Cuculus canorus (common cuckoo): 104054743
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Entry
104054743 CDS
T08597
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104054743 (PRPF38B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cuca03041
]
104054743 (PRPF38B)
Spliceosome [BR:
cuca03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
104054743 (PRPF38B)
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Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
104054743
NCBI-ProteinID:
XP_009554093
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All DBs
Position
8:9468792..9478101
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AA seq
545 aa
AA seq
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MANNSPAGGNCQGQQVAQHPPGAGPPGQQQLQGAGPKPAASGKQGNVLPLWGNEKTMNLN
PMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRGV
GTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDWFE
SFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKTIDQQIKSRPRK
IKKDGKEGMEEIDRHVERRRSRSPRRSISPRRSPRRSRSRSHHREAHGSSSFDRELERER
ERQRLEREAKEREKERRRSRSTDRTLERRRSRSRDRYRSRSRSRDRKGDRRDRDREREKE
NERSRKKDRDYDKERGSERERDRSRERSKERKSKGDLEERRHKDDKDDKKHRDDKRDSKK
ERKHSRSRSRDRKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNKRSRSRSRGRTDS
VEKSRKRDQSPSKEKSRKRSRSKERSHKHDPSDSKDHSDKHDRRRSQSTERESQEKQQKN
KDETL
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaacagccctgcgggcgggaactgccaggggcagcaggtagcgcagcacccg
cccggcgccggcccgccggggcagcagcagctgcagggcgcggggcccaagccggccgcc
tcgggtaagcagggcaacgtgctgccgctctggggcaacgagaagaccatgaacctgaac
cccatgatcctcaccaacatcctctcgtcgccctacttcaaggtgcagctctacgagctc
aagacctaccacgaagtggtggacgagatctacttcaaggttacgcatgttgaaccatgg
gaaaaggggagcagaaaaacagcaggccagacagggatgtgtggaggggtgcgtggtgtt
ggaactggtggaattgtgtctactgccttttgtctgctctacaaattatttacgctgaaa
ctcactcgtaagcaagtgatgggccttataactcatacagactctccgtatattagggct
cttggatttatgtatattaggtacacacagccacctacagatctgtgggactggtttgaa
tcctttcttgatgatgaagaggacctggatgtgaaggcaggtgggggttgcgttatgacc
atcggggagatgcttcgttccttcctcactaagcttgaatggttttccacgttgtttcca
agaattcctgtgccagtccagaaaaccattgaccagcaaattaaaagcagacctagaaaa
atcaagaaagatggcaaggagggaatggaagaaatagaccggcatgtggaacgtagacgt
tcaaggtctccaagacgatccatcagtcccaggaggtctcccagaagatccagaagcaga
agtcatcatcgtgaagcccatggatcgtctagttttgatagagaactagaaagagaaaga
gaaaggcaaagattggagcgtgaagccaaggagagggaaaaagaaaggcggcgatctcga
agtacagatcgcacactagaacggaggcgaagcagaagcagggacagatacagaagccgt
agtcgaagtcgtgacaggaaaggagatagaagagacagggatagggagcgagagaaagaa
aatgaacggagccggaaaaaagatagagattatgataaggaaagaggtagtgagagggaa
agagatcgatctagagaaagatcaaaggagaggaaaagtaagggtgatctagaagagaga
agacacaaggatgataaggatgacaagaaacaccgggatgacaagagggattccaaaaaa
gagagaaaacatagtagaagtcgaagccgggatagaaagcatagaagtaggagccgaagt
aggaatgcaggtaagcgcagcagaagcaggagcaaagagaaatcaagtaaacataaaaat
gaaagtaaagagaagtcaaataaacgaagtagaagcagaagcagaggaagaacagatagt
gttgagaagtcccgaaagcgagaccagagtcccagcaaagaaaagtctagaaagcgtagc
agaagcaaagagcgttcccacaaacatgatcccagtgatagcaaggaccattcggacaaa
cacgatcgtcgaaggagccaaagtacagaacgagagagccaggaaaagcaacaaaaaaac
aaagatgagactctgtga
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