Curtobacterium sp. BH-2-1-1: BJK06_00670
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Entry
BJK06_00670 CDS
T04562
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cub
Curtobacterium sp. BH-2-1-1
Pathway
cub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BJK06_00670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cub03021
]
BJK06_00670
03019 Messenger RNA biogenesis [BR:
cub03019
]
BJK06_00670
Transcription machinery [BR:
cub03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BJK06_00670
Messenger RNA biogenesis [BR:
cub03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BJK06_00670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
Spore_III_AA
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AOX64522
LinkDB
All DBs
Position
complement(154390..156615)
Genome browser
AA seq
741 aa
AA seq
DB search
MTNVNDSTQVEIPSDLRALRLPELQRIASSLGITGLSKLRKGDLIASIEDKRPVTDDAPA
EPAAPAVEAPVAEQPTLPEPTEAPAAPAAEAVADAPAATEAPAEQPASSRARRSRRASSG
GTVSAAPTSAAEHTNHGQTGTEDLLAGLDQVRAEKDAQEAAQTGGQRRGRGQRDQQNGQQ
AERTERTEQTPDQAEQPTQPDAAGDQQEQSAHGTESGDQSDQQGEGGSRRGRRSRGRGRG
RGQNAENGEQGGDQNGRDNAPKTDAAQKNGQNGQNGQGQQGEQKNAQQDDKNEQKQNGQQ
QNGQQKQQGQQGQQKQQQAQQNADETEGGRSRRQRDRKRGRGGQNDEFEPEITEDDVLIP
IAGILDVLDNYAFVRTTGYLPGPNDVYVSLGQVKKYHLRKGDAVVGAIKQPRDNEQHSRQ
KYNALVKVDSVNGQTAEEAAARVDFQDLTPLYPNERLRLETEPSKLSTRIIDLVSPIGKG
QRGLIVSPPKAGKTVVLQAIANAIAKNNPEAHLMVVLVDERPEEVTDMQRTVKGEVIAST
FDRPAEDHTTVAELAIERAKRLVELGHDVVLLLDSITRLGRAYNLATPASGRVLSGGVDS
SALYPPKRFFGAARNIEDGGSLTILATALVETGSKMDEVIFEEFKGTGNMELRLNRHLAD
KRIFPAVDVNASGTRREEQLLSADEVKITWRLRRALAGLDPQQALEIVLRNLKETQSNVE
FLVQVQKSVPTTGGHHNGHQE
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
ttgacgaacgtcaacgactccacccaggtggagatccccagcgatctgcgcgccctccgg
ctcccggaactccagcgcatcgcctcctccctcggcatcacggggctctcgaagctccgc
aagggtgacctcatcgcctcgatcgaggacaagcgtcccgtgacggacgacgctcccgcc
gagccggccgcacccgcggtcgaggcccccgtggccgagcagccgacgctgccggagccg
accgaggcacccgctgcacccgccgctgaggccgtcgccgacgcaccggcagcgaccgag
gccccggccgagcagccggcgtcctcgcgggcccgccgttcgcgccgtgcctcctccggc
ggcaccgtgagcgccgcgccgacctcggccgccgagcacaccaaccacggtcagaccggc
accgaggacctcctcgccgggctcgaccaggtccgcgccgagaaggacgcccaggaagcc
gcgcagaccggcggccagcgtcgtggccgcgggcagcgcgaccagcagaacggccagcag
gcagagcgcaccgagcgcaccgagcagacgccggaccaggccgagcagccgacccagccg
gacgccgcgggcgaccagcaggagcagtccgcgcacggcaccgagtcgggcgaccagagc
gaccagcagggcgaaggtggctcgcgccgcggtcgtcgcagccgtggtcgcggtcgtggc
cgtggccagaacgccgagaacggcgagcagggcggcgaccagaacggtcgcgacaacgcc
ccgaagaccgacgcggcccagaagaacggccagaacggccagaacggccagggccagcag
ggcgagcagaagaacgcccagcaggacgacaagaacgagcaaaagcagaacggccagcag
cagaacggccagcagaagcagcagggccagcagggtcagcagaagcagcagcaggcccag
cagaacgccgacgagaccgagggcggccgcagccgtcgccagcgtgaccgcaagcgcggc
cgcggcgggcagaacgacgagttcgagccggagatcaccgaggacgacgtcctcatcccg
atcgcgggcatcctcgacgtcctcgacaactacgccttcgtgcgcacgaccgggtacctg
ccgggcccgaacgacgtctacgtctccctcggccaggtgaagaagtaccacctgcgcaag
ggcgacgcggtcgtcggtgcgatcaagcagccgcgcgacaacgaacagcacagccgccag
aagtacaacgcgctcgtgaaggtcgactcggtcaacgggcagacggccgaagaggccgcc
gcgcgcgtcgacttccaggacctcaccccgctgtacccgaacgagcgtctccgcctcgag
accgagccctcgaagctcagcacgcggatcatcgacctcgtgtcgccgatcggcaagggc
cagcgcggcctgatcgtctccccgccgaaggccggcaagacggtcgtgctgcaggccatc
gccaacgcgatcgccaagaacaaccccgaggcgcacctcatggtcgtcctcgtggacgag
cggcccgaagaggtcaccgacatgcagcgcacggtgaagggcgaggtcatcgcctcgacc
ttcgaccgtccggcagaagaccacaccacggtcgccgagctcgccatcgagcgtgcgaag
cgcctcgtcgagctgggtcacgacgtggtcctgctcctcgactcgatcacccgtctgggc
cgcgcctacaacctggcgacgccggcctccggtcgcgtgctctccggtggcgtcgactcg
tcggccctctacccgccgaagcgcttcttcggcgccgcgcgcaacatcgaggacggcggt
tcgctgaccatcctcgcgacggcgctcgtcgagaccgggtcgaagatggacgaggtgatc
ttcgaggagttcaagggcaccggcaacatggagctccgcctcaaccgtcacctggcggac
aagcggatcttcccggccgtcgacgtcaacgcgtccggcacccgtcgcgaggagcagctg
ctctccgccgacgaggtcaagatcacgtggcgcctgcgccgtgccctcgccgggctcgac
ccgcagcaggccctcgagatcgtgctgcggaacctcaaggagacgcagtcgaacgtcgag
ttcctggtccaggtgcagaagtcggtccccacgaccggtgggcaccacaacggtcaccag
gagtaa
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