Cuculus canorus (common cuckoo): 104054398
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Entry
104054398 CDS
T08597
Symbol
FTSJ3
Name
(RefSeq) pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3
KO
K14857
AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cuca03009
]
104054398 (FTSJ3)
Ribosome biogenesis [BR:
cuca03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
104054398 (FTSJ3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spb1_C
FtsJ
DUF3381
Motif
Other DBs
NCBI-GeneID:
104054398
NCBI-ProteinID:
XP_053944700
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All DBs
Position
25:complement(3265724..3274506)
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AA seq
839 aa
AA seq
DB search
MGKKSKLGKSRRDKFYHLAKETGFRSRSSFKLLQLNRKFQFLQKARALLDLCAAPGGWLQ
VASKFMPVSSLIIGVDLVPIKPIPNVVTLQEDITTEKCRQALRKELQTWKVDVVLNDGAP
NVGASWVHDAYSQANLTLMALKLACEFLCKGGWFITKVFRSRDYQPLLWIFQQFFSKVQA
TKPQASRNESAEIFVVCQGYQAPDKIDSKFFDPKYAFKEVEVPTKSVSELVSKKKPKAEG
YADGDMTLYHRFTLMDFLKAPNPVDFLSKANEITLGDGELENHSSTTEELRQCCKDIRVL
GRKELRALLNWRTKLRRFLAKKLKEQAKELDINLSSGEEEEGKEEEEKEKEKKSLPGATA
DEVVNEDEEEVELALTEMKAKELAELKRKKKKILKEQRKQRERVELKMDLPGVSIADDGD
TSMFSLRTIHKTPLLNELSRGDMASADALLEMGPGDDDIYVSDHEEDDDVSLASDLDPEE
LLEIEARQRRLERERREQGAKRGKLKQKEEVEEEGEEEENPLLVPLEEKSVLEERQTSLW
FGKDAFAGIEDNADEELELGQSQMLAEKQRESQRDKATKKEQMKKKPQEESPAEAPPAAD
TGPDAGKVQDEESSDDDSSSDEERPLIPAGKKRGRVEPCGFEVVPIEDPVKRARVLDAEG
LALGSVIATSKKARRDLIDDSFNRYSFNEDEGELPEWFTEEEKQHRRKQIPVDRQTVEAY
RQRWREINARPIKKVAEAKARKKRRMLKKMEQMKKKAEAVVNTVDISEREKVAQLRRIYK
KAGLAKEKRQVTYLVAKKGVGRRVRRPPGVKGQFKVVDSRLKKDTRAQKRKEQKKKRHK
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagaaaagcaaactgggcaagagccgacgggacaagttctaccacttggccaag
gagaccggctttcgctcccgctcctccttcaagcttctgcagctcaataggaagttccag
ttcctgcagaaggctcgggcgctgctggacctgtgtgcggctcctggcgggtggctgcag
gtggcttccaaatttatgccagtttccagcttgatcatcggagtggacttggtccctatt
aagcccattcccaatgtggtgacgctgcaggaagacatcaccactgagaaatgccgccag
gccttgcgcaaggagctgcagacgtggaaggtggatgttgtgctgaacgacggagcaccc
aacgtgggagccagctgggtgcatgatgcctactcccaagccaacctgaccctcatggct
ctgaagctggcctgcgaattcctgtgcaaaggtggctggttcatcaccaaggtttttcgt
tcccgggactaccagcctctcctttggatcttccagcagttcttcagcaaggtccaggcc
accaagccccaagcctctcgcaatgaatccgctgagatctttgtggtgtgccaaggttat
caggctccagacaaaatcgacagcaagttttttgaccccaaatacgctttcaaggaggtg
gaggttccaactaagtctgtcagtgagctggtcagcaaaaagaaaccgaaggcagaaggc
tatgcagatggcgacatgaccctctaccaccgcttcaccctgatggacttcctcaaggct
cccaaccccgtggacttcctctccaaggccaacgagatcacactgggggatggtgagctg
gagaaccacagttccaccacagaggagctgcgtcagtgctgcaaggacatccgtgtgctg
ggacgcaaagagctcagagccctgctgaactggaggacgaagttgcggcgtttcttggcc
aaaaagctgaaggagcaggcgaaggagctggatatcaacctgagctctggtgaagaggag
gaaggcaaagaagaagaggagaaagagaaggagaagaagagcttgccaggagctacagct
gatgaggtggtgaatgaggacgaagaagaggtagagctggcgttgacggagatgaaggcc
aaggagttggcagagttgaagagaaagaagaagaagatcctgaaggaacagcggaagcag
cgcgagcgtgtggagctgaaaatggacctccctggtgtctccatcgctgatgacggtgac
accagcatgttctccctccggactatccacaagaccccgctgctgaacgagttgagccga
ggggacatggcgtcagcagatgccctcctggagatgggacctggggatgatgacatttat
gtctcagatcacgaggaagacgatgatgtgtccctggccagcgatctagacccagaggaa
ctgcttgagatagaagcccgtcagcgccggctggagcgggaaaggcgagagcagggtgca
aagagggggaagcttaagcagaaggaagaggtagaggaggaaggggaggaagaggagaat
cccctgctggtgcccctggaggagaagtcagtgctggaggaacggcagaccagcctgtgg
ttcgggaaggacgcctttgccggcatcgaggacaatgcggatgaggagctggagctgggg
cagtcacagatgttggctgagaaacagcgcgagtctcagagagataaagcaacaaagaaa
gagcagatgaagaagaaaccccaggaagaatctccagctgaggccccgcctgccgcagac
acaggacccgatgctggtaaagtgcaggatgaggagagcagcgatgacgacagcagcagt
gacgaagagaggccactgattccggcagggaagaagcggggccgtgttgagccatgtggc
tttgaggtggtgcccattgaggacccagtgaaaagagcccgtgtcctggacgccgagggc
ctggcgcttggctctgtcatcgccacctctaaaaaggccaggagggacctgattgatgac
tccttcaacaggtattctttcaacgaggatgagggagagctgccagagtggttcactgag
gaggagaagcagcaccggcgcaagcagatccccgtggaccggcagacggttgaggcgtat
cgacaacgctggcgtgaaatcaatgcccgccccatcaaaaaggtggcagaggccaaggcc
cgcaagaagcggcggatgctgaagaagatggagcagatgaagaagaaagcagaggccgtg
gtgaacactgtggatatctcagagagggagaaggtggcccagctgcggcgtatctacaag
aaggctgggctggccaaggagaagcgtcaggtcacctacttggtggctaagaaaggcgta
ggacgccgggtgcgccgtcctcctggcgtcaagggccagttcaaggttgtcgacagtcgc
ctgaagaaggacacaagggctcagaaacgcaaagaacagaagaaaaaacgccataagtga
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