Cuculus canorus (common cuckoo): 104054826
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Entry
104054826 CDS
T08597
Symbol
HARS1
Name
(RefSeq) histidine--tRNA ligase, cytoplasmic isoform X1
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
104054826 (HARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cuca01007
]
104054826 (HARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cuca03016
]
104054826 (HARS1)
Enzymes [BR:
cuca01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
104054826 (HARS1)
Amino acid related enzymes [BR:
cuca01007
]
Aminoacyl-tRNA synthetase
Class II (A)
104054826 (HARS1)
Transfer RNA biogenesis [BR:
cuca03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
104054826 (HARS1)
Prokaryotic type
104054826 (HARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
HGTP_anticodon2
WHEP-TRS
tRNA-synt_2
FAM198
tRNA-synt_2d
Wbp11
Motif
Other DBs
NCBI-GeneID:
104054826
NCBI-ProteinID:
XP_009554181
LinkDB
All DBs
Position
14:complement(1105373..1119885)
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AA seq
501 aa
AA seq
DB search
MAAEAAVRAQAEAVRRAKQEKADPELITKEVAKLLEMKAQLGGDENKHKFVLKTPKGTRD
YSPKQMAIRERVFDTIITCFKRHGAEVIDTPVFELKETLTGKYGEDSKLIYDLKDQGGEL
LSLRYDLTVPFARYLAMNKITNIKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAGQFDP
MIPDAECLKIVHEILSNLQLGDFLIKVNDRRILDGMFAVCGVPDSKFRTICSSVDKLDKM
PWEEVRSEMVGEKALSPEAADHIGEYVQLHGGLDLAERLLQDPKLSQNKLAKEGLGDLKL
LFEYLALFGIAEKISFDLSLARGLDYYTGVIFEAVLLQPENDHMEEPVGVGSVAGGGRYD
GLVGMFDPKGRKVPCVGVSIGIERIFSILEQRVEASQEKIRTTETQVLVASAQKKLLEER
LKLVSELWDAGIKAEVLYKKNPKLLNQLQYCEDAGIPLVAIVGEQELKDGVVKLRDVATR
EEVNIRRESLVEEIRMRTSQP
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggaggcggccgtgcgggcgcaggcggaggcggtgcggagggccaagcaggag
aaggccgaccccgagctgatcacaaaggaggtggcgaagctgctggagatgaaggcacag
ctgggaggagatgagaacaaacacaagtttgtgctcaagaccccaaagggcacgcgggac
tacagccccaagcagatggccattcgcgagagagtctttgacaccatcatcacctgcttc
aagcgccacggagcagaagtcatcgatacaccggtgtttgagctaaaggagacgctgaca
gggaaatatggtgaagactcaaagctcatctatgatctgaaagaccaagggggagagctg
ctgtcgctgcgctacgacctgacagtgcccttcgctcgctatctggcaatgaataagatt
accaacatcaagcgctaccacattgccaaggtctacaggcgggacaacccggccatgacc
aggggccgctaccgagagttctaccagtgtgattttgacatcgcggggcagttcgaccca
atgattcccgacgctgagtgcctgaagatagtgcacgagatcctgagcaacctgcaactt
ggggactttctcattaaggtcaatgaccggcgcatcctcgatgggatgtttgcggtttgc
ggagtcccagacagcaagttccgaacaatctgctccagcgttgacaaactggataagatg
ccatgggaagaagtgcgtagtgagatggtaggggagaaggcgctctctcctgaggctgcg
gatcacattggggaatatgtccagcttcacggtgggctggacctggctgagcggcttctc
caagaccccaagctgtcccagaacaagctggccaaggaggggctgggggacctaaagctg
ctgtttgagtacttggcactgtttggcatcgcagagaagatctccttcgacctgagcctg
gcgcggggtctggactattacacgggggtgatctttgaggctgtgctgctgcagccggag
aacgaccacatggaggagcccgtgggcgttgggagcgtggctggaggtggccgctatgat
gggctggtgggaatgtttgatcccaagggccggaaggtgccttgcgtgggggtcagcatt
ggcattgagcggatcttctccatcctggagcagagagttgaggcctctcaggaaaagatc
aggacaacagagacacaggtgctggtggcctctgcccaaaagaagcttcttgaggagcgt
ctgaaactcgtctctgagctgtgggatgctggaatcaaggcagaggtgctgtacaagaag
aatcccaagctgctgaaccagctccagtactgcgaggacgcagggatccccctcgtcgcc
atcgtgggagagcaggagctcaaggacggagtcgtcaaactgcgggatgtggcaacccgg
gaggaggtcaacattcgcagggagagcctggtggaggagatcaggatgcgaacgagccag
ccttaa
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