Cuculus canorus (common cuckoo): 104054304
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Entry
104054304 CDS
T08597
Name
(RefSeq) heat shock factor protein 3-like isoform X1
KO
K09416
heat shock transcription factor 3
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cuca03000
]
104054304
Transcription factors [BR:
cuca03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
104054304
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Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
Vert_HS_TF
UPF0242
PEARLI-4
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
104054304
NCBI-ProteinID:
XP_053931782
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Position
10:complement(267307..281815)
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AA seq
559 aa
AA seq
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MREGTALPGGPAAPAPVPVPAPAPVPGFLAKLWALVEDPHSDHVICWSANGENFCILDEQ
KFAKELLPKYFKHNNISSFIRQLNMYGFRKVVALENGMITAEKSSVIEFQHPFFKQGKAH
LLENIKRKVSAVRTEDLKVCTEDLHKVLTEVQEMREQQNNMDVRLANMKRENKALWKEVA
VLRQKHSQQQKLLSKILQFILSLMQGNYIVGVKRKRSLTDAAGASTSKYSRQYVRIPVES
SQAMTFSEHNGGDEDGNGTGLIIRDITDTLENPTDGLLAVAHTSSRAGETQAALDPGLPV
CQVSQPNQLDCAEPRPPFHVSDVPKRSEMGNAAVELHTSQPSAPEDPVSVIDSILNENNS
GGQNDPLLDREEIQDFLNCIDASLEELQAMLSGKQYNFGSEAFSDTLNPELPALDMGLME
ASPGMENIASLAESAEDLGVSERETTGSKDMQLIQYRANPLLSLFEELPSSDTAGKMEDP
KDLLLPALEEKPAPHPLSDSETVLPLAAPASQAEPLDALGMGDPPLLSEDANGEYKLFPL
LLLSPVANFIEEASEIETS
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgagggcacggcgctgcccggcggccccgccgcgcccgcgcccgtgcccgtgccc
gcgcccgcgcccgtgcccgggttcctcgccaagctctgggcgctcgtggaggacccgcac
agcgaccacgtcatctgctggagcgcgaatggcgagaacttttgcatcctagatgagcag
aagtttgctaaggagctgctccccaagtacttcaaacacaacaacatctccagcttcata
cgacagcttaacatgtatggcttcaggaaggtagttgctctggagaatggtatgatcaca
gcagagaagagttctgtcattgagtttcagcatcctttcttcaagcaaggcaaggcacat
ttactggaaaacatcaagcgcaaggtctctgcagtaagaactgaggatctcaaggtctgc
acagaggacttgcacaaagttctcacagaagttcaggaaatgagagagcagcagaacaac
atggatgtcaggctggctaacatgaagagagaaaataaagccctgtggaaagaagtggca
gttctgaggcagaagcacagccaacaacagaagctgctgtctaagattcttcaatttata
ctaagcttgatgcaaggaaattatattgttggggtcaaaagaaaaaggtctctgacggac
gctgcgggtgcttcaacctccaaatacagtcgtcagtacgtccgcattcctgtggagagc
agccaggcgatgactttctctgaacataatggaggtgatgaggatggaaatggtactggt
ctcatcattcgagatatcactgataccctggaaaatcccacagatggtctccttgctgtc
gcacacacgagcagcagagccggagagacgcaggcagctctggatcctggcttacctgtt
tgccaagtatcgcagccaaaccagctggattgtgcagaacctcgcccaccgtttcatgtc
agtgatgtccccaaacgcagtgaaatggggaatgctgcagtggaacttcatacttcacag
cccagtgctccagaagaccctgtgtcagtgattgactccatcttgaatgagaacaactct
ggaggccaaaatgatcctttgctggacagagaggaaattcaggattttctcaattgtatt
gatgccagccttgaagaacttcaagcaatgttatctgggaagcagtataacttcggctca
gaagcattcagcgatacgcttaatcctgagctaccagccctagatatgggcttgatggaa
gcttcccctggtatggaaaatatcgcaagcttggcagagagcgctgaagatctgggagtg
agtgagcgagaaaccacaggaagcaaagatatgcagctgatacagtaccgggccaaccct
ctgctctccttattcgaagagcttccttccagtgacactgcagggaaaatggaggatccg
aaagaccttctgttgcccgccttggaggagaaacctgctcctcatccgctgtcagatagt
gaaactgtcttgccgctagcagctccagcaagccaggctgagcctctggatgctctggga
atgggtgatccccctctcctctcagaagatgcaaatggagagtataaactgtttccactc
ttgctcctcagtcctgttgctaacttcatagaagaggcctccgagatagaaacttcttga
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