Cuculus canorus (common cuckoo): 104054973
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Entry
104054973 CDS
T08597
Symbol
DIS3
Name
(RefSeq) exosome complex exonuclease RRP44
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104054973 (DIS3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cuca03019
]
104054973 (DIS3)
Messenger RNA biogenesis [BR:
cuca03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
104054973 (DIS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
Rrp44_S1
CSD2
OB_HELZ2
Toxin_R_bind_C
Motif
Other DBs
NCBI-GeneID:
104054973
NCBI-ProteinID:
XP_053912914
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All DBs
Position
1:complement(42222245..42243569)
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AA seq
955 aa
AA seq
DB search
MLTSRSFLKRTRAGAVVKVVREHYLREDIPCGAAACRLCPTDRGLQARPSGAPSALCPGP
HYLLPDTNLLLHQIDILEDPVIKNVIVLQTVLQEVRNRSAPVYKRIRDVIQNPEKHFYSF
TNEHHRETYIEQQKGESSNDRNDRAIRVAVKWYNEHLKKIEDGEKIQVIFLTNDRANKEK
ALEEGITAYTCEEYIKSLTANPDLVDRLACVSDEGKEIESGKIIFPEHIPLSKLQQGIKS
GIYLQGTFRASRENYLEGTVWVHGDAEENKEIIIQGLKHLNRAVHEDVVAVELLAKDEWV
APSSVVLQDDGQNEDDVESEEEKENVLKASVNKDMLRPTGKVVGIIKRNWRPFCGMLSKS
QIKEARRHLFTPADRRIPRIRIETRQAETLEGQRIIVAIDGWPRNSRYPNGHFVKNLGNA
GDKETETEVLLLEHDVPHQPFSQSVLSFLPKMPWSITEQDMKYREDLRHLCVCSVDPPGC
TDIDDALHCRELENGNTEVGVHIADVSHFIRPGNALDEESAKRGTTVYLCEKRIDMVPEL
LSSNLCSLRSNVDRLAFSCIWEMNHKAEILKTRFTKSIINSKASLTYAEAQMRIDSATMN
DDITTSLRGLNKLAKILKKKRIDNGALTLSSPEVRFHMDSETHDPIDLQTKELKETNSMV
EEFMLLANVSVAQKIYDEFPEFALLRKHPAPPPSNYDILVKAAKSKNLEIKTDSAKALAE
SLDMAESPTFPYLNTLLRILATRCMMQAVYFCSGMDNDFHHYGLASPIYTHFTSPIRRYA
DIIVHRLLAVAIGADCTYPELTDKHKLADVCKNLNYRHKMAQYAQRASVAFHTQLFFKSK
GVVNEDAYILFVRKNAIVVLIPKYGLEGTVFFEEKDKPTPKLDYNNEVPSLTVEDTTLHV
FDKVKVNVMLDASNIQHQKIRMVLVEPKIPGTDGSATLSTETSSKNEPEKKKKKL
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgctgacctcgcgctcgttcctgaagcgcacgcgggcgggcgcggtggtgaaagtggtg
cgcgagcactacctgcgtgaggacatcccctgcggcgccgccgcctgccgcctctgcccc
actgaccgcggcctgcaggcgcggcccagcggcgcccccagcgccctctgccccgggccg
cactacctcctgcccgacaccaaccttctcctccaccagattgatattcttgaagatccc
gttattaagaatgtcattgtgctacagacagtcttacaagaagtcaggaatcggagtgca
ccagtgtacaagcgaattagggacgtgattcaaaaccctgaaaaacatttctattctttc
accaatgaacatcatagagaaacatacatagagcaacaaaaaggagaaagttctaatgac
cgcaatgacagagccattcgggtagcagtgaaatggtacaacgaacacttgaaaaaaata
gaggatggggagaagatccaagttatctttttaacaaacgacagagctaataaagagaaa
gctctagaggaagggataactgcttatacttgtgaggagtatataaaaagcttgacagct
aatcccgatcttgtagatcgtcttgcttgtgtatctgatgaagggaaagaaatagaaagt
ggaaaaataattttcccagaacatattcctcttagcaaactgcagcaaggaataaaatct
ggtatttacctccaaggaactttcagagcaagcagagagaattatcttgaaggtactgtt
tgggttcatggagatgctgaagaaaacaaagagataattatacagggactgaaacattta
aaccgagcagttcatgaagatgttgtagctgtggagttgctggcaaaagatgaatgggtc
gcaccatcctcagtggtcttgcaggatgatggccagaatgaagacgacgttgaaagtgaa
gaggagaaagaaaacgtgctgaaggcttctgttaacaaggacatgctgagacctacagga
aaagtggtgggcattataaaacgaaactggaggccgttttgtggcatgctttccaaatca
cagatcaaagaggcaaggcgccatttgtttacgccagctgatcgcagaattcctcgcatt
cgaatagaaacgagacaagcagaaacattggaaggacaaaggataattgttgctattgat
ggttggcccaggaattccagatatcctaatggtcattttgtaaagaacttgggaaatgct
ggagataaagagacagagacagaagttcttctgcttgaacatgatgttcctcatcagcct
ttttcacagagtgtccttagtttcctaccaaaaatgccatggagcattacagaacaggat
atgaaataccgggaagacttaaggcatctgtgtgtttgtagtgttgatcctcctggctgt
acggatattgatgatgcattacattgcagagaattagaaaatggaaatacagaggttggt
gtacatattgcggacgtcagccattttattcgcccgggaaatgctttggatgaggagtcg
gcaaaaagaggaacaacagtatatctctgtgaaaaaaggatcgatatggttccagagtta
cttagttccaatttatgctccctgagatctaatgtggacaggcttgcattttcgtgtata
tgggagatgaaccataaggctgaaattctaaaaacgagatttacgaaaagtattattaat
tccaaggcttctcttacctatgctgaagcacagatgagaattgattcagcaactatgaat
gatgatattactacaagcctacgtggactaaacaaattggcaaaaattctgaagaagaaa
agaattgataatggagccttgactctttcctcaccagaagttcgttttcacatggacagt
gaaactcatgatcctattgatctgcagactaaggagctcaaagaaacaaattcaatggtt
gaagagtttatgttgcttgcgaatgtctcagtagcacaaaaaatttatgatgagttccca
gagtttgccttgctcaggaaacatcctgctcctcccccgtcaaattatgacatccttgtg
aaagctgcgaagtccaagaatttggaaattaagacagattcagcaaaggctttagctgaa
tcattagacatggctgaatctcctacattcccctatctaaatacactgctgcgaattttg
gccactcgctgcatgatgcaagctgtttatttctgctctggaatggataatgattttcat
cactatggtttagcctcacctatttatacccactttacctcacccattagaaggtatgct
gacattattgtacatcgacttttggcagtggccataggagcagactgtacttacccagaa
cttacagataagcataaactagcagatgtatgtaaaaatctcaattaccgacataaaatg
gcccaatatgcacaaagagcatccgttgcattccatacacagctgttcttcaaaagcaaa
ggagtagtgaatgaagatgcgtatatattatttgtaagaaaaaatgcaattgtggttttg
attcccaagtatgggttagaaggaacagtcttctttgaagaaaaagataaaccaacacca
aaactggattacaacaatgaggtaccatcacttactgtggaagacacaacattgcatgta
tttgataaagttaaagtgaacgttatgttagatgcttccaacatccagcatcagaaaatt
cggatggtgttggtagaaccaaagataccgggaactgatggatctgcaactctgtctaca
gagacaagcagcaagaatgaaccagagaaaaagaaaaagaagctatga
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