Cuculus canorus (common cuckoo): 104054427
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Entry
104054427 CDS
T08597
Symbol
TOP2A
Name
(RefSeq) DNA topoisomerase 2-alpha
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cuca03032
]
104054427 (TOP2A)
03036 Chromosome and associated proteins [BR:
cuca03036
]
104054427 (TOP2A)
Enzymes [BR:
cuca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
104054427 (TOP2A)
DNA replication proteins [BR:
cuca03032
]
Eukaryotic type
DNA Topoisomerases
104054427 (TOP2A)
Chromosome and associated proteins [BR:
cuca03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
104054427 (TOP2A)
Centrosome formation proteins
Centriole proteins
104054427 (TOP2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
DTHCT
HATPase_c
Toprim
Motif
Other DBs
NCBI-GeneID:
104054427
NCBI-ProteinID:
XP_053944060
LinkDB
All DBs
Position
25:complement(2417235..2438873)
Genome browser
AA seq
1560 aa
AA seq
DB search
MMLHESPPALRAVDENQRAPKGDGIRKQLSVEHIYQKKTQLEHILLRPDTYIGSVELVTQ
QMWVFDEDVGLNCRDVTFVPGLYKIFDEILVNAADNKQRDKSMSCIKVTIDVENNTISVW
NNGKGIPVVEHKVEKVYVPALIFGQLLTSSNYDDNEKKVTGGRNGYGAKLCNIFSKKFTV
ETACREYKKLFKQTWTDNMGKAGEMILKQFDGEDYTCVTFQPDLSKFKMKTLDKDIVALM
SRRAYDIAGSTKDVKVFLNGQRLPVKGFRSYVDLYVKDKVDETGNALKVIHEEVNSRWEV
CLTLSERGFQQVSFVNSIATTKGGRHVDYVADQLVTKIIDVVKKKNKNGVGVKPFQVKNH
MWIFVNALIENPTFDSQTKENMTLQAKNFGSTCKLSEKFIKGAVGCGIVESILNWVKFKA
QSQLNKKCSAVKHTKIKGVPKLDDANDAGSKNSLDCTLILTEGDSAKTLAVSGLGVVGRD
KYGVFPLRGKMLNVREASHKQIMENAEINNIIKIVGLQYKKNYEDQESLKTLRYGKIMIM
TDQDQDGSHIKGLLINFIHHNWPSLLRHNFLEEFITPIIKVSKNKEEIAFYSIPEFEEWK
SSTQNYNSWKIKYYKGLGTSTSKEAKEYFADMAKHRIGFKYSGPEDDAAITLAFSKKKVE
ERKEWLTNFMEDRRQRKLHGLPEEYLYGKNTNYLTYNDFINKELVLFSNSDNERSIPSLV
DGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGEASLMMTIINLAQNFVGSN
NLNLLQPIGQFGTRLHGGKDSASPRYIFTMLSPLARLVFPPMDDNILRFLYDDNQRVEPE
WYMPIIPMVLINGAEGIGTGWSCKIPNFDIREVVNNIRRLMDGEEPLPMLPSYKNFKGTI
DELGPNQYVISGEVSILNSTTIEITELPVRTWTQTYKEQVLEPMLNGTEKTPPLIVDYKE
YHTDTTVKFIVKMTEEKLAEAEAVGLHKVFKLQTNLTCNSMVLFDHVGFLKKYDSPQDIL
KEFFELRLRYYNLRKEWLIGMLGAESAKLSNQARFILEKIDGKIVIENKPKKELIKVLIQ
RGYESDPVKAWKESQNKEEEEEEEEGEDSEKESAAATGPDFNYLLNMPLWYLTKEKKDEL
CKQRDNKEKELENLKRKSPSDLWKEDLAAFVEELDAVEAKQAQDEMAGVVGKPLKMKGGK
MKVKKAQLPEVMPSPHGIRVVPRITAEMKAEAEKRTKKKIKTERNEFDENQEENTPGDKE
PSGLKQRLVQKLNTERGAKRQATLPFKPLKKMKKRNPWSDSGSDSESDFEAPPQRERLVR
QAAAKVKTIISSDSEEAYLSGSDEGSEFLGDSEGNNESDTSTKQKPAPKPKAAPKETTEK
AAKASKQKPAQSAIPVQVHDVTDEDVNQAPAAPSVPVPRSNTVAKKPAAAKKTSATKDNQ
PSIMDILAKKKAPPKASKTATKEASLDPEAGAAGSKKPAQTKGRKVTKRQPSSLDSDSDF
GSKPSKSVAAKKSKPLDDDSFTVDSTARADSPVAAEPRARPGRTKKPVQYLESSDEDDMF
NT seq
4683 nt
NT seq
+upstream
nt +downstream
nt
atgatgctccacgagtccccgccggccctgcgggccgtggatgagaaccagcgtgcacct
aagggagatggcatcaggaagcaactctcggtggagcatatctaccagaaaaagacacag
ctagagcacatcctgctccggcccgacacctatattggctccgtggagctggtcacccag
caaatgtgggtttttgatgaggacgtgggccttaactgtagagatgtgacctttgtgcct
ggcttatacaaaatctttgatgagatcctagtcaatgctgcagacaacaagcagagggat
aaaagcatgtcgtgcattaaagttacaattgatgtagagaataacacaatcagtgtgtgg
aacaacgggaaaggtattccagtagttgaacacaaagtggagaaggtctacgtgcctgct
cttatctttggacagctgctaacatccagcaactacgatgacaatgaaaagaaagtcaca
ggtgggcgaaatggttatggagccaaactgtgcaacatatttagcaaaaaatttactgtg
gaaactgcatgtcgtgaatacaaaaagttgttcaagcagacctggacagacaacatggga
aaggctggtgaaatgatactgaaacaatttgatggagaagattacacgtgcgttactttc
caacctgatctgtcaaaattcaaaatgaaaactcttgataaagacattgtagcactgatg
tctcgaagagcgtatgatattgctggatccacaaaggatgtcaaagttttcctaaatgga
cagaggctgcctgtaaaaggattccgtagttacgtggacctctatgtcaaggacaaagta
gatgaaactggtaatgcacttaaggttatccacgaggaagtaaattctcggtgggaagtg
tgtttgactttaagtgaaagaggcttccagcaagttagctttgtcaacagcattgccact
acaaagggtggcaggcacgttgattacgtagctgaccagcttgtgactaaaatcattgat
gttgtgaaaaagaagaacaaaaatggagttggagtgaagccttttcaggtgaagaaccat
atgtggatttttgtcaatgccctgattgaaaatccaacctttgattctcagactaaggag
aacatgactctgcaggcaaagaactttggctcaacctgtaaactgagtgaaaaatttatt
aagggtgcagttggctgtggcattgttgaaagtatcctaaactgggtaaaatttaaagct
cagagccagctgaataagaaatgttcggccgtgaaacacactaagattaagggtgttcct
aagctggacgatgccaatgatgctggcagcaagaattctttagattgtacacttatcctg
actgagggagactcagccaaaacactggctgtttctggtctgggagtagttggtagagac
aagtatggagtatttccccttcgtgggaaaatgctcaacgtcagagaagcttctcacaag
cagattatggaaaacgctgaaatcaacaacatcatcaagattgtgggtttacaatataaa
aagaactatgaagatcaagaatctttaaagactcttcgctatggaaagattatgatcatg
acagatcaggatcaagatggatcacatatcaaaggtttgctaattaacttcatccatcac
aactggccttctcttctaagacataactttttggaggaatttatcactcctatcataaag
gtctctaaaaacaaagaagaaatcgcattctacagcattcctgaatttgaggaatggaaa
agcagtacgcagaactacaattcgtggaaaataaagtattataaaggtctgggtaccagc
acatcaaaagaggctaaagagtactttgcagatatggctaaacatcgtattggcttcaaa
tattctggtcctgaagatgatgctgcgatcaccctggcctttagcaagaagaaggtagaa
gagcgaaaggagtggctgactaatttcatggaggatagaagacaacggaagctgcatggt
ctgccagaggaatacctatatgggaaaaatactaattatctgacgtacaacgacttcatc
aacaaggagttagtcctgttctcaaactcggataatgaaagatcaattccgtcactggtt
gatggtttgaagccaggtcaaagaaaagttcttttcacgtgtttcaaacgaaatgataag
cgggaggtgaaggttgcgcagctggctggttctgtagctgagatgtcctcataccatcat
ggtgaagcatcgctgatgatgaccattattaacttagctcagaacttcgtgggcagtaac
aacctcaacttgctgcagcctattggtcagtttggcacaaggctgcatggtgggaaagac
tctgccagccctcgatacatctttacaatgctcagcccactggcgcggttggtgttccca
ccaatggatgacaacatcctgaggttcctttatgacgacaatcagcgtgtggagccggaa
tggtatatgcctatcattccgatggtgctgataaacggggcagaagggattggtactggc
tggtcctgtaagatccccaactttgatatcagggaagttgtgaataatatccgtcgtctg
atggatggagaagagccactgccaatgcttcctagctacaagaatttcaaaggcacaata
gatgagctgggacctaatcagtacgtgataagtggtgaagtgtctatcctcaattctaca
accatagagatcactgagctgcctgtcagaacatggacccagacttacaaagaacaagtt
ctagaacccatgttaaatgggactgagaagacacccccactaatcgtagactataaagaa
tatcacacagacacgacagtgaagtttatagtgaagatgactgaggaaaaactagctgaa
gcagaagcagtggggctacacaaggtcttcaaactccaaacaaatctaacatgcaactcc
atggttcttttcgaccacgtcggctttctcaagaagtacgactctccccaggatattctt
aaagagttctttgaactcaggctccgatattacaatttgagaaaagaatggctgattgga
atgctaggtgccgagtctgcaaaactgagcaaccaggctcgtttcatcctggagaaaata
gatggcaaaattgtgatcgaaaacaaacccaagaaggagctgattaaagttcttatccag
agaggctacgaatccgatccagtgaaggcttggaaggaatcgcaaaacaaggaagaagaa
gaagaggaggaggagggagaggacagtgagaaagaatcagctgcagctactggaccagac
ttcaactacctgctgaacatgcccctttggtatctgactaaggagaagaaagatgagctc
tgcaagcagagggataacaaagaaaaggagctggaaaaccttaagcgcaagagtccctcc
gatctgtggaaggaagaccttgctgcctttgttgaggaactcgatgcagtggaagccaag
caagctcaggatgagatggcaggggttgttggtaaacctttaaagatgaaaggagggaaa
atgaaggtgaagaaggcgcaactgccagaagtaatgccatcacctcatggcataagggtt
gttcctcggataactgcagagatgaaggcagaggcagagaagagaactaaaaagaagata
aagactgaaagaaatgaatttgatgagaatcaagaagaaaacacaccaggagacaaagag
ccttcaggccttaagcagagattagtgcagaagcttaatactgagcgaggtgcaaagaga
caggccactctaccatttaagccactaaagaaaatgaagaagcgaaacccttggtctgac
tcaggatctgattccgagtctgattttgaagcaccacctcaaagagagagactggttcgc
caagcagcagccaaagtcaagaccataatcagttcggactcagaagaagcatatctctcc
ggttcagatgaggggtctgaatttctgggtgacagtgaaggcaacaatgaatcggataca
agcacaaaacagaaacctgctcccaaacccaaagctgctccaaaggaaaccactgagaaa
gcagctaaagcttccaagcaaaagccagcacaaagcgctatccctgttcaagtccacgat
gttactgatgaagacgtgaatcaagctcctgcagctccttctgtccctgtgcctcgcagt
aatactgtggctaaaaaacccgctgcagctaagaagaccagtgccacaaaggataaccag
ccgtccatcatggatattctagccaagaaaaaggctccacccaaagccagcaagacagcg
acgaaggaggcatccctggatccggaggctggagcagccggtagcaagaagccagcccag
accaaggggcgcaaagttaccaaaaggcagcccagctctttggattcagattcggatttt
ggctcaaagccttccaaatccgttgcggcaaagaaatccaagccattagacgacgacagc
ttcactgttgattcaaccgctcgtgcagacagccccgtagcagctgagccccgtgctagg
cctggacgtaccaaaaagcccgtccagtacttggagtcgtctgatgaggatgacatgttt
tga
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integrated database retrieval system
