Cuculus canorus (common cuckoo): 104054631
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Entry
104054631 CDS
T08597
Symbol
SORCS1
Name
(RefSeq) VPS10 domain-containing receptor SorCS1 isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cuca04131
]
104054631 (SORCS1)
Membrane trafficking [BR:
cuca04131
]
Protein recycling
Others
Others
104054631 (SORCS1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Toxin_18
Motif
Other DBs
NCBI-GeneID:
104054631
NCBI-ProteinID:
XP_053927850
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All DBs
Position
7:11223623..11595016
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AA seq
1271 aa
AA seq
DB search
MEKVAGWYPARHAALLYWTWLFLFTFGFTGAEITCRSCHSQVKPQQQQPQQGLLMHLRTD
RGEKEQRRSSGEKGGERGRRAEDAGLRATLASARTEFSARETRRWRREPGAEEPPRRWRR
EPGAEEPPRRWRREPGAEEPSRRWRTEPGAEEPPRRWRTEPGAEEPPRGSERRRRAAGRE
PGGSGAARFGLEELRLGSTTFALAGDSAHNQAMVHWSGHNSSVILILTKLYDYNLGSITE
SSLWRSTDYGTTYEKLNDKVGLKTILSYLYVCPTNKRKIMLLTDPEVESSLLISSDEGAT
YQKYRLNFYIHSLLFHPKQEDWILAYSQDQKLFSSVEFGRRWLLLHEGVAPNRFYWSMMG
SGREPDLVHLEAKTVDGHAQYITCKMQNCSEAARSKPFPGYIDHNSLIVQDDYVFVQLTS
GGRPHYYVSYRRNAFTPMKLPKYSLPKDMHVISTDENQVFAAVQEWNQNDTYNLYISDTR
GVYFTLALEDVKSSQGLEGNVMIDLYEVAGIKGMFLANKKIDNQVKTFITYNKGRDWNLL
QAPDTDLRGNPIRCLLPYCSLHLHLKVSENPYTSGNIASRDTAPSIIVASGNIGTELSDN
DISMFISSDAGNTWRQIFEEEHSVLYLDKGGVLVAMKHTSLPIRHLWLSFDEGRSWSKYS
FTSLPLFVDGVLGEPGEETLIMTVFGHFSHRSEWQLVKVDYKSIFDRRCAEEDYRPWQLH
RQGEACIMGAKRIYKKRKSEKKCMQGKYAGAMTSEPCACTEADFDCDYGYERHSNGQCLP
AFWYNPSSLSKDCSLGQSYLNSTGYRKVVSNNCTDGVGERYTAKPQQCPGKAPQGLRIVT
SDGKLTAEQGHNVTFLVQLEEGDLQKSLIQVDFGDGIAVSYANLSSTEDGIKHIYQNVGI
FRVTVLAENSLGSDSAVLYLHVTCPLEHVHLSLPFVTTKNKEVNATAVLWPSQVGTLTYI
WWFGNNTEPLITLEGSITFTFSVEGMNTITVQVSAGNIILQDAKTIAVYEQFQSLRLSFS
PNLDDYNPDIPEWRRDVSRVVKRALVEATGISNKHILVAVLPGLPTSAELFILPHQDATG
ENKRRAADLEQISETLIQKLNQNLVHFELKPGVQILVHAAHLTAAPLVDLTPSHSGSAML
MLLSVVFVGLAVFVIYKFKRKIPGLNIYAQMQNEKDQEMVSPVSQRESIPNVPQSELMSP
EQLVDEKLEVQPIEQPQATVQNPRKGNAAKVVWTEDFQKACGSPRGFKPRPEAEVFPQLL
SPRAQKKSLPM
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagttgctggctggtacccagcccggcacgccgctctcctgtactggacatgg
cttttcctcttcacttttggctttaccggtgcagaaataacttgcagatcctgccattcc
caggtgaagccgcagcagcagcagccgcagcagggattattaatgcatttgaggaccgac
agaggagaaaaggagcagaggaggtcctccggggagaagggaggtgagagagggcgacgg
gccgaggatgccgggctgcgagcgaccctcgcctccgcaaggacggaattcagcgctcgg
gagacgcggcggtggaggagggagcccggtgccgaggagcccccgcggcggtggaggagg
gagcccggtgccgaggagcccccgcggcggtggaggagggagcccggtgccgaggagccc
tcgcggcggtggaggacggagcccggtgccgaggagcccccgcggcggtggaggacggag
cccggtgccgaggagcccccgcggggctcggagcggcggcggcgcgcggcggggcgggag
ccggggggcagcggcgccgcccgcttcgggctggaggagctgcggctgggcagcaccacc
ttcgccctcgccggggactcggcgcacaaccaagccatggtgcactggtcggggcacaac
agcagcgtgattctaattctgacaaagctgtatgactacaacctgggaagcatcacagaa
agctctctttggaggtcaacagattatgggacaacgtatgagaaacttaatgataaagtg
ggcctgaagactattttgagctacttgtatgtttgtccaacaaacaaacgtaagattatg
ctgctgactgatccggaagttgagagcagcttattaatcagttctgatgaaggggctact
tatcaaaaatatcgtctgaacttctacatccacagtctgcttttccaccccaagcaggaa
gactggatcttagcatacagccaagatcaaaagctattcagttccgtggagtttggcaga
agatggctgcttcttcacgagggagttgcaccaaacaggttctactggtctatgatgggg
tccggcagagagcctgatctcgtgcacctagaggcaaagacagtggatggtcatgcccaa
tacatcacctgcaagatgcagaactgcagtgaagcagctcgcagcaaaccctttccaggc
tatattgaccataactccctgattgtccaggatgattacgtctttgttcagttgacgtca
ggaggaagaccacattattacgtttcatataggaggaatgcatttaccccgatgaagcta
ccaaagtactccttgcccaaggacatgcatgttatcagcacagatgagaatcaggtgttt
gcagctgttcaagagtggaaccagaatgacacgtacaatctgtatatctccgacacccga
ggggtttacttcaccctggccttggaagatgtcaaaagtagtcaagggctggaggggaac
gtgatgattgacctctatgaggtagcagggataaaggggatgttcttggccaacaagaag
attgacaaccaagtgaaaactttcatcacctacaataaagggagagactggaatttgttg
caggctccggacactgatctgagaggaaaccccattcgctgtctcctaccttattgctcc
cttcatcttcatctgaaggtctcggagaatccctatacctcaggaaacatcgccagccga
gacactgcccccagtattattgtagcttcaggtaatataggcactgaactatcagacaat
gacatcagcatgtttatttcttctgatgctgggaacacttggagacagatttttgaggaa
gaacacagtgttctgtacctggataaaggtggagtactggttgccatgaaacacacatct
ctgcctattagacatctctggttaagttttgacgaagggagatcttggagcaagtacagt
ttcacatctctcccactgtttgtagatggagttttaggggaaccaggagaggaaactcta
atcatgacagtgtttggacatttcagccaccgctcggagtggcagctggtgaaagtagac
tacaagtccatttttgatcggaggtgtgcagaagaggactataggccttggcaactccat
aggcagggagaagcttgcatcatgggagcaaagaggatctacaagaagcgcaaatcagag
aagaaatgcatgcaaggaaaatatgctggggccatgacctcggagccatgcgcgtgcaca
gaggcagactttgactgtgattatggatatgaacgtcacagcaatgggcagtgtttacca
gctttctggtataacccatcttccttgtcaaaggactgtagccttggacagagttatctc
aacagcactgggtaccggaaagttgtttctaacaactgcacggatggtgtgggagaacgg
tatacagcaaaaccccagcaatgtcctggcaaagccccacaaggccttcgcatagtcacg
tctgatggcaaactgacagccgagcaaggacacaatgtcactttcctggtccagttggag
gagggagacctccagaaatcccttattcaagtggattttggagacggcattgctgtgtcg
tatgccaatcttagctcaacagaagatgggatcaagcacatctaccagaatgtgggcata
tttcgggtgactgtgctggcggaaaatagcctgggttctgacagtgctgtcctctacctg
catgtaacatgccccttggaacatgttcacttatctctaccattcgtcaccacaaagaac
aaggaggtcaatgccacagcagtactgtggccaagccaagtgggaacacttacttacatc
tggtggtttggtaacaacacagagccactgatcacattggaaggaagcatcacattcaca
ttctctgtggaaggaatgaataccatcaccgttcaggtctcagcagggaacatcattctt
caggatgcaaagactattgctgtgtatgagcaatttcaatccctgcgtttatcattctct
ccaaacctggatgactacaatccagatatcccagaatggagaagggacgtcagtagagta
gtcaagagagccctggtggaggcaacaggcatttcaaacaagcacattctggtcgcagtg
ctccctggtctgcccacatctgccgaactcttcattttaccacatcaagatgccacagga
gaaaataaaagaagagcagcagacctagagcagatttcagaaacactgatccagaaactg
aaccaaaacctggtccattttgagttgaagcctggagttcaaatcctcgtccatgctgcc
catttaacagcagctcccctggtggatctcactcccagtcacagtggttcagctatgctg
atgctcctctctgtcgtttttgtgggactagccgtgtttgtaatctacaagttcaaaagg
aagattcctggccttaatatatatgcacagatgcagaatgaaaaagatcaagagatggtc
agtccagtcagtcagagggaaagcatacctaatgtccctcaaagtgagctgatgagccct
gagcaactagtagatgagaagttggaagtccagcccatagagcaaccccaggccacagtc
cagaacccaaggaaaggaaatgcagccaaggtagtctggacagaggacttccaaaaggct
tgtggatcaccaagaggtttcaagccaagacccgaagcggaagtatttccacagctgctg
agccccagagcacaaaagaaatcccttcctatgtaa
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