Cuculus canorus (common cuckoo): 104054878
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Entry
104054878 CDS
T08597
Symbol
GPC6
Name
(RefSeq) glypican-6 isoform X1
KO
K08112
glypican 6
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cuca00535
]
104054878 (GPC6)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cuca00537
]
104054878 (GPC6)
Proteoglycans [BR:
cuca00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
104054878 (GPC6)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cuca00537
]
Others
104054878 (GPC6)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Glypican
PAF-AH_p_II
Motif
Other DBs
NCBI-GeneID:
104054878
NCBI-ProteinID:
XP_053926811
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Position
1:complement(53141983..53899306)
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AA seq
617 aa
AA seq
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MCACARPSPPRLAKVCLGDRGAPGPPPPQLWGAATAARRQRGGSAGPARLAMPGLLLLLL
LPPLLSLPPAAAAGGEGKARSCGEVRQAYSAKGFSLASVPYQEIAGEHLRICPQEYTCCT
SEMEDKLSQQSKLEFENLVEETSHFVRTTFVSRHKKFDEFFRELLENAERSLNDMFVRTY
GMLYMQNSEVFQDLFTELKRYYTGGNVNLEEMLNDFWARLLERMFQLINPQYHFTEDYLE
CVSKYTDQLKPFGDVPRKLKVQVTRAFIAARTFVQGLTVGREVANRVSKVSPTPGCIRAL
MKMLYCPYCRGLPTVKPCNNYCLNVMKGCLANQADLDTEWNLFIDAMLLVAERLEGPFNI
ESVMDPIDVKISEAIMNMQENSMQVSAKVFQGCGQPKPAPALRSSRSVPENFNTRFRPYN
PEERPTTAAGTSLDRLRTIWRTMQHGVTDIKEKLKLSKKFWSTLPYTICKDEQVTAGPSI
EEDCWNGHTKARYLPEIMNDGLTNQINNPEVDVDITRPDTFIRQQIMALRVMTNKLKNAY
NGNDVNFQDTSDETSGSGSGSGCTDDICPTEFDFVTTEAPSVDSDRREVEASATQPGWSL
QTLLIIFISFVLQRQWR
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcgtgtgcgcgcccatctcccccccgcctggcaaaagtttgcctcggcgaccgg
ggggctcccgggccgccccccccgcagctttggggcgcggcgacagcggcgcggcggcag
cgcggcggcagcgcgggacctgcgcgcctcgccatgccggggctgctgctgctgctgctg
ctgccgccgctgctgtcgctgccgcccgcggcggcggcggggggcgaaggcaaagcgcgg
agctgcggcgaggtgcggcaggcgtacagcgccaagggcttcagcctggccagcgtgccc
taccaggagatcgcaggggaacatttgagaatctgccctcaggaatatacatgttgtacc
tcagaaatggaggacaagttaagccaacagagcaaactggagtttgaaaacttggtggaa
gagacaagtcactttgtacgcaccacttttgtgtcccggcacaagaagtttgacgaattt
ttccgagagcttttggagaatgcagaaagatccttaaacgacatgtttgtccggacatat
ggtatgctgtacatgcaaaactcagaggtgttccaggacctcttcacggagctgaagcgg
tattacacaggaggcaacgtgaacttggaggaaatgctgaatgatttctgggctcggctg
ctggagcggatgttccagctcataaacccccagtaccatttcactgaggactacttggaa
tgtgtaagcaagtacacggatcagctgaagccatttggagatgtacccaggaagctgaag
gttcaagtgactagagcgttcattgctgcacggacctttgttcaggggctgacagtaggc
agagaggttgcaaacagagtatcaaaggtcagtcccacccctgggtgcatccgggcgtta
atgaagatgttgtactgcccttactgcagaggacttcccactgtgaaaccttgcaacaac
tattgcctcaatgtaatgaagggctgcctagcaaatcaggctgatttggatactgagtgg
aatctgttcatagatgctatgcttctggtagcggagagattagagggaccattcaacatt
gaatcagtcatggatcctattgatgtcaagatttctgaagccatcatgaacatgcaagaa
aacagcatgcaggtgtcggcaaaggttttccaaggatgtggccaacctaaaccagcacct
gccctgagatcttcccgttctgtccctgaaaacttcaatactcggtttagaccatacaac
ccagaggagcgacctacaactgctgctggcacaagtttggataggctgaggactatctgg
aggacaatgcaacatggtgtaacagacattaaagaaaagctaaagctctctaaaaagttc
tggtcaacattaccctacacaatctgcaaggatgagcaagtgacagctggtccatcaatc
gaggaggactgctggaacggccacaccaaggcaagatacttgcctgagattatgaacgat
ggcttgaccaaccagatcaacaatccggaagtagatgtggacatcacaaggccagacact
ttcattcgacaacaaatcatggccttgcgtgtcatgacgaacaaactgaagaatgcgtac
aatggaaatgatgtcaacttccaggacacaagtgacgaaaccagtggctcgggcagcgga
agcggctgtacagatgacatctgtcccactgagttcgattttgtcacaactgaagcacca
tcagtcgactccgacaggagggaggtggaggcttcagccacgcagcctggctggtcactg
cagacgttgcttattatcttcattagttttgtactgcagagacagtggagataa
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