Cuculus canorus (common cuckoo): 104054353
Help
Entry
104054353 CDS
T08597
Symbol
THSD4
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4 isoform X1
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
104054353 (THSD4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cuca04990
]
104054353 (THSD4)
Domain-containing proteins not elsewhere classified [BR:
cuca04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
104054353 (THSD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
TSP_1
ADAMTS_CR_3
TSP1_spondin
PLAC
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
104054353
NCBI-ProteinID:
XP_009553630
LinkDB
All DBs
Position
12:21435303..21698115
Genome browser
AA seq
1027 aa
AA seq
DB search
MVDSLIVSLRLLSSLAVLAFQFVVPQPSIEHRKVPQRIEEQRDASEDSGAGIPGMWGSWG
PWSACSRSCSGGVMEQTRPCLPAYYRDRGYRRPGRQYPASERTLAHQNSRHREDSLTAYP
GHVISAIRTSVPLHRNEEQLWAGLHTSAASGGHNNSHLSRGALRGSRHSQSQRQSAKPEK
RTRTRNPIGPGKYGYGKVPYILPLQTDTGQQPQKLRRQRQSSRNHVFHQNPSLMNTYSQV
ASPSLQHGNLYQEESGPQAGHEVLGPSVYQSSSFPVSPSLFHGSDSTPHGAASHQAVQAQ
PQAQRAAAIVCIGTYKQYKLCNTNMCPESSRNIREVQCASYNNKPFMGRFYEWEPFAEVK
GSQKCELNCRAIGYRFYVRQAEKVIDGTPCDQNGTSICVAGQCKSIGCDDYLGSDKVIDK
CGICGGDNTACKVVSGVFKHTLTNLGYHKIVEIPEGATKINITEMSKSNNYLALRSRSGR
SIINGNWAIDRPGRYEGGGTMFTYKRPNEISSTAGESFLADGPTNEVLDVYMIHQQPNPG
IHYEYIIPGDNVISSQLLAHRRPGEPLNGQLGMPESTNHEDEDLRRETDALTGQPAGTFP
VIQTGRFPSHQPENHVPAVQPPRQNREYNWKQIGKTECSTTCGKGSQYPVFHCVNRITHE
EVSESYCDSSTKPVPEEEACNLFPCPAFWDIGEWSECSKTCGLGMQHRQILCRQMYANRT
LTVQQYRCHHLEKPETTSTCQLKICSEWQIRTEWTSCSVPCGVGQRTRDVKCVSNLGDVV
DDEECNMKLRPNDIENCDMGPCAKSWFLTEWSDRCSAECGDGVRTRSVVCMTNHVSSLPL
EGCGNNRPSETTTCNNGPCAGKVEWFAGGWTQCSSECGSGTQQREVICVRKTEGNFDVLN
PYECSYLEKPPSQQSCYLKPCGSKWFHTEWSTCSKSCEGGFRVREVRCLSDDMTASTHCD
PQLKPEEKEPCNTQDCIPEIDENCKDKYYNCNVVVQARLCVYTYYKTACCASCTRVANRQ
SGFLGRR
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atggtagacagtttaatagtttctttgagacttctcagttccctagcagtgctggcattt
cagtttgtcgtcccacagccttcaattgaacacagaaaggttccccagaggatagaagag
caaagagatgcatctgaggatagcggcgcaggaatcccaggcatgtggggaagttggggc
ccctggtccgcctgctctcggagctgcagtggcggtgtgatggagcaaacacggccctgc
cttccagcctattaccgggacaggggctaccgacggccgggacggcagtacccggcctca
gagagaactcttgctcaccagaattcccgccaccgcgaggactcgctgactgcttaccct
ggccatgtcatttctgccatccgtacatccgtgccgcttcacaggaacgaagagcagctt
tgggctggccttcacacctctgctgcttctggagggcataacaacagccacctgagccgg
ggcgccttgcggggcagcaggcattcgcagtcccagaggcagagtgccaagccagaaaag
agaaccagaaccagaaatcctattggtccaggaaagtatggatatggaaaagtgccatac
attttacctttacaaactgatactggtcagcagcctcagaagcttcggaggcagcgtcag
tcatcaaggaatcacgtctttcatcagaatccaagtctcatgaacacttacagccaggtg
gctagtccttcacttcaacatgggaatctttatcaagaggaaagtgggcctcaggccgga
catgaagtcctgggaccctcagtttatcagtcatcttcgtttcccgtgtctccaagcctg
ttccacggcagtgactcgacccctcacggggctgcctcgcaccaggcagtgcaggctcag
ccccaggcgcagagggctgcagcgattgtgtgcattggcacctacaagcagtataaactc
tgcaacacaaatatgtgtcctgaaagcagcagaaatattagagaggtgcaatgtgcatca
tacaataacaagccgtttatgggtcgattttatgaatgggaaccttttgcggaagtgaag
gggagtcagaagtgtgagctgaattgccgtgcgataggctaccgattctatgtgcgacaa
gctgagaaggtgatagacgggacaccctgcgaccagaacgggacgtcgatctgtgtggcc
gggcagtgcaagagcattggctgtgatgactacctgggttcagacaaagtgatcgacaag
tgtgggatatgcggaggggacaacactgcttgcaaggttgtgtctggagttttcaaacac
acgctaacaaatctcggctaccacaagatagtggaaattcccgaaggagctactaaaatc
aacattactgagatgtcaaagagcaacaactatttggcgttgcggagtcgatcgggacgg
tccatcatcaatggaaactgggcgattgatcggcctgggagatatgaaggtggtgggaca
atgttcacttataaacgcccaaatgaaatctccagcactgcaggagagtcgtttttagct
gatggtccaacaaatgaagtccttgatgtctatatgatacaccagcagcctaacccaggc
atacattatgagtacatcatcccaggagacaatgtcattagttctcaattgcttgctcac
aggaggccaggggagcccttgaatggtcagttaggaatgccagaaagtacaaaccatgag
gatgaggatttgcgaagggagactgatgctctcactggacagccagctggaactttccca
gttattcagacaggaagatttccttctcatcagccagaaaaccacgtgcctgctgtgcag
ccaccaaggcaaaacagagaatacaactggaaacagattggaaaaactgagtgcagtact
acgtgtggaaaagggtcacagtacccagttttccactgcgtcaacagaatcactcatgag
gaggtgtctgagagttactgtgacagcagcaccaaacccgttccagaagaggaggcctgc
aacctcttcccatgtccagctttctgggacataggggagtggtctgagtgcagcaaaacc
tgtggccttggcatgcagcatcgacagatcttgtgccggcaaatgtacgccaatcgcacc
ttgacagttcagcaataccgctgccatcacctggaaaagccagagaccaccagcacctgc
cagctgaagatctgcagtgaatggcagatcaggacagagtggacttcgtgttcggtgcct
tgtggagtggggcagaggaccagggatgtgaaatgtgtcagcaatcttggggatgttgtt
gatgatgaggagtgtaacatgaagctgcggccaaatgatattgagaactgtgacatgggt
ccctgtgctaagagctggttcctgacagagtggagtgacaggtgttctgctgagtgtggc
gatggagtccgtacgcgttcagtggtttgcatgacgaaccacgtcagcagtttgcctctg
gaaggctgcggcaataacagaccctctgaaacaaccacctgtaataatggaccctgtgct
ggcaaagtggaatggtttgccgggggctggacacagtgctctagtgaatgtggcagtgga
actcaacagagagaagttatttgtgttaggaaaactgagggcaattttgatgttttgaac
ccctatgaatgctcatatttggaaaaacctcccagccagcaatcctgctacctcaaaccc
tgtggatctaaatggtttcatacagaatggagcacatgttccaagtcctgtgaaggcgga
tttcgggtccgagaggtacgatgtctatcggatgacatgacagccagtacccactgtgac
ccacagctcaaacctgaagaaaaagaaccgtgtaacacacaagattgtattcctgaaata
gatgagaactgcaaagataaatactacaattgcaatgtggtggttcaggcccggctctgc
gtctacacctactacaaaacagcctgttgtgcatcctgtacgcgtgtggcaaaccgacag
tcaggcttcctgggacgcagataa
DBGET
integrated database retrieval system
