Curtobacterium sp. BH-2-1-1: BJK06_16590
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Entry
BJK06_16590 CDS
T04562
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
cub
Curtobacterium sp. BH-2-1-1
Brite
KEGG Orthology (KO) [BR:
cub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cub03016
]
BJK06_16590
Enzymes [BR:
cub01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
BJK06_16590
Transfer RNA biogenesis [BR:
cub03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BJK06_16590
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AOX67119
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All DBs
Position
complement(3506677..3507861)
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AA seq
394 aa
AA seq
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MIASREEYLDAVAAIAAGHGSVAVDAERASGYRYSQRAYLIQVFRRGAGAFLFDPIPIGD
FSELQEAIVDEEWLFHAASQDLPCLQEVGLVPTRIFDTELGARIAGFPRVGLGAVVEQLL
GITLAKAHSAADWSTRPLPQSWLVYAALDVELLPDLRDALAAKLDEAGKTRIAEEEFAAV
LTRAPKPPKAEPWRRLSGMHALRGSRALAIARSLWTARDAYAREADIAPGRTIPDSAIVA
AAAANPASKGELSGVKAFTGRASRSELDRWWAAVDEGRTTEDLPRLRGTGEATLPPPRAW
ADRNPAADRRYKAARAAVVQRAEELDLPVENLLTPDTLRTVSWEPPTPIATETVGAVLAA
HDARPWQVEETASIIAHAFVAAAQEPAAESNTES
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgcctcgcgcgaggagtacctcgacgccgtcgccgccatcgcggcgggccacggc
tcggtcgccgtcgacgccgagcgcgcgagcggctaccggtactcgcagcgggcgtacctc
atccaggtgttccgccgcggtgccggcgcgttcctcttcgacccgatcccgatcggcgac
ttctccgagctccaggaagcgatcgtcgacgaggagtggctcttccacgccgcgtcgcag
gacctcccctgcctgcaggaggtcggcctcgtcccgacccgcatcttcgacaccgagctc
ggtgcccgcatcgccgggttcccccgggtcggcctcggtgccgtcgtggagcagctgctc
gggatcacgctcgcgaaggcccactccgccgcggactggtcgacccggccgctcccgcag
tcgtggttggtgtacgcggcactcgacgtcgaactgctccccgacctccgtgacgcgctc
gcggcgaagctcgacgaggcgggcaagacccgcatcgccgaagaggagttcgcggccgtc
ctgacacgggcaccgaagccgccgaaggccgagccgtggcgccgcctgtccggcatgcac
gccctccgtggctccagggcactcgcgatcgcccggtcgctctggacggcacgcgacgcc
tacgcccgcgaagccgacatcgcaccgggtcgcaccatcccggactcggcgatcgtcgcg
gccgcggcggcgaacccggcctcgaagggcgagctgagcggggtgaaggccttcacgggt
cgtgccagccggtccgagctcgaccgctggtgggccgccgtcgacgagggccgcacgacc
gaggacctcccgcggctccgcggcaccggcgaggccacgctgccgccgccccgggcctgg
gccgaccgcaacccggcagccgaccgccggtacaaggccgcacgggccgccgtggtgcag
cgcgccgaggagctcgacctgcccgtcgagaacctgctcacgccggacaccctccgcacg
gtgtcgtgggagccgccgacgccgatcgccaccgagaccgtcggtgccgtgctcgccgcg
cacgacgcccgcccctggcaggtcgaggagacggcgtcgatcatcgcgcacgcctttgtc
gctgctgcacaggagcctgctgccgagagcaacaccgagtcgtag
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