Cuculus canorus (common cuckoo): 104055230
Help
Entry
104055230 CDS
T08597
Symbol
PSIP1
Name
(RefSeq) PC4 and SFRS1-interacting protein isoform X1
KO
K25057
PC4 and SFRS1-interacting protein
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
104055230 (PSIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cuca03041
]
104055230 (PSIP1)
Spliceosome [BR:
cuca03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
104055230 (PSIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LEDGF
PWWP
L1R_F9L
DUF3916
Motif
Other DBs
NCBI-GeneID:
104055230
NCBI-ProteinID:
XP_009554627
LinkDB
All DBs
Position
Z:complement(23125264..23164120)
Genome browser
AA seq
576 aa
AA seq
DB search
MSRDFKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKMPIFFFGTHETAFLGPKDIFP
YSENKDKYGKPNKRKGFNEGLWEIDNNPKVKFSHQQSHPAINTPIKETVQEGRQEPAEGS
EEKAGAKRRKSSIPKLSPKGDNNLPTEAETEEKEMDTSKEDDLTSEKNSKEDTVKTNEVS
IPKVARRGRKRKAEKQAEAEEAAAVATAAVAAAAPVPVSPKVSPKRGRPAASEVKVPKPR
GRPKLVKPPCPSESDCVNEEEKAKKKGTEEKPKKQGKKDEDSQKEEEKSKKEFDKKEGKK
EAEPKRKNAAKVGSASASDSEDDEEQEGDKKKKGGRNFQMAHRRNIVRGQHDREVTERKR
KQEEHAESELQSKEEGKKTEVKKMEKKRETSMDSRLQRIHAEIKNSLKIDNLDVNRCIEA
LDELASLQVTMQQAQKHTEMILTLKKIRKFKVSQVIMEKSTMLYNKFKTMFLVGEGDSVL
SQVLNKSLAEQKQHEEANKTKEQWKKGTNKKIEKEKDQTNSKVLNGGSEAQDNNQSQHNG
ENTEEKDKHEAGVKKKICGEERELEKSAKDSAFESK
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgagccgagatttcaagcccggggacctgatcttcgccaagatgaagggttatccccac
tggcccgccagggtggatgaagttcctgatggagcagtaaagcctcctacaaataaaatg
cctattttcttttttggcacccatgagacggcatttttgggaccaaaggacatatttcct
tactctgaaaataaagataaatatggcaaaccaaataagagaaagggatttaatgaaggg
ttgtgggaaatcgacaacaatcctaaagtgaagttctctcatcagcagtcccatccagcc
attaacactcctatcaaagaaactgttcaagaaggcagacaggagcctgctgaggggagt
gaagaaaaagcaggagccaaaagaagaaagtcatctatcccaaaattatcccccaaaggg
gataataacttacccacagaagctgaaacagaagaaaaggagatggacacctcaaaggaa
gatgatctgacttctgagaaaaacagcaaagaagatacggtgaaaacaaatgaggtttct
attcctaaagttgctagaagaggaagaaaaagaaaggctgaaaaacaagcagaagctgaa
gaagcagcagcagtggcaacagcagcagtggcagcagcagctcctgtaccagtgtctccg
aaagtaagccccaaaagaggaagaccagcagcttctgaagtaaaagttccaaaaccaaga
gggagacccaagttggtgaaaccaccttgtccttcagagagtgactgtgttaatgaggag
gaaaaggcaaagaaaaaaggaacagaagaaaagcctaaaaagcaggggaaaaaagatgag
gatagtcagaaggaagaggagaaatcaaagaaggaatttgacaaaaaggaaggcaagaag
gaggctgaaccaaaaaggaaaaatgctgcaaaagtgggttctgcatcagcttctgattct
gaagatgatgaagaacaagaaggtgacaagaagaaaaaagggggaagaaactttcaaatg
gctcatagaagaaacattgtaagaggccaacatgacagagaagtaacagaaagaaagcgt
aagcaagaggagcacgcagaatctgaattgcagagtaaagaagaaggcaagaaaacagaa
gttaagaagatggagaagaagagagaaacatcaatggattctaggcttcaaaggatacat
gcagaaattaagaactccctgaaaattgataatcttgatgtgaacagatgtattgaggct
cttgatgagcttgcatcccttcaagtcacaatgcaacaagctcagaaacatacagagatg
attctgactctaaagaagatacggaagttcaaagttagccaagttatcatggagaaatct
acaatgctatataacaagttcaagaccatgtttctggttggggaaggagattctgttctt
tcccaagtactaaataaatcacttgctgagcagaagcagcatgaggaagccaacaaaacc
aaagaacagtggaagaaaggaacaaacaaaaaaatagagaaggaaaaggatcaaacaaat
tcaaaggttctgaatggaggatctgaagctcaagacaacaaccagtcacaacacaatgga
gagaacactgaagaaaaagataagcatgaagctggcgttaagaaaaagatctgtggtgaa
gagagagagcttgaaaagtcagcaaaagattcggcctttgaaagcaaatga
DBGET
integrated database retrieval system
