Cuculus canorus (common cuckoo): 104054543
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Entry
104054543 CDS
T08597
Symbol
ABCB11
Name
(RefSeq) bile salt export pump isoform X2
KO
K05664
ATP-binding cassette, subfamily B (MDR/TAP), member 11
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104054543 (ABCB11)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cuca02000
]
104054543 (ABCB11)
04147 Exosome [BR:
cuca04147
]
104054543 (ABCB11)
Transporters [BR:
cuca02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB11 subgroup
104054543 (ABCB11)
Exosome [BR:
cuca04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104054543 (ABCB11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA_22
Zeta_toxin
ABC_ATPase
AAA_15
AAA_29
AAA_21
Rad17
Motif
Other DBs
NCBI-GeneID:
104054543
NCBI-ProteinID:
XP_009553858
LinkDB
All DBs
Position
6:complement(21392296..21441503)
Genome browser
AA seq
1351 aa
AA seq
DB search
MADPVVLRSIKKLGNDNYVFDLDGKGNGFKKSENFYTYEETSIEKKSEKSSEKKGNNVRV
GFFQLFRFSSSMEIFMMAVGSFCAIVHGAAQPAVLLVFGAMADTFIEYDIEMQELKDPGK
ICVNNTIVWINGSIHQNEKNATIKCGLLDIEQEMTRFAGYYAGIGCAVLVLGYLQIYLWV
MAAARQIQKIRKAYFRKVMRMDIGWFDCTSVGELNTRISDDVNKINEAIADQVAIFIQRL
TTFVCGFLLGFVSGWKLTLVIIAVSPLLGVGAAVYGLAVAKLTGRELKAYAKAGAVADEV
LSSIRTVAAFGGERKEVERYDKNLVFAQHWGIRKGIIMGLFTGYMWLIIFLCYALAFWYG
SKLVLEEEEYSPGTLLQVFFGVLVGALNLGQASPCLEAFATGRGAAANIFETIDKEPVID
CMSEDGYKLDKIQGQIEFHNVTFHYPSRPDIKILDNLNMVVKAGETTAFVGASGAGKSTT
IQLIQRFYDPTDGMITLDGHDIRSLNIQWLRSQIGIVEQEPVLFATTIAENIRYGRDEAT
MEDIIKAAKQANAYNFIMDLPQQFDTHVGEGGSQMSGGQKQRIAIARALVRNPKILLLDM
ATSALDNESEATVQEALHKARLGRTAISIAHRLSAIKAADVIIGFEHGRAVERGTHEELL
KRKGVYFMLVTLQSKGDTALNREGTETENDVVEPNLEKVQSFSRGSYRASLQASLRQRSR
SQLSNVVPDPPLSIAKDNAESMYLMSSCGEDDGQEKEESVVVKEDVKPVSFTRILKYNAS
EWPYMVLGSLAAAVNGAVNPLYALLFSQILGTFSILDEEEQRIQINGVCLLFVFIGILSF
FTQFLQAYTFAKSGELLTRRLRKIGFQAMLGQDIGWFDDRKNSPGALTTRLATDASQVQG
ATGSQIGMIVNSFTNIGVALIIAFYFSWKLSLVILCFLPFLALSGAVQAKMLTGFASQDK
KALEATGRISSEALSNIRTVAGIGKEETFIKNFEKHLAMPYRAAVKKAHVYGFCFGFAQS
VVFIANAVSYRYGGFLVDTEGLHYSFVFRVISAIVTSGTALGRASSYTPNYAKAKTSAAH
LFQLVDRLPKISVYSEKGDKWDDFKGNIEFLNCKFTYPSRPDIQVLKGLSVAVKPGQTLA
FVGSSGCGKSTSVQLLERFYDPEKGSVLIDGHDTKKINVQFLRSKIGIVSQEPVLFDCSI
ADNIKYGSETKEATMEKVIEAAQKAQLHDFVMSLPEKYETNVGAQGSQLSRGQKQRIAIA
RAIIRDPKILLLDEATSALDTESEKTVQAALDKAREGRTCIVIAHRLSTIQNADIIAVMS
QGVIIERGTHDELMAMEGAYYKLVTTGAPIS
NT seq
4056 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccctgttgttctgcgtagcatcaagaagctggggaacgataactatgttttt
gacttggatggcaaaggcaacggcttcaagaaatcagagaacttctatacgtatgaagaa
acttctatagagaagaaaagtgaaaagtcatcagaaaagaaaggaaacaatgttcgtgtt
ggcttctttcagctgtttcgattttcttcatctatggaaattttcatgatggctgttggt
agtttctgtgctattgttcatggagcagcccagccagctgttttgcttgtgtttggtgca
atggcagacacatttattgaatatgacattgaaatgcaagagcttaaagacccaggcaag
atatgtgtaaataacaccatagtgtggattaatggtagtatccaccagaatgaaaagaat
gccacaataaaatgtgggctgctggacattgaacaagaaatgaccaggtttgcaggttac
tatgcaggaattggttgtgccgtacttgtgttaggatacctccaaatctacctttgggtt
atggctgcagctcgtcagattcagaaaatcaggaaagcttatttcaggaaagtaatgcga
atggatataggctggtttgactgtacatctgtgggagaactgaacaccagaatttctgat
gatgttaacaaaattaatgaggctattgctgaccaggtagcaatctttatccagcgctta
accacctttgtgtgtggattcctactgggatttgtcagtggctggaaattgaccttggtt
attattgcagtcagccctctgcttggggttggagcagcagtctatggcttggctgtagca
aaactaacgggacgagaattaaaggcttatgcaaaagctggagctgtggctgatgaagtg
ctctcatccatcagaacagtggctgcttttggtggggagaggaaagaagttgaaagatac
gataagaatctggtgtttgctcagcactggggaattcggaaaggaataataatgggatta
ttcactggttacatgtggcttataattttcctgtgttatgcattagccttttggtatggc
tctaaactcgtccttgaagaagaggagtattctcctggcactcttctccaggttttcttc
ggtgttttagtaggagctttaaatcttggccaggcatctccatgtctggaagcctttgcc
accggacgtggggctgcagcaaatatttttgagacaatagataaggaacctgtcattgac
tgcatgtcagaagatggctacaagctggataaaatacaaggtcaaattgaatttcataat
gttacattccattatccctccagaccagatataaagattttggataaccttaatatggtt
gttaaagcaggggagacgacagcttttgttggagctagtggagctggaaaaagtacaaca
atacagctcatccagcgtttctatgaccccactgatggcatgattacgctggatggccat
gacattcgttcccttaatatccagtggctacgctcacagattggcattgttgaacaagag
ccagtgctatttgccaccacgattgcagagaacattcgctatggtcgggatgaggctacc
atggaagacataatcaaagcagccaaacaggccaatgcttacaatttcatcatggacttg
ccgcagcaatttgacactcatgttggagagggtggaagccaaatgagtggaggtcagaaa
cagaggatagctattgctcgagctcttgtgcgaaatccgaaaatcttgctactggacatg
gctacgtcagcacttgataatgaaagtgaagctactgtccaagaagcacttcataaggct
cgccttggccgcacagcaatctcgatagctcaccgcctgtcagccatcaaagctgctgat
gtcatcattgggtttgagcatggaagagctgtggagagaggaactcatgaggagctcttg
aagaggaaaggcgtttacttcatgttggtgaccttgcaaagcaaaggagacacagctctt
aacagagaaggaacagaaacagagaatgacgtggttgagccaaatcttgagaaagtccag
tcattcagcagaggaagctatcgggccagtttgcaagcttcacttcggcagcgctccaga
tctcagctttctaatgtggttcctgatcctccattatccattgcaaaagataatgcagag
tctatgtatcttatgtcttcttgtggagaagatgatggacaagaaaaagaggaatctgtt
gttgtgaaggaagatgtcaagcctgtttcatttaccagaattttgaaatacaatgcctct
gaatggccttacatggtgcttggatctctggcagcagctgtgaacggagcagtcaatcca
ctctatgccttgttattcagtcaaatccttgggaccttctctattcttgatgaagaagaa
caaagaattcaaatcaacggtgtctgtctgctttttgtctttattggaattctttcattc
ttcacacagtttctacaggcatacacctttgccaagtctggtgagctgcttacaagacgg
ttaagaaaaattggtttccaggctatgctagggcaagacattggttggtttgatgaccgg
aagaacagtcctggtgctttgactacaagacttgcaacagatgcctcacaggtccaaggg
gctactggatcacagataggaatgattgtcaattcctttaccaacattggggtggccctg
atcattgctttctacttcagctggaaactgagtttagttatactgtgtttcctgccattt
ttggccttgtctggagctgtgcaggctaaaatgctgacaggattcgcctctcaggacaag
aaagcgctggaagctactggacggatttccagcgaagccctctctaacatcaggactgtg
gctgggatagggaaagaggaaacgtttatcaagaattttgagaagcacctggctatgccc
tatagagctgcagtcaaaaaagcacatgtttatgggttctgctttggctttgcccagagt
gtagtgttcattgccaacgccgtctcctacagatatggagggttcctagttgacactgaa
ggcctccattacagttttgtgttcagggtgatctctgctatcgtgaccagtggaactgct
ttgggaagagcttcttcctacaccccaaactatgccaaagccaaaacatctgctgcacac
ctttttcaactggttgatcgccttcctaaaatcagtgtttacagcgaaaaaggggacaaa
tgggatgatttcaagggaaacattgaatttcttaactgtaaattcacatatccttctcgg
cctgatattcaggtcctgaaaggactctctgtagctgttaagcccggacagactttggca
tttgttggaagtagtggttgtggtaagagcaccagtgtccagcttctggagcgtttctat
gaccccgagaaaggcagtgtgttaatagatggacacgacaccaagaaaattaatgtacag
tttcttagatcaaaaattggaatagtgtcccaggaacctgtgctatttgactgcagcatt
gctgataacattaaatatggcagtgaaaccaaagaggcaacaatggaaaaagtcatagaa
gcggcccagaaggcccagctccatgattttgtcatgtcactgcctgagaaatatgagact
aatgtaggggctcaaggatcccagctgtctcgtgggcaaaaacaacgcattgctatagca
agggccatcatacgagatcctaagattttattactggatgaagcgacatctgccttagac
acagagagtgaaaagactgtgcaggcagcactggataaggccagagaagggcgtacttgc
atcgtcattgctcaccgcttgtccacgatccagaatgctgacatcatcgctgtaatgtca
caaggagtcatcattgaaaggggtactcacgatgaactgatggccatggaaggagcttat
tataagcttgtaaccactggagccccaattagctga
DBGET
integrated database retrieval system
