Cuculus canorus (common cuckoo): 104054592
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Entry
104054592 CDS
T08597
Symbol
CWC22
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
KO
K13100
pre-mRNA-splicing factor CWC22
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cuca03041
]
104054592 (CWC22)
Spliceosome [BR:
cuca03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
104054592 (CWC22)
Complex C
U4/U6.U5 tri-SnRNP related factors
104054592 (CWC22)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MA3
MIF4G
Motif
Other DBs
NCBI-GeneID:
104054592
NCBI-ProteinID:
XP_053925963
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Position
6:complement(25907996..25941577)
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AA seq
903 aa
AA seq
DB search
MKSSVTQVNHGSSYERKENYSSHQRSLSPEDRDIERDRSPSPRKRRYSDDNRYDQEYSRR
EYYDDRTSEGRRMERGRERYHEKWEERESDRRKQRRYSSPDGRTPERSSGQSSLAHDETT
SKKKKEEVDPILTRTGGAYIPPAKLRMMQEQITDKNSLAYQRMSWEALKKSINGLVNKVN
VSNIENIIHELLQENIVRGRGLLSRSILQAQSASPIFTHVYAALVAIINSKFPNIGELIL
KRLILNFRKGYRRNDKQLCLTSSKFVAHLMNQNVAHEVLCLEMLTLLLERPTDDSIEVAI
GFIKESGLKLTEVSPRGINAIFDRLRHILHESKIDMRVQYMIEVMFAVRKDGFKDHPIIP
EGLDLVEEEDQFTHMLPLEDDYNPEDVLNVFKMDPNFMENEEKYKMLKKEILDEGDSESE
ADQEAGSSEEDEDDDDEEEEGEDGQKVTVHDKTEINLVSFRRTIYLAIQSSLDFEECAHK
LLKMDFPESQTKELCNMILDCCAQQRTYEKFFGLLAGRFCMLKKEYMESFEAIFKEQYDT
IHRLETNKLRNVAKMFAHLLYTDSIPWSVLECIILSEETTTSSSRIFVKIFFQELSEYMG
LPNLNARLKDETLQPFFEGLLPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNAPKMIM
TQKQDVESSDSSSSSDTDSSSDSESDSSSSSSKSSSSSDSSSSSDNSSDSDVPKAKRKRM
QKKNRDSDKVSRKKQERKRKSLEKKSGRRQQEERSDTESKSERNHRNVRESHRRDDVSKY
HHRDESNGRDTYHRKDRNYERSKDPENKHSNSKPKNSEKRASLSDDEHYRHWSKDNDHCS
RRRERSKSRERAHNYSSPREEEEDRYRNGSEKHREKYSHYSDQYRESRKNEDRRRENSPH
RRK
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcagcgtgacacaagtaaaccatggttccagttatgaaaggaaggaaaactac
agttcgcatcaaagaagtttgtctccagaggacagggatatcgagcgtgacaggtctcca
tctcccagaaagagaaggtactctgatgacaacaggtatgatcaggaatattcaagaagg
gagtactatgatgacagaacttcagaaggacgaaggatggaaagggggagagaaagatac
catgagaaatgggaggagagagaatctgatcgaagaaagcagagaagatattcgtcacct
gatggtaggactccagagaggtcgtcaggccagagctcacttgctcatgatgagaccact
tcaaagaagaagaaagaagaagtggatccaatccttactcgcacaggtggtgcatatatt
ccacctgccaagctcaggatgatgcaagagcaaatcactgataaaaatagcttggcgtat
cagaggatgagttgggaagccttaaagaagtcaatcaatggtctcgtcaataaagtgaac
gtctctaatatagagaacatcattcatgagctccttcaggaaaacattgttcggggaagg
gggctgctgtctagatccattttgcaagctcagagtgcctctccaatctttacccatgtt
tatgcagctcttgtagcaattatcaattcaaaatttccaaatattggtgaattgattctc
aagagattgatactaaattttcgcaaaggatatcgcagaaatgataagcaactctgtcta
acatcttcaaaatttgttgcacacttgatgaatcagaatgtggctcatgaggttttatgt
ttggaaatgctcactttacttcttgaaaggcctactgatgacagtattgaagtagcaatt
ggatttattaaagagagtgggctcaaattaacagaagtttcccctagaggtattaatgca
atctttgaccgtcttcgacacattctgcatgaatctaaaattgatatgcgtgttcagtat
atgatagaagtcatgtttgccgtacggaaggatggcttcaaggatcatccaatcatccca
gagggattggatctagtggaagaagaggatcagtttactcatatgttgccattagaagat
gactacaatcctgaggatgttcttaatgttttcaagatggatccgaattttatggaaaat
gaagagaaatacaaaatgctgaaaaaagaaattcttgatgaaggtgacagtgaatctgaa
gcagatcaagaggctggaagtagtgaggaagacgaagatgatgatgatgaagaagaggaa
ggtgaagatggtcagaaagttactgtccatgacaaaacagaaattaacctggtttccttc
cgtcgtacaatttatctggctattcagtcaagcttagattttgaagaatgtgctcataaa
ttgctgaagatggactttcctgaaagtcagactaaagaactctgcaatatgatactagac
tgctgtgctcagcagaggacatatgagaaattctttggattactggcggggcgtttctgc
atgttaaaaaaagaatatatggaatcctttgaagctattttcaaagaacaatatgatact
attcatcgtttggaaacgaacaagctgaggaatgttgccaagatgtttgctcatcttctg
tacaccgattcaattccctggagtgttcttgaatgtataatactgagtgaagaaactacc
acatcctccagtagaatttttgtcaaaatattctttcaggaactcagtgaatatatggga
cttcctaatctaaatgcaagattaaaagatgaaacattgcagcctttctttgagggattg
ttgcctcgggataacccaagaaacactcgctttgccatcaatttcttcacttctattggc
cttggaggactaacggatgaattacgtgagcatcttaaaaatgcaccaaagatgataatg
acgcagaaacaagatgtcgagtcatcagattcctcttcatcttcagacacagactcttcc
tcagattctgaatctgacagcagcagtagtagctcaaagtcatccagcagcagtgattcc
tcatctagcagtgacaacagcagtgactcagatgttcctaaagccaaaagaaagagaatg
caaaagaaaaatagagactctgataaagtttccaggaaaaaacaagaaaggaaaaggaaa
tcccttgaaaagaaaagtggaagaaggcagcaagaagaaagaagtgatactgagagcaaa
tcggaaagaaatcaccgaaatgtgagggaatcacaccggagagatgatgtatcaaaatat
caccacagagatgagtccaatggcagagacacttatcatagaaaggataggaactatgaa
agaagtaaggatccagaaaataaacacagtaattcaaaaccgaagaattcagagaaaaga
gcttctttgtctgatgatgaacattacagacactggagcaaagataatgatcattgcagt
agaagaagagagagatcaaaatccagagagagagcccataattattcaagtccaagagag
gaggaagaagaccgatacagaaatggttcagagaaacatcgagagaagtacagccattac
tctgaccagtacagagaatccagaaagaatgaggacagacgaagagagaattccccacac
agacgaaaataa
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