Cuculus canorus (common cuckoo): 104054453
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Entry
104054453 CDS
T08597
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X1
Organism
cuca
Cuculus canorus (common cuckoo)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT_assoc
BRCT
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
BRCT_2
zf-RING_UBOX
zf-RING_2
BRCT_3
RING_XB3-XBAT31
zf-RING_6
zf-C3HC4_3
zf-Nse
zf-RING_5
zf-RING_10
zf-MIZ
TRAF3_RING
zf-ANAPC11
Zf_2nd_IFT121
Motif
Other DBs
NCBI-GeneID:
104054453
NCBI-ProteinID:
XP_053944575
LinkDB
All DBs
Position
25:complement(4322614..4347278)
Genome browser
AA seq
1858 aa
AA seq
DB search
MDFSMIAVGDVQNVLSAMQKNLECPICLDVIQEPVSTKCDHIFCRFCMFKLLSKKNKGVV
ECPLCKTEVTKRSLKENSRFKQLIEGLLETIRAFELDTGVKFLSGHRFPKTPREAPAAES
LCEQSSVIQSKGFRKRKKSAKENGQENCTLEANVDTELIDTRVKRCPVGNKARKRDSEKG
VYIELGSDSSEEPFKRGSDTGLEDKEVLQILSQEKLQEVKSAEKETEYSSNAQPDELGAK
DIILILPNVTGESDLSKEGTRSITEYAKPSEANVTECQSSPLNLPAVDILTEQCDRMGDA
SPLRDGDSSFFRNTEEMDVEQVQCNSKSKELGLKDSSESRLDESKEIDIKQSVEAVEMYD
SKNNSFHEEEPPLEKVLQPDTPHDSTLNQVSRKRLKRSIQKVNEWFSKSNEILSSKSSQD
DSSGETDVSGEGDTCLSDKDSSISEKTDPMVGSMEIAVVEGNKRLSKQTADSIKDRIFGK
TYKRERRSNPPIILRDILPATKKEDVTAAEECLNNSSKDGRKRKRKSACVLQPEDFIKRT
DTEEADGCPLGVSVNERLGEAEKKRYDESSAVDQSHLSENREDNTLGELQEGGGSVQEKA
TEKVTGKLYDGEFELNNCDQKSTKKRNSASKKCRHPTRTMCALQLVVDRNTVSPDPTEPQ
IDSYPSSEEARKADSEQRQVRRSRRLQLLTEEMKKESGKGVVTKGARESDSDYEGSVFGV
QRNVLVHTSECKDLCEPQDTLSCKPLAGLEGGDLEENEIQVKLKNLSDAAETAKCLFSPT
SSHQYSNCSASPDAGSQEGEIQGRPSLLQSLSMTVVQPVSQQTEEPTESGTAFPQDNGHD
TQNIPEDCGMEKLPMAKKVSELTKEAEDSELDTQYLRNIFRHSKRLSFSLYPPMRACAVE
TAAAETVKMPRADQVENEHSKYLSPENLQEEKTAENLSKVCEKEKLETCESACASPVTSS
VSNAEFMRVEEHQDDVSQAGNQGNPMPIKMGTARAEDKNKLQKGERGNEMTMSADTGMER
ELKQNPVKSKRNQSDQSDTEKSIFKRSSLSTVDSICSCSESNQARKAETVDSKGHFQSRS
MICPATGQQRPAEFNHEITGKKGSKRQRKQVKGSEEPATQAAGSGVPECSVSEAQEDPLK
GNSDLTGSSETPDGLLCCDDTGENTSFSDTDKRERSAVFVKSSGNALVKELQNRNVSSVP
TSQSIQRPRRKAQKLQSSDEESSDDEELPCFQALIFGKSVSTPLQINEQVASVLESSVSP
VTLPRNRSPGDNDLQKLPAAALSNGCDSPSQESECSVNLFSSQSNVSEGSADGAQEPKKP
SIQDHTSKEVSNMNESKETFQSCNGTLKRTKTNFKDECQEDPNVGANLGEASGYDSETSY
VEDSYEPFSQSEILTTQQKNVMQNNLKKLQQEMAVLEAVLKQHGSEDCELLPLHKKLPHS
SSEGTLQMEHMRQERGGESASQGNSGNHKCSSSMGFSANEFHAMPSDSVNSKTKELERER
SSELSLRSSKSSFLKRPDLEKGLQHDNTLKNKAPAEKTKPAREAVQEYSQHCLEAGNTDE
QKSGSRPNSTSVLSNLSGNVTRSPNNSSSSARLFNPRAAEATDSSVVAQNADKSCAQERK
SKRSVRFPVSALHNAAGKENATSPVVTDRKEMSIVASGLNQSEHLMVQNFARKTQSTLTN
HMTEGTTHVIMKTDKELVCERTLKYFLGIAGRKWVVSYQWVIQSFKEGRVLDEEDFEVRG
DVVNGRNHQGPKRARQCLTGKIFKDFEICCYGPFTDMTTEHLERMVDLCGASVVKQLHLF
THTTNSTAVVVVQPDAWTEDMDYTALQQKNNVAIVTREWVLDSVALFECQEFDAYLVS
NT seq
5577 nt
NT seq
+upstream
nt +downstream
nt
atggacttctcaatgattgctgttggagatgtgcaaaatgtgctttcagctatgcagaag
aacttggaatgcccaatatgcttggatgtgatacaagagccagtttcaacaaaatgtgat
cacatattctgcaggttctgcatgttcaaactcctcagcaaaaagaataaaggtgtggta
gagtgtcctctgtgcaagactgaagtcaccaaaagaagtctgaaagaaaattccagattt
aaacaactaattgagggattattggaaactatccgtgcatttgagcttgacactggagtg
aagtttttaagtggtcatcgcttccctaaaacacccagagaagcccctgctgctgagtcc
ctgtgtgagcaaagttctgtcatccagagtaagggcttcagaaagaggaaaaaaagtgcg
aaagaaaatggccaagaaaactgcaccttggaagctaatgtggatacagagcttatagac
accagagtcaaaaggtgtcccgtaggaaacaaagcccggaagcgtgactcagaaaaaggg
gtttatatagagcttggatctgattcatcagaagagccttttaaaaggggaagcgatact
gggttagaagacaaagaagtacttcagattttgtctcaagaaaagctacaagaagtaaag
agtgctgagaaggagactgagtattcttccaatgcacagcctgacgagctgggtgctaaa
gacataattctaattctaccaaatgtcacaggtgaaagtgatttgtcaaaggaaggcact
cggagcatcactgaatatgccaaacctagcgaagcgaatgtgactgaatgtcaaagttct
cctttaaatcttcctgctgtagacatactcacggaacagtgtgacagaatgggtgatgcc
agtcccttaagggatggggactcatctttctttaggaacacagaagaaatggatgtggag
caagttcagtgcaatagtaaaagcaaagagcttggcttaaaagatagctcagagagcagg
ttggatgaaagcaaagaaatagatattaaacaaagtgtggaagctgtggaaatgtatgac
tccaagaacaattctttccatgaagaagaacctcctctggagaaagtacttcagccagac
acaccacacgatagtaccctgaatcaagtctctaggaagagactgaagcgaagcattcag
aaagtcaacgaatggttttcaaaaagcaatgagattctgtcttccaagtcttcgcaggac
gattctagtggagaaactgatgtttcgggtgaaggagatacatgtttatcagataaggat
tcttctatttcagaaaagactgaccctatggtaggttccatggaaattgcagtggttgaa
ggaaacaagagattgtcgaaacaaacagcagatagcattaaagaccgaatatttgggaaa
acatacaagagagagaggagatcaaatccccctattatcttgagagacattttacctgcc
acaaaaaaggaagatgtgactgctgctgaggagtgcttgaataattccagcaaagatgga
cggaaacggaaaaggaagagtgcctgtgtcctgcagcctgaggatttcatcaagagaaca
gatacagaagaggcagacgggtgccctctgggtgttagtgttaacgagcgccttggagag
gctgaaaagaaaagatatgatgaaagttctgctgttgatcagagtcacctctctgagaac
agagaagataatacattaggagaacttcaggaaggaggaggatccgtacaggaaaaagct
actgaaaaggtgactggcaagctctatgacggggaatttgaactgaataattgtgatcag
aaaagcactaaaaagagaaattctgcatcaaaaaaatgtaggcatcctactagaaccatg
tgtgctctacagttagtagtggatagaaacactgtttctcctgatccaactgagccacag
attgacagctatccaagcagcgaagaagcaaggaaagctgattctgagcaaagacaagtc
aggcgcagcaggaggcttcagttacttactgaagaaatgaaaaaagagtcaggaaaagga
gtagtaactaagggagcaagagagtctgacagtgactatgaagggtctgtctttggagtc
caaaggaatgtgttagttcacacttccgaatgcaaggacctgtgtgagccccaggataca
ttaagttgcaaaccacttgctggcctggagggtggcgatcttgaagaaaatgaaatacag
gttaaactaaagaatttatctgatgctgcggaaactgcaaaatgcctcttcagtcctaca
tcttcccatcagtattcaaattgttccgcttcacctgatgcaggttctcaagaaggcgaa
atacaaggtcgcccttccctcctgcagtctctttcaatgactgttgtgcagcctgtttcc
cagcagactgaagagcccactgaatcgggtactgcttttccccaggataatggacatgat
acacaaaatattccagaggactgcggaatggagaagctgccaatggctaaaaaggtttca
gaattgaccaaggaagctgaagacagtgagttagacacacagtatctgcgaaatatattt
aggcattcaaaacgcctgtcatttagcctttatcctcccatgagggcatgtgcagtagag
actgctgctgctgaaactgtaaagatgccacgtgctgatcaggtggaaaatgaacatagc
aaatatttaagcccagaaaacttgcaggaagagaaaaccgctgaaaacttgagtaaggtt
tgtgagaaagaaaagctcgagacctgtgaatctgcttgtgctagtcctgtgacttcgtct
gtcagcaacgctgaatttatgcgcgtggaggaacatcaagatgatgtttcacaggctgga
aatcaagggaatccgatgccaataaaaatgggtactgctagggctgaagacaaaaacaaa
ttgcaaaagggagagcggggaaatgaaatgacaatgtcagctgacacagggatggaaagg
gaattgaaacagaatccagtcaaaagtaaaagaaatcaaagtgatcagagtgatacagaa
aagagcattttcaaaagaagcagtttaagcacagttgattcaatatgctcctgttcagaa
agcaatcaagccagaaaggctgaaactgttgacagcaaaggacattttcagtcaagatcc
atgatctgtcctgcaactggtcagcaaaggcctgctgaattcaaccatgaaatcactggg
aaaaaaggtagcaaaagacaaagaaaacaagtgaagggcagtgaagaaccagcaacccaa
gctgctggctcaggagtgccagagtgttcggtttcagaagctcaagaagatcctcttaaa
ggcaacagtgatcttacaggttcatctgaaacacctgatggcttactgtgctgtgatgat
actggagagaacaccagcttttccgacaccgataagagagagagatctgctgtgtttgta
aaaagtagtggcaatgccctggtaaaagaactacagaatagaaatgttagttctgtgcca
acatcacaaagtattcaaagacctcgaagaaaagcgcagaaactgcaatcttcagatgaa
gagtctagtgacgatgaagaattgccatgctttcaggcattaatatttggcaaatcggta
agcacacctttgcagatcaatgaacaagtggcatctgtgctggagtcttcagtgagcccc
gtgacgttgcctcgcaacaggagtcctggtgacaatgatctgcagaagctgcctgcagct
gccctaagcaatgggtgtgactcaccgagtcaggagtcagagtgctctgtcaacttattt
tcttcccagtccaatgtgtctgaaggatcagctgatggagcacaagagccgaagaaacct
tccatccaagatcatacatccaaagaagtgagcaacatgaatgagagtaaagaaactttt
caaagttgtaatggaacgctgaaaagaaccaaaaccaacttcaaagatgaatgccaagaa
gacccaaatgtgggagcaaacctaggtgaagcatctggctatgacagtgaaacaagttat
gtagaagattcatatgaaccattttctcagagtgaaatccttactacacagcagaagaat
gttatgcaaaataacctaaagaaacttcagcaagaaatggctgtacttgaagcagtgcta
aagcagcatggaagtgaggactgtgaacttttacctctccataagaaactgccacattcc
agtagtgaaggaacgcttcaaatggaacacatgagacaagaaagaggaggggagtcagcc
tcccaaggaaattctggaaatcataaatgcagcagttcaatgggattttcggccaatgag
ttccatgctatgccaagtgattctgtcaacagtaaaaccaaagagttagaaagagaaagg
tcttcagaattgtcacttcgctcttctaaatccagttttttaaagagaccagatttggag
aaaggccttcagcatgacaacactctgaagaacaaagctcctgctgaaaagacaaaaccc
gcgcgggaagcagtgcaggaatatagtcagcattgccttgaagcaggaaacacagatgag
cagaaatctggaagcaggccaaacagtacatctgtcttatcaaatctctctggaaatgtg
accaggagtccaaataactcttcctcctcggcaagactttttaaccctcgagcagcagaa
gcaacagatagttctgttgtagctcagaatgctgataaaagctgcgctcaagagcgtaaa
tcgaagagaagtgtgcgttttcctgtatctgctctgcacaatgcagctgggaaagaaaat
gctacaagtccagttgtgactgacaggaaggaaatgtcgattgtggcatcaggtctgaat
caaagtgaacatttgatggtccagaattttgcaagaaaaacccagagcactttaacaaat
cacatgactgaaggaacaacccacgtcatcatgaaaacagataaagagctggtgtgtgaa
cggacactgaaatactttctgggtattgcaggaagaaaatgggtagtcagttatcagtgg
gtgattcagtctttcaaagaaggaagggtactggatgaggaggacttcgaagttagagga
gatgtagtcaatggcagaaaccaccaaggccctaagagggctcgacagtgtctgactgga
aagatctttaaagactttgagatctgttgctatggtcctttcactgatatgactacagaa
catctagaaaggatggtggacctttgtggtgcctcagtggtgaagcaacttcatctgttc
acacacacaacgaattctactgctgtcgtggttgtgcagccagatgcttggacagaagac
atggattatacagcactccagcaaaagaacaacgttgccatagtgactcgggagtgggta
ttggacagtgtcgctctcttcgagtgccaggagtttgacgcttaccttgtgtcctaa
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integrated database retrieval system
