagctgtcgaagcgtcagggcctggcaacgctgggcacc
ggtggcgtggagcgtccgctccgcgacggtgaccacgtgaagatgggccagcagctgctg
aagggcgctgcggatccgcacgaggtgctccgcgtgatgggtcgccgtggtgtgcagcag
cacctgatcaacgaggtgcagaaggtgtaccgcgatcagggtgtggctatccacgacaag
cacatcgagatcatcgtgcgccagatgctgcgccgcgtgacggtcatcgactccggctcc
acggagtacctgccgggctccctggtggatcactccgatgcggttgctgcgtcgaaggag
gccgtgaagactggtggccgcccggtcgaggttcgcgccgagatcatgggtatcaccaag
gcttccctggcaaccgagtcctggctatccgccgcctccttccaggagaccactcgcgtg
ctgacggacgctgcgatcaacaagcgttccgataagctcatcggtctcaaggagaacgtg
atcatcggtaagctgatcccggctggtacgggtatcgcccgctaccgcaacatccaggtc
cagccgaccgaggaggctcgtgctgcggcgttcacgttgccgtcgaccttcggtgacggt
ttctacggtgacgagggctacggtgagttcaccggcgcgtccgtcccgctggatgacctc
ggcctgcactaa
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integrated database retrieval system
