Cuculus canorus (common cuckoo): 104054821
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Entry
104054821 CDS
T08597
Name
(RefSeq) protocadherin beta-15-like
KO
K16494
protocadherin beta
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cuca04515
]
104054821
Cell adhesion molecules [BR:
cuca04515
]
Cadherins
Protocadherins
104054821
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
104054821
NCBI-ProteinID:
XP_053935969
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Position
14:1507218..1511985
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AA seq
811 aa
AA seq
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MAIARQVLCLSALLSLPHARSQPLRYSVAEEAPSGSLVADVAEDAGLSPAQLSARRARLA
SEDGRQRLRLDRATGRLVVAERLDREELCAQAPACTLPFELLLADPLQFLRIEVAVRDIN
DHSPRFPDEQVTLKILETINSPGSRFPVEGAQDLDIGINSVQGYSISPENEYFSVSFGSQ
SDEDKYVELVLVKALDREHKAEMDFSLIAVDGGSPPRSGTTQIHVVVLDVNDNAPIFTQK
LYVGQVLENAREGSVVLRVVATDLDAGTNGDISYHFSQEVGQSETAFAIDPKSGEIKLIR
ALDFEEAEKCELSVRATDGGGLSAICKVLVEIVDVNDNAPELVVSSFSSSLPENALPGTV
VAFFNVKDRDSGANGKISCALEDQLSFSLRPAYKNYYELVTMSTLDREETAQYILIVIAT
DAGSPPLTTTHTFKVEISDVNDNAPVFNQTSYTMYVCENNVPTVLVGVVHASDADIGPNA
KVTYSLAPDHHSEQPPSSPCVSVNSVNGHVFVLWPLDYEQLKKVEVLVIASDAGSPPLSA
NVTVHLVVVDENDNAPLVLHPAQDSSPASSELVPMSAEAGYLVTKVVAVDADSGQNSWLS
YHLLKATDPGLFVVGAQSGEVRLRRPVTERDAVKQKLVILVRDNGRPPLSATAALSALLL
NDFSDVRLPQSSLTMEVEDDPLTTYLIISLVFVSLLFLASMAAFIAFKVCKRKDLKDGHV
IYAANNLPSSLADAASAGTLPHPYCYEISLTTGSGNSEFEFLKPILPSLPPQRCAVAGIT
DNEQVFPHNPLTMEDVTPENAGMQFNSLSFT
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgcaaggcaagtgctttgtctctccgctctcctctcgctgccgcacgctcgc
tcccagcctctgcgctactccgtagccgaggaggcgccgagcggctcgctcgtagccgac
gtggccgaggacgcggggctgtccccggcgcagctctcggctcgccgcgcccgcctggcc
tcggaggacggccggcagcgcttgcgcttggaccgcgccaccggccgcctcgtcgtggcc
gagaggctcgaccgggaggagctgtgcgcccaggcgcccgcctgcacgctgcccttcgag
ctgctgctggccgacccgctgcagttcctgcgtatcgaggtggccgtgcgggacatcaac
gaccactcgccccgtttcccggacgagcaggtcacgcttaagatcctggaaactattaac
agtcccggctcgcgcttccctgtggaaggggctcaggacctggacattggcatcaacagc
gtccagggttatagcatctctcccgagaacgagtactttagtgtctcctttgggagtcag
agtgacgaagacaaatatgtggaactggtcctggtaaaggctctagacagggagcataag
gcagagatggatttcagcctcattgctgtggacgggggctctccaccgaggagtgggaca
acgcaaattcacgttgtcgttctagatgtaaatgacaatgctcccatcttcacccagaag
ctgtatgtcggtcaggttttggaaaacgcccgagagggctctgtcgttctgagggtggtg
gcaactgatctggacgcgggaactaatggggacatctcctatcacttcagccaagaggtg
ggccagagcgaaacagcatttgcgattgaccccaagagcggtgaaattaagctcattagg
gctctggacttcgaggaagctgagaaatgtgagctgagtgtgcgggcgacagacggtggg
ggactctcagcaatctgcaaggtgttggtggagattgtggatgtgaatgacaatgcacca
gagctggtggtgagctccttcagcagctccctccctgagaacgcattacctgggacggtg
gttgctttctttaatgttaaggatcgtgattctggtgctaatgggaagatctcctgtgcc
cttgaggaccagctgtcattttcccttcggccggcctataagaattactatgagctggtg
accatgagcacactggaccgggaggagacagcacagtacatcctgattgtcatagcaaca
gacgcagggtcacctcctctcaccactacacacaccttcaaggtggaaatctctgacgtc
aacgacaatgcacctgtcttcaaccagacatcatacaccatgtatgtgtgtgagaacaat
gtccccactgttcttgttggagttgtccatgcctcagatgctgacataggccccaatgcc
aaggtgacctattccctggcaccagatcaccattcagagcagcctcccagctctccctgt
gtctctgtgaactctgtgaatgggcacgtgtttgtgctgtggcctctggactatgagcaa
ctgaagaaggttgaggttctggtgatcgcctctgatgcaggatctcctcccctcagtgcc
aatgtcactgtccaccttgttgtggtggatgagaatgacaatgccccactggtgctgcac
ccagcccaggacagcagcccagcatccagcgagctggtgcccatgtcagctgaggcgggg
tacctggtcaccaaagtggtggctgttgatgctgattctgggcagaactcatggctttca
taccacttgctgaaggccactgaccccgggctgtttgtggtgggtgcccaaagtggagag
gtgcgtctgaggaggccagtgacagagagagatgcagtgaagcagaaacttgtcatcctg
gtgcgggacaacgggcggccaccactgtcagccacggcagcattgagtgcactcctgctg
aatgatttttcggatgtgcgcctgccacaaagtagcctgaccatggaggttgaggacgac
cccctgacaacctatttaatcatttccttggtctttgtctcactgctctttcttgcatcc
atggcggccttcattgctttcaaggtgtgcaagagaaaggatctgaaggatggccatgtg
atttatgctgccaacaacttgccgagcagtctggctgatgcagcctctgcagggactctg
ccccatccctattgctacgagatcagcctcacgacgggctctggcaacagcgagttcgag
ttcctgaagcccatcctgcccagcctgccaccacagcgctgtgctgtggctgggatcacc
gacaatgagcaggttttcccccataaccctctcaccatggaggatgtgacaccagagaat
gcagggatgcagttcaatagtctttcctttacatag
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