Cuculus canorus (common cuckoo): 104055088
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Entry
104055088 CDS
T08597
Symbol
LIMA1
Name
(RefSeq) LIM domain and actin-binding protein 1 isoform X1
KO
K23026
LIM domain and actin-binding protein 1
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cuca04812
]
104055088 (LIMA1)
Cytoskeleton proteins [BR:
cuca04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
104055088 (LIMA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
104055088
NCBI-ProteinID:
XP_053907491
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All DBs
Position
29:1114700..1144822
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AA seq
751 aa
AA seq
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MEPAPFNRRQWTSQSLKITAKELSLVNKNKSSALMERFSKYQKAAEEATAEKKSTAETLP
PHFIRGNLSVLKKKWENPVLGTGAWKETQRSSCAEVGHKAGSSASSQDTEQSPEVSVPSG
TSVQLQCPARDSGKLRSRSPESGRMENGPREVEKPEVSENTDSSGKIEKYNIPLNKLKMM
FERGEATPSKQVPREQRKVAGSWRISENSLSSEDIDVGQGEKSHGASGHLVDTSPALSPE
KMETKRSLDMPRLAETSIKDRLAKYQAAVSKQGSSPGLTVVNEIQGSESELKHYRSEQKE
NVPPGPEDSVSHQHGEKGSAGENSLSSHSALLEDGNAGQNLENETEVQKPVSTKQQNFGS
KPIGQTDASLPKAVKKFQLPMKETCVGCQKTVYPMERLFANQQVFHISCFRCSYCNSKLS
LGTYASLRGNIYCKPHFNQLFKSKGNYDEGFGHKQHKELWTGKTECEESPEKTAHDVNAA
ESPQSPGVEDAPIAKVGVLAASMEAKASALPEREERPAETKKLRIAWPPPSDQSTQGSAL
DEGIKVLKPKWPPEEETSKTDPQEDVDLDLKKLRRSSSLKERSRPFTVAASFRTISVKGH
KAENSSSKAERDVLKRSEELEREAVVDKKQKERKSENRNFQSAEEKNVEEEQESSGSKTV
EHSFVENGQVNAETDEEEHAMEEQEMPNEEFLEPNSPKHSSVADVVTAKELSPNQNRKSQ
DVGFWEGEDMEDLSVEEQIKRNRYYEEDDEE
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggaacctgccccgtttaatagaagacaatggacttcacagtctttgaaaatcactgca
aaagagctatctctggtcaacaagaataaatcatcagctctcatggagaggttctccaag
tatcagaaagcggctgaagaggccactgctgagaaaaaaagtaccgcagaaactcttcct
ccccattttataaggggaaatctgagtgtgctaaagaagaagtgggagaatccagtgctg
ggaacaggggcttggaaggaaacgcaacgcagcagctgtgctgaggttgggcacaaagcc
ggtagctccgcttcatcccaggacacagagcagagcccagaggtcagcgtcccttcgggc
acctctgtccaactgcagtgtcccgcgagggacagcgggaagcttcgaagccgttcaccg
gagagtggcagaatggaaaacggtccaagagaggtggagaagcccgaagtcagcgagaac
acagactcttcggggaagattgagaaatacaacatcccgctaaacaagctcaagatgatg
tttgaaaggggcgaagccactccaagcaagcaggtccccagggagcagaggaaggtagca
ggcagctggaggatttctgaaaatagcctctcttcagaggacattgatgttggccaagga
gaaaagagccacggcgcatcaggacatcttgttgataccagtccagcgctcagcccagag
aagatggagaccaagagaagcttggacatgcctcgcttagcagaaacttcaataaaggac
aggctggcaaagtatcaagcagctgtgtccaagcagggcagctccccaggtctcaccgtc
gtgaatgagattcaaggcagcgagagtgaactcaagcattacagatctgagcagaaggag
aacgtgccaccaggtcctgaggattcagtttcccatcagcatggggagaagggttctgca
ggggagaacagcttgtcttcccactctgctcttctggaggatggcaatgctggacaaaac
ttggagaacgagacagaagttcagaaaccggtcagcacgaagcagcaaaactttggttct
aaaccaattgggcagacagacgcatctctgccaaaagcagtgaagaagtttcaattgccg
atgaaggaaacctgtgtggggtgtcagaagactgtgtacccgatggaaaggctctttgcc
aaccagcaggtgtttcacatcagctgtttccgctgctcctattgcaacagtaaactcagt
cttgggacatatgcatctctgcgaggaaatatttattgcaagcctcacttcaatcagctc
tttaaatctaaaggcaattacgatgaaggctttggacacaaacagcacaaggaattatgg
acaggcaaaactgaatgtgaagaatccccagagaaaactgcccatgatgtaaatgcagca
gaaagtccacaaagcccaggagtagaggatgctccaattgcaaaagtaggagttctggca
gcaagtatggaagcaaaggcttcagctttacctgaaagagaagagagaccggcagaaaca
aaaaagctcaggattgcctggccgcctccatctgaccaaagtacccaaggaagtgccttg
gatgagggcatcaaagtattgaaacccaaatggcctccggaagaagagacttccaagaca
gatccgcaggaggatgtggatctggatctcaaaaagctaagaagatcttcctcgctgaag
gaaagaagtcgtcccttcacagtagcagcctcatttagaacaatatctgttaaaggccat
aaagcagagaattcatcttctaaggcagagagagatgtgttgaaaagaagtgaggaactg
gagagagaggctgtggtagataaaaagcaaaaggaaaggaagtctgagaataggaacttc
caaagtgctgaagagaagaatgtagaggaagaacaggaatcatctggtagcaaaacagta
gagcacagctttgtagaaaatggccaggtaaatgccgagacagacgaggaagaacacgct
atggaagagcaggagatgccaaatgaagaattccttgaaccaaattctcctaaacattcc
agcgtagccgatgttgtgactgctaaggagttgtctcctaaccagaatcgcaaatcccag
gatgttggtttctgggagggtgaagatatggaagatctgtctgtggaagaacagatcaaa
aggaatcgttactatgaagaagatgatgaagaataa
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