Cuculus canorus (common cuckoo): 104055171
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Entry
104055171 CDS
T08597
Symbol
SNRPF
Name
(RefSeq) small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104055171 (SNRPF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cuca03019
]
104055171 (SNRPF)
03041 Spliceosome [BR:
cuca03041
]
104055171 (SNRPF)
03032 DNA replication proteins [BR:
cuca03032
]
104055171 (SNRPF)
Messenger RNA biogenesis [BR:
cuca03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
104055171 (SNRPF)
Spliceosome [BR:
cuca03041
]
Complex A
U1 snRNP components
Sm proteins
104055171 (SNRPF)
U2 snRNP components
104055171 (SNRPF)
Complex B
U1 snRNP components
104055171 (SNRPF)
U4/U6.U5 tri-snRNP components
104055171 (SNRPF)
Complex C
U2 snRNP components
104055171 (SNRPF)
DNA replication proteins [BR:
cuca03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
104055171 (SNRPF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
104055171
NCBI-ProteinID:
XP_009554560
LinkDB
All DBs
Position
1:169387604..169390958
Genome browser
AA seq
86 aa
AA seq
DB search
MSLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLG
EVLIRCNNVLYIRGVEEEEEDGEMRE
NT seq
261 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcccctcaaccccaagccgttcctgaacgggctgacggggaaaccggtgatg
gtgaagctgaagtgggggatggagtataagggctacctcgtctccgttgacggctacatg
aacatgcagcttgcgaacacagaggagtacatagacggtgcattgtctggacacctgggt
gaagttttgataaggtgcaataacgttttgtacatcagaggtgtggaagaagaggaagaa
gatggtgaaatgagagaatag
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