Cuculus canorus (common cuckoo): 104054354
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Entry
104054354 CDS
T08597
Symbol
ARID5B
Name
(RefSeq) AT-rich interactive domain-containing protein 5B isoform X1
KO
K25857
AT-rich interactive domain-containing protein 5
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cuca03000
]
104054354 (ARID5B)
Transcription factors [BR:
cuca03000
]
Eukaryotic type
Helix-turn-helix
ARID
104054354 (ARID5B)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ARID
BAH
Motif
Other DBs
NCBI-GeneID:
104054354
NCBI-ProteinID:
XP_053927544
LinkDB
All DBs
Position
7:complement(9459381..9582020)
Genome browser
AA seq
1188 aa
AA seq
DB search
MPLPCCCSPQWVGAPCGSHGPYVFYRAFRFQRRGGGRARVLSLGDFFFVRCRAEEPACIA
ELQLLWEERTSRQLLSSAKLYFLPEDTPQGRTSDHGEDEVIAVSEKVTVKLEDLAKWAQS
DFSKWKCGFRAEPVKPIDVGKNGQKEALMRYRQSTLNSGLNFKDILKEKADLGEDDEDSN
LLILSYPQYCRYRSMLKRIQDKPSSILTDQFVLALGGIAVTSKNPQIFYCRDTFDHPTLI
ENESICDEFAPNLKGRPRKKKPCPQRRDSLNGIKDSNNNSESKAVAKVKCEAKSALPKPK
SNNSNCKKGSSEDKSKIAIGEECRADEQAFLVALYKYMKERKTPIERIPYLGFKQINLWT
MFQAAQKLGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILPYERFIKGEED
KPLPPVKPRKQDNSSQEGEVKTKVSGTKRIKNENQKSKKEKDNAQKPQDASEVSSEQEKD
QESADQKNFPEHPAVGDIKQPVQGPPSLLPEATRPLPLEKTDLTENSTNSEKAKEEVQHS
SSFSSISMPPEEDIVLDATITKRLQPPADVLEDTKPEQKLQKGFTESLESEPPEMPFTAF
PVPLPTQSDMEDDKLPEMADYIANCTVKVDQLGNEDIHNALKQTPKVLVVQNFDMFKEKE
LHGSMNDDSTFGYTPLLYSKGNPGIMSPLAKKKLLSQVSGAALSCSYPYGSPPPLISKKK
LNSRDELSSSISQGPHAPNSDPVAINRPSVIQHVQSFKTKEDRKSINDVFKHDLLCKPDP
QRCDFSKHHLSSLAESYVPKTDIQDCKDKMSEKRALQHSHVPTFLADFYSSPHLHSLYRH
TEHHLNNEQTSKYLPRDMFRESENISTFTQHKHQEKLNLNYRPSLHQQEKKAAVEASSDD
QPTDLSLPKSIHKQTAKAPGSRHPHSSMAQQEGKGISPFQAASSQAVSLDCNPKACRVSP
MAMTAPKKHSELLHRSGKQHTQRLENLRKMEGMVHPIISRRTSPQNVGTARPLKRSLEDL
DKVISEKKIRAVSPLHLPKETPVKDKVPDPEGEGSKPVHGLHSGSMLESHKFPLSAPIFP
GLYPGSLCTGLNNRLPPGYSHPLQYLKNQTVLSPLMQPLALHSFMVQRQFLTSPANSQQL
YRHLAAATPVGSSYGDLLHNSIYPLAAINPQAAFPPSQLSSVHPSTKL
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgccgtgttgttgttccccgcagtgggtcggcgccccgtgcggctcgcacggc
ccctacgtgttctacagggcgttccgcttccagcgccgcggcggcggccgggcgcgggtc
ctctccctcggagacttcttcttcgtgcggtgccgcgcggaggagcccgcctgcatcgcg
gagctgcagctgctctgggaggagcgcaccagccggcaacttctttccagcgccaaactt
tattttctccccgaggacaccccccagggcaggaccagtgaccatggcgaggatgaagtt
attgctgtttcagagaaagttactgtgaagcttgaggacttggcaaaatgggcacagtcc
gacttctccaagtggaagtgtggtttccgggctgagccagtcaagccgatagatgtgggc
aagaatggacagaaggaggctttgatgagatacagacaatccacgctcaacagcggcttg
aacttcaaagacatcctgaaggaaaaggctgaccttggtgaggatgatgaagattcaaac
ctgctaattctcagctacccacagtactgtcgatatcgttccatgttaaagcgcattcag
gacaagccttcttcaatattaacagatcagtttgttttagccctgggaggcattgcagta
acaagcaagaacccccaaatcttctactgtcgggatacatttgatcatccaactctaata
gaaaatgaaagtatatgtgatgagtttgcgccaaatcttaaaggcagaccacgcaaaaag
aagccttgcccacagagaagagattcattaaatggcattaaggattccaacaataattct
gaaagcaaagctgttgccaaggtaaaatgtgaggctaagtcagctttgcccaaacccaag
agtaacaacagcaactgtaaaaaaggctcaagtgaggataaatcaaagattgccataggt
gaagaatgcagagctgatgagcaggctttccttgtggctctctataaatatatgaaagaa
aggaaaacaccaattgaacgaataccctatttaggttttaagcagattaacctttggact
atgtttcaagctgctcaaaaactgggaggatatgaaacaataacagcccgtcgacaatgg
aaacatatttatgatgaattaggtggtaaccctggaagcacaagtgctgctacatgtact
cgcagacattatgaaagattaatcctgccgtatgaaagatttattaaaggagaggaagat
aagccactgcctccagtgaaacctcgaaaacaggataacagttcccaggagggtgaagtg
aaaacaaaagtgtctggaacaaaacgcatcaaaaatgaaaaccaaaagagcaagaaggaa
aaagataatgcacagaaaccccaagatgcatctgaggtttcatcagaacaagagaaggat
caagaatcagcagaccagaaaaatttccctgaacatcctgcagtgggagatataaaacaa
cccgtgcaaggccctccatctcttttaccagaggcaactcggccactgcctctggaaaag
acagacttgacagaaaacagcacgaacagtgagaaggccaaggaggaggttcagcactcg
tcctctttttcaagtatatccatgcccccagaagaagacatagtgctggatgccaccatc
acgaaacgattacaacccccagcagatgtcctagaagacacaaagcctgaacaaaaactc
cagaaaggttttactgagagtttagaaagcgaacccccagaaatgcccttcacggctttt
ccagtcccactacctactcagagcgacatggaagatgacaaattgccggagatggccgat
tacatcgcaaactgcacagtgaaagtggaccagctgggaaacgaagatatccacaacgca
ctaaagcaaacgcccaaagtactggtagtccagaacttcgacatgtttaaggaaaaggag
ctgcacgggtccatgaacgatgactccacttttggttacacaccactgctctactcaaag
ggtaatccaggcatcatgtcacccctggcaaagaagaagctgctgtcacaggtcagtggt
gcagccctgtcatgtagctatccttacggttctcctccccctttgatcagcaaaaagaag
ctgaacagcagagacgaactgtcctcaagcatatcgcaaggtccccatgcccctaattct
gatcctgtagcaattaataggccctcagtcatacaacacgtacagagttttaaaaccaag
gaagacaggaaatcaattaatgatgtttttaaacatgacttgctatgtaaaccggatcct
cagcgctgtgatttttcaaaacatcacctcagttctcttgccgagtcgtacgtaccgaag
acagatatccaggactgcaaagataaaatgagtgagaaaagggcactgcagcactcccat
gtgcccactttcttggcagatttttattcatcacctcatctgcacagcctttataggcac
acagaacaccaccttaataatgaacagacatcaaagtacctcccccgggacatgttcaga
gagtctgaaaatatttctacttttactcaacacaaacaccaagaaaaactaaatttaaat
tatcgcccatctttgcatcagcaagaaaaaaaggcagcagtggaggcctcttcagatgat
cagccaacagatttgagtcttccaaagagcatacacaaacagactgcaaaagctccaggc
tccaggcaccctcattcatccatggcccagcaagaaggcaaaggtatctccccgttccag
gcagcgagcagccaggcagtgagcctagactgtaaccccaaagcttgccgtgtgtcaccc
atggccatgactgccccgaaaaaacacagcgagttgctccatagatctgggaagcagcac
acccagaggctggagaatctgaggaagatggagggcatggtgcatcctatcatcagccgc
agaacaagccctcaaaacgtggggaccgctcggcctttgaagaggagcctggaagatttg
gacaaagtcatttcagaaaaaaaaatccgagctgtctctcctctgcacttaccaaaggag
actccagtgaaagacaaggttcccgacccagaaggggaaggcagcaagccggtgcatggt
ctccattctggcagcatgctggaaagccacaaatttccgctttcggcccccatcttccca
ggcttgtatccgggaagcctgtgcacagggttgaacaatcgcctcccacccgggtattct
catcccctgcagtacttgaaaaatcagactgtgctctccccactaatgcagcctttggct
cttcactccttcatggtgcagagacaattcctcacatcccctgcaaactctcagcaactg
tacagacacttagctgcagcaacacctgtaggaagttcctacggtgaccttttgcataac
agcatttatcctctagctgctataaaccctcaagccgcgttcccaccttcccagctgtcc
tctgtacatcccagcacaaaactgtaa
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