Curtobacterium sp. BH-2-1-1: BJK06_09260
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Entry
BJK06_09260 CDS
T04562
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cub
Curtobacterium sp. BH-2-1-1
Pathway
cub03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cub00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BJK06_09260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cub03021
]
BJK06_09260
03400 DNA repair and recombination proteins [BR:
cub03400
]
BJK06_09260
Enzymes [BR:
cub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BJK06_09260
Transcription machinery [BR:
cub03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BJK06_09260
DNA repair and recombination proteins [BR:
cub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BJK06_09260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AOX65916
LinkDB
All DBs
Position
1944147..1948028
Genome browser
AA seq
1293 aa
AA seq
DB search
MLEATSFDALRIGLATAEDIRQWSYGEVKKPETINYRTLKPEKDGLFGEQIFGPSRDWEC
ACGKYKRVRFKGIVCERCGVEVTKSSVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDM
APKDLEKVIYFAAYMIIDIDEEGRHADMPGLENEMRLEIKNLEGQRDSIIADRLKKLEDD
LAALEEEGAKADVKRRTKDTAEKEMSQVRKSFDEDITRLERVWEDFRNLKVGDLKPEDAV
FHELQDRFGIYFDAYMGAEAIKLRLEAFDLAAEAEALRLQIAEGKGQKKIRAIKRLRVVS
SFLATGNSPAAMVLDVVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLRRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGTGNRALKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHQCGLPKQMALELFKPFVIKRLIDLSHAQNIKSAKRMVERSR
PQVWDVLEEIIRERPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCAAFNADFDGDQ
MAVHLPLSVEAQAEARILMLASNNILKPSDGRPVTLPAQDMIIGLHHLTTVREGAVGEGR
AFSSVAEAILAKDQGTLHLNALVKIRMADVHFAEGEAPEGYEQGDTVLLETTLGRALFNE
TLPANYPFVQKVTDKGVLSAIVNDLAERYSKTETAAALDRIKDAGFYWGTRSGVTVALSD
VVTPPRKKEIIAGYEVQAAKVQGEFDKGLITDAERRADLIKIWTEATNEIAQEMRDNFPV
DNTINRMVSSGARGNWLQVRNIAGMRGLVNNPKGEIIARPIINSYREGLTVAEYFIATHG
ARKGLADTALRTADSGYLTRRLVDVSQDVIIREDDCGTTRGLELPIATVGADGKLVRDPR
VENTVYSRTLATPAVDAKGTVVAEAGEDVGDVLIDKLLAAGVESIKVRSVLTCESSVGVC
AKCYGRSLATGNLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGSASADDITQGLPRVTE
LFEARTPKGASPIAEAPGRATIEDTDKGRRIILTPDNGDEPFIYPVLKRATLLIEDGQHV
ELGEQFIAGTVDPKEVLRVKGVREVQKHLVNGVQDVYGSQGVPIHDKHIEVIVRQMLRKV
TVVDHGDTDLLPGELVDRSRYNELNRAALQEGRKTASARQEVMGITKASLATESWLSAAS
FQETTRVLTQAAMEGKQDHLVGLKENVIIGKLIPAGTGLSRYRDVDVNATEEAKAERYPN
RIFADDSSFSDADLSFVDFDSFSSDDFTPGTYN
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgaagcaacttcatttgacgcactgcggatcggtctcgccacggccgaggacatc
cgccagtggtcgtacggcgaggtcaagaagccggagaccatcaactaccgcaccctcaag
cccgagaaggacggtctgttcggcgagcagatcttcggtccgtcccgcgattgggagtgc
gcctgcggcaagtacaagcgtgtccggttcaagggcatcgtctgcgagcgctgcggcgtc
gaggtcaccaagtcctcggtccgccgtgagcgcatgggccacatcgagctcgccgcgccc
gtcacgcacatctggtacttcaagggcgtcccgtcgcgcctcggttacctcctcgacatg
gcgccgaaggacctcgagaaggtcatctacttcgcggcgtacatgatcatcgacatcgat
gaagagggccgtcacgcggacatgccgggtctcgagaacgagatgcgcctcgagatcaag
aacctcgaggggcagcgcgactcgatcatcgccgaccgcctcaagaagctcgaggacgac
ctcgcagcgctcgaggaagagggcgccaaggccgacgtcaagcgccgcaccaaggacacc
gccgagaaggagatgtcccaggtccgcaagtcgttcgacgaggacatcacccgcctcgag
cgcgtgtgggaggacttccgcaacctcaaggtgggcgacctcaagcccgaggacgccgtg
ttccacgagctccaggaccgcttcgggatctacttcgacgcctacatgggcgccgaggcg
atcaagctgcggctcgaggcgttcgacctggccgccgaggccgaggcactgcgcctgcag
atcgccgagggcaagggccagaagaagatccgcgcgatcaagcgtctgcgcgtcgtcagc
tccttcctcgccaccggcaactcgccggccgcgatggtgctcgacgtcgtgccggtcatc
ccgccggagctgcgcccgatggtgcagctcgacggtggccgcttcgccacgagtgacctc
aacgacctctaccgtcgtgtgatcaaccgcaacaaccgtctccgccgcctgctcgacctc
ggtgcccccgagatcatcgtgaacaacgagaagcgcatgctgcaggaagcggtcgacgcg
ctgttcgacaacggtcgtcgtggtcgtccggtcacgggtaccggcaaccgcgccctgaag
tccctgagcgacatgctcaagggaaagcagggtcgtttccgccagaacctgctcggcaag
cgcgtcgactactcgggccgttcggtcatcatcgtcggcccgcagctgaagctgcaccag
tgcggtctgcccaagcagatggcgctcgagctcttcaagccgttcgtgatcaagcgcctg
atcgacctgtcgcacgcgcagaacatcaagtcggccaagcgcatggtcgagcgttcgcgt
ccgcaggtgtgggacgtgctcgaggagatcatccgcgagcgccccgtgctgctgaaccgt
gcgccgacgctgcaccgtctgggcatccaggcgttcgagccgcagctcgtcgagggcaag
gccatccagctccacccgctcgtgtgtgctgcgttcaacgcggacttcgacggtgaccag
atggccgtgcacctgccgctgtcggtcgaggcccaggccgaggcccgcatcctgatgctc
gcctcgaacaacatcctgaagccgtccgacggccgtccggtgaccctgcccgcacaggac
atgatcatcggtctgcaccacctcacgaccgtccgcgagggcgccgtgggtgaaggccgt
gcgttctcctccgtcgccgaggccatcctcgcgaaggaccagggcacgctgcacctcaac
gcgctcgtgaagatccgcatggcggacgtccacttcgccgagggtgaagcacccgagggc
tacgagcagggcgacaccgtgctgctcgagacgaccctgggccgtgcgctcttcaacgag
accctcccggcgaactacccgttcgtccagaaggtcaccgacaagggcgtgctctccgcg
atcgtcaacgacctcgccgagcgttactccaagaccgagacggccgccgcgctggaccgg
atcaaggacgcgggcttctactggggcacgcgctccggtgtgaccgtggcgctctccgac
gtcgtgacgcctcctcgcaagaaggagatcatcgcgggctacgaggtccaggccgccaag
gtgcagggcgagttcgacaagggtctgatcaccgacgccgagcgtcgcgccgacctgatc
aagatctggaccgaggccacgaacgagatcgcgcaggagatgcgcgacaacttcccggtc
gacaacaccatcaaccgcatggtgtcgtccggtgctcgtggtaactggctccaggtccgc
aacatcgccggtatgcgtggtctggtgaacaacccgaagggcgagatcatcgcccgcccg
atcatcaactcgtaccgcgagggcctgaccgtggcggagtacttcatcgccacgcacggt
gctcgcaagggtcttgccgacaccgcgctccgtaccgcggactccgggtacctcacccgt
cgtctcgtggacgtctcgcaggacgtcatcatccgcgaggacgactgcggcacgacccgg
ggcctcgagctcccgatcgcgaccgtgggcgccgacggcaagctcgtgcgcgacccgcgc
gtcgagaacaccgtgtactcccgcaccctggccaccccggccgtggacgcgaagggcacg
gtcgtcgccgaggctggcgaggacgtcggtgacgtcctcatcgacaagctgctcgcggcc
ggtgtcgagagcatcaaggtgcgctcggtcctgacctgcgagtcgagcgtcggtgtctgc
gcgaagtgctacggccgttcgctcgccacgggcaacctcgtcgacatcggcgaggcggtc
ggcatcatcgccgcccagtccatcggtgagcccggtacccagctgacgatgcgtaccttc
cacacgggtggttcggcctcggccgacgacatcacccagggtctgccgcgtgtcacggag
ctcttcgaggcgcgtacccccaagggcgcgtccccgatcgccgaggcccccggccgcgcc
acgatcgaggacaccgacaagggtcgtcgcatcatcctcacgccggacaacggtgacgag
ccgttcatctacccggtgctgaagcgtgcgacgctcctcatcgaggacggccagcacgtc
gagctcggcgagcagttcatcgccggcaccgtcgacccgaaggaagtcctccgcgtcaag
ggtgtccgtgaggtccagaagcacctcgtcaacggtgtgcaggacgtgtacggctcgcag
ggcgtgccgatccacgacaagcacatcgaggtcatcgtgcgccagatgctccgcaaggtc
accgtcgtcgaccacggcgacaccgacctgctcccgggcgagctcgtggaccgttcgcgg
tacaacgagctcaaccgtgcggcgctgcaggagggtcgcaagaccgcttccgctcgccag
gaggttatgggcatcacgaaggcgtccctcgcgaccgagtcgtggctgtccgccgcgtcc
ttccaggagaccacccgcgtgctcacgcaggcggccatggagggcaagcaggaccacctc
gtcggcctcaaggagaacgtcatcatcggtaagctcatccccgccgggacgggtctcagc
cggtaccgcgacgtggacgtgaacgcgacggaagaagcgaaggcggagcggtacccgaac
cgcatcttcgcggacgactcgtcgttctcggacgccgacctgagcttcgtcgacttcgac
agcttctcgtcggacgacttcacgccgggcacctacaactga
DBGET
integrated database retrieval system
