Cuculus canorus (common cuckoo): 104054707
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Entry
104054707 CDS
T08597
Symbol
SCARB1
Name
(RefSeq) scavenger receptor class B member 1 isoform X1
KO
K13885
scavenger receptor class B, member 1
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03272
Virion - Hepatitis viruses
cuca04145
Phagosome
cuca04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
104054707 (SCARB1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
104054707 (SCARB1)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
104054707 (SCARB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cuca04131
]
104054707 (SCARB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cuca04147
]
104054707 (SCARB1)
Membrane trafficking [BR:
cuca04131
]
Endocytosis
Phagocytosis
Scavenger receptors
104054707 (SCARB1)
Exosome [BR:
cuca04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104054707 (SCARB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CD36
Motif
Other DBs
NCBI-GeneID:
104054707
NCBI-ProteinID:
XP_009554054
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All DBs
Position
17:5253756..5274937
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AA seq
505 aa
AA seq
DB search
MAAARRGAVLGFGLAGVACALLGGCLLLVGPVIVKEQVVKNVRIDPSSISFNMWKDIPVP
FYMSVYFFEVLNPKEVLQGAKPALNQRGPYVYREFRYKTNITFNDNDTVSFLEYRQLFFR
PDLSNGSEDEYIVVPNILMMGAAVMMEDLPAFVKFLLSGALSGLRQEAFMNRTVREIMWG
YEDPLIDTINALVPGLIPFKGKFGLFVGLNNTNSGLFTVHTGMKDISRVHMVDSWNGLKK
VNYWRSSECNMINGTAGEMWPPFMSPTSLEFYSPDACRSMKLVYEQSGKFEGVPTYRFVA
PKTLFANGTDYPPNEGFCPCLQSGIQNVSSCRLNAPMFISHPHFYNADPVLVNAVEGLKP
NKEQHALFLDVHPMTGIPMNCSIKLQLNLYIKRVSGIIQTGKIKPVVLPLLWFAESGSIE
GSVLKQFYTNLVLIPSLLEYLQYVFLGLSVPLIISAAVIGAKSQEKCSLFWSSNKKNSES
NKAKQATSAKKLPPVKGMVLREARM
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggcgcggcggggggcggtgctggggtttgggctagcgggggtggcgtgcgcc
ctgctggggggctgcctgctgctcgtgggcccggtcatcgtcaaggagcaggtggtcaag
aatgtcagaattgatcctagcagcatctccttcaacatgtggaaagacatccctgttcct
ttctacatgtcggtgtacttctttgaagtgctgaaccccaaggaggtcctccagggagcg
aagccagcactgaaccagcgtggaccctatgtttacagagagttcaggtataaaacaaat
atcacgttcaatgacaatgacaccgtctccttcctggagtaccggcaactcttcttccgg
ccggacttgtccaatggcagtgaagatgagtacatcgttgtgccaaacattttgatgatg
ggagcagctgtaatgatggaagacctgccagcctttgtgaagtttttactgagtggagcc
ctgtctggcctgagacaagaggcattcatgaaccggacagtgagggagatcatgtggggg
tatgaagaccctcttatagacacaataaacgcgctcgttcctggcctcatccctttcaag
gggaaatttggcttatttgtggggcttaacaacaccaattcagggctgttcacagtgcac
acaggcatgaaggacatcagtagagttcacatggtggattcatggaacggactgaagaag
gtgaactactggcggagcagtgagtgcaacatgatcaatgggactgcaggggagatgtgg
ccaccgttcatgtccccaacatcactggagttctacagccctgacgcctgcagatccatg
aaactggtatacgagcagtctgggaagtttgagggtgtgcctacctatcgctttgtggca
ccgaaaactctctttgccaacggcacagactatccacctaacgaaggcttctgcccctgc
ctgcagtctggcatccagaacgtcagtagctgtaggctaaatgcaccgatgttcatttcc
catcctcacttctacaatgctgacccagtcctggtgaacgctgttgaaggcctgaagccc
aacaaggagcagcacgcgctcttcctcgatgtgcacccgatgacgggcattcccatgaat
tgttccatcaaactccagctgaatctctacataaagcgcgtgtctggtataatacaaaca
gggaaaattaagccagtggtcctgccactgctgtggtttgcagagagtggatccattgag
ggctcagtcctaaagcagttttacaccaacctggtgctgatcccgtccctgctggagtac
ctgcaatatgtttttcttggtctgagtgtcccactgattatctcagcagctgtaatcggg
gcaaagagtcaggagaaatgctctttattttggagtagcaataaaaagaactcagagagt
aataaagccaagcaggctacctctgccaaaaagctgcctccggttaaggggatggtgttg
cgggaagccagaatgtag
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