Cuculus canorus (common cuckoo): 104054884
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Entry
104054884 CDS
T08597
Symbol
MID1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104054884 (MID1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cuca04121
]
104054884 (MID1)
Enzymes [BR:
cuca01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104054884 (MID1)
Ubiquitin system [BR:
cuca04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
104054884 (MID1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
PRY
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
zf-C3HC4_3
zf-RING_2
zf-RING_5
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
104054884
NCBI-ProteinID:
XP_053933388
LinkDB
All DBs
Position
1:complement(76592245..76846658)
Genome browser
AA seq
667 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNEPVESITAFQCPTCR
YVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDSNSMSSCEKVLCQ
FCDQDPAQEAVKTCVTCEVSYCEECLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHED
EKVNMYCVTDDQLICALCKLVGRHRDHQVAALSERYDKLKQNLESNLTNLIKRNTELETL
LAKLIQTCQHVEVNASRQETKLMEECDQLIEIIQQRRQIIGTKIKEGKVVRLRKLAQQIA
NCKQCIERSTSLISQAEQSLKENDHARFLQTAKNITERVSMATASSQVLIPEINLNDTFD
TFALDFTREKKLLECLDYLTAPNPPTIREELCTASYDTITVHWTSDDEFSVVSYELQYTI
FTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIFVVKAINQAGSRSSEPGKLK
TNSQPFKLDPKSAHRKLKVSHDNLTVERDETSSKKSHTPERFTSQGSYGVAGNVFIDSGR
HYWEVVISGSTWYAIGISYKSAPKHEWIGKNSASWVLCRCNNTWVVRHNSKEIPIEPAPH
LRRVGILLDYDNGSLAFYDALNSLHLYTFDITFGQPVCPTFTVWNKCLTIITGLPIPDHL
DSSEQLA
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcggaactgacctgccctatctgtctggagctgtttgaagacccg
ctgctgctgccttgcgctcacagcctctgcttcaactgcgcacaccgcatcctggtctcc
cactgcgccaccaacgagccggtggagtcaatcaccgccttccagtgcccgacgtgccgc
tatgtcatcaccctcagccagcgcggtctagacgggctcaagcgcaacgtcaccctgcag
aacatcattgacagatttcagaaagcctcggtcagcgggcccaattcccccagcgagacc
cgccgggagcgggcatttgatagcaacagcatgtcgtcctgtgagaaggtcctctgccag
ttctgcgaccaggaccctgcccaggaggccgtgaaaacctgtgttacctgcgaggtatcc
tactgcgaggagtgcctgaaagctactcaccccaacaagaagcctttcactggccaccgt
ctcatcgagcccatcccagactctcacatcaggggattaatgtgcttggagcatgaggac
gagaaagttaacatgtactgtgtgactgatgaccagttaatctgtgccttgtgtaaactg
gttgggcgacaccgtgaccatcaggtggcagctttaagtgagcgctatgacaagctaaag
caaaatttggaaagtaacctcaccaaccttattaagaggaatactgaactggaaactctt
ttggcgaaacttattcagacctgtcaacatgtagaagtaaatgcatcccgccaagaaacc
aagttgatggaagaatgtgaccagctcattgaaataattcagcaaagacgacaaataatt
ggaaccaaaatcaaggaaggaaaggtggtgaggttgagaaaactggctcagcagattgcg
aactgcaaacagtgcattgagcgctcaacatccctcatctctcaggctgaacagtcgctg
aaggagaacgatcacgctcgcttcctacagactgctaaaaatataactgaaagggtttct
atggcaactgcgtcctcccaggttctaattcctgaaattaatctcaatgatactttcgat
actttcgcacttgactttacccgggagaagaaattgttggaatgccttgactatcttaca
gctcccaacccacccaccattcgagaagagctctgtacagcttcttatgataccattact
gtccactggacatcggatgatgagttcagtgtggtctcttatgagctgcagtacaccatc
ttcaccggacaagctaatgttgttagtttatgcaactcagccgacagctggatgattgtt
cccaatatcaaacaaaaccactacacagtgcacgggttacagagtggcactaagtacatc
ttcgttgttaaggctattaatcaggccggcagcagaagcagcgaacctggcaagctcaaa
acaaacagtcagccgtttaaactggaccccaaatctgctcatagaaaattgaaagtgtct
catgataatttgacagtggaacgtgatgagacatcttccaagaagagtcacacaccagag
cgattcacaagccaagggagctatggagtagctggcaacgtgttcattgacagcgggcga
cattactgggaagtggttataagtgggagtacatggtatgccattggtatttcttataaa
tcagcaccgaagcatgagtggatcgggaagaattctgcctcctgggtgctttgtcgctgt
aataacacatgggtggtacggcacaacagcaaagaaatccccatagagcctgcacctcac
ctccgacgggttgggattttgctggactatgacaatggttcccttgctttttatgatgct
ttgaactccctacatctttacacttttgatattacatttggacagccggtgtgccccacg
ttcactgtgtggaataagtgtttgaccattataactggcttacctatccctgaccaccta
gactcctctgagcagctcgcatga
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