Cuculus canorus (common cuckoo): 104055248
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Entry
104055248 CDS
T08597
Symbol
MYO5A
Name
(RefSeq) LOW QUALITY PROTEIN: unconventional myosin-Va
KO
K10357
myosin V
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
104055248 (MYO5A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cuca03019
]
104055248 (MYO5A)
04131 Membrane trafficking [BR:
cuca04131
]
104055248 (MYO5A)
03029 Mitochondrial biogenesis [BR:
cuca03029
]
104055248 (MYO5A)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cuca04812
]
104055248 (MYO5A)
Messenger RNA biogenesis [BR:
cuca03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
104055248 (MYO5A)
mRNA cycle factors
P-body specific factors
104055248 (MYO5A)
Membrane trafficking [BR:
cuca04131
]
Others
Actin-binding proteins
Myosins
104055248 (MYO5A)
Mitochondrial biogenesis [BR:
cuca03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
104055248 (MYO5A)
Cytoskeleton proteins [BR:
cuca04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
104055248 (MYO5A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Csm1_N
HTH_17
AAA_16
Myosin_N
AAA_22
Motif
Other DBs
NCBI-GeneID:
104055248
NCBI-ProteinID:
XP_009554651
LinkDB
All DBs
Position
Unknown
AA seq
1863 aa
AA seq
DB search
MEIEPVLPGKETPTASESAENLCYKRYGMEKDGLDCMFVQYARVWIPDPEEVWKSAELLK
DYKPGDKVLQLRLEEGKDIEFCLDPKTKELPPLRNPDILVGENDLTALSYLHEPAVLHNL
KVRFIDSKLIYTYCGIVLVAINPYEQLPIYGEDIINAYSGQNMGDMDPHIFAVAEEAYKQ
MARDERNQSIIVSGESGAGKTVSAKYAMRYFATVSGSASEANVEEKVLASNPIMESIGNA
KTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLEKSRVVFQAEEERNYHIFYQLCASA
ALPEFKTLRLGNANYFHYTKQGGSPVIDGVDDAKEMVNTRQACTLLGISDSYQMGIFRIL
AGILHLGNVEFASRDSDSCTVPPKHEPLTVFCDLMGVEYEEMAHWLCHRKLATATETYIK
PISKLHAINARDALAKHIYANLFNWIVDHVNKALHATVKQHSFIGVLDIYGFETFEINSF
EQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTLIDFYDNQPCINLIEAKMGILDLL
DEECKMPKGSDDTWAQKLYNTHLNKCALFEKPRLSNKAFIIKHFADKVEYQCEGFLEKNK
DTVYEEQIKVLKSSKKFKLLPELFQDEEKVLSPTSATPSGRVPLSRTAVKPAKARPGQAS
KEHKKTVGHQFRNSLHLLMETLNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLE
TIRISAAGFPSRWTYQEFFSRYRVLMKQRDVLSDRKQTCKNVLEKLILDKDKYQFGKTKI
FFRAGQVAYLEKIRADKLRAACIRIQKTIRGWLMRKKYVRMRKAAITVQRYVRGYQARCY
AKFLRRTRAAITIQKFQRMYVVRKRYQCMRAATIALQALLRGYVARNKYQMMLREHKSTI
IQKHVRGWLARVHYRRTLKAIVYLQCCYRRMMAKRELKKLKIEARSVERYKKLHIGLENK
IMQLQRKIDEQNKEYKSLLEKLSNLEITYSTETEKLRNDVERLRMSEEEAKNATNRVISL
QEEIAKLRKELHQTQTEKKTIEEWADKYKHETEQLVSELKEQNTLLKSEKEELNRTRRIH
DQAREITEMMEKKLVEETKQLELDLNDERLRYQNLLNEFSRLEERYDDLKDEMNLIVSIP
KPGHKRTDSTHSSNESEYTFSSEITEAEDLPLRMEEPSEKKAPLDMSLFLKLQKRVTELE
QEKQSLQDELDRKEEQQALRAKAKEEERPPIRGAELEYESLKRQELESENKKLKNELNEL
QKALTETRAPEVTAPGAPAYRVLLDQLTSVSEELEVRKEEVLILRSQLVSQKEAIQPKED
KNTMTDSTILLEDVQKMKDKGEIAQAYIGLKETNRLLESQLQSQKKSHENELESLRGEIQ
SLKEENNHQQQLLAQNLQLPPEARIEASLQHEITRLTNENLDLMEQLEKQDKTVRKLKKQ
LKVFAKKIGELEVGQMENISPGQIIDEPIRPVNIPRKEKDFQGMLEYKKEDEQKLVKNLI
LELKPRGVAVNLIPGLPAYILFMCVRHADYLNDDQKVRSLLTSTINGIKKVLKKRGDDFE
TVSFWLSNTCRFLHCLKQYSGEEGFMKHNTPRQNEHCLTNFDLAEYRQVLSDLAIQIYQQ
LVRVLENILQPMIVSGMLEHETIQGVSGVKPTGLRKRTSSIADEGTYTLDSIIRQLNSFH
SVMCQHGMDPELIKQVVKQMFYIIGAVTLNNLLLRKDMCSWSKGMQIRYNVSQLEEWLRD
KNLMNSGAKETLEPLIQAAQLLQVKKKTDEDAEAICSMCNALTTAQIVKVLNLYTPVNEF
EERVLVSFIRTIQMRLRDRMDSPQLLMDAKHIFPVTFPFNPSSLALETIQIPASLGLGFI
SRV
NT seq
5592 nt
NT seq
+upstream
nt +downstream
nt
atggagattgagcctgttttgcctgggaaggaaactccaactgcgtctgaaagtgctgaa
aatctgtgttacaagagatatggaatggaaaaagatggtttagactgtatgtttgtccaa
tatgccagggtttggatccctgatccagaagaggtgtggaagtcagcagaacttctcaaa
gattataaacctggagataaagtcctccagcttcgacttgaagagggcaaggacatagaa
ttttgcctagatccgaagacgaaggaactcccacccttgcgaaaccctgacatacttgtt
ggtgaaaatgacctcacagcgctcagttatctccatgaaccagctgttttacacaacctg
aaagttcgatttatagactctaaactaatctatacctattgtggtatcgttttagtggcc
ataaatccttacgaacaactgcctatctatggcgaagatatcatcaatgcatacagtggc
caaaatatgggggatatggatccccatatctttgcggtggcggaagaagcgtataagcag
atggcgagagatgagcgaaatcagtcaatcattgtcagtggggaatctggagccggaaag
accgtctctgctaagtatgccatgaggtactttgccacggtcagcggatctgccagtgaa
gccaatgttgaggagaaagtcttggcctctaaccccatcatggagtctattggaaatgcc
aaaactacaaggaatgacaacagcagtcgctttggtaaatacattgaaattggttttgat
aagaggtatcgaatcattggtgctaacatgagaacttacctcttggaaaaatcaagagtg
gtgtttcaggcagaagaggagagaaattaccacatcttttaccaactatgtgcctctgca
gcattacccgagtttaaaactttacgattagggaatgcaaattactttcactatacaaag
caaggtggaagccctgtgattgacggtgtcgatgatgccaaggaaatggtaaacaccagg
caggcctgcactttgctagggattagtgattcctaccagatggggatttttcgaatcctt
gctggaatccttcacttgggcaacgtggagtttgcatctcgggattctgacagctgcact
gttcctcccaagcatgaacccctcaccgtcttctgtgacctcatgggcgtggagtatgaa
gagatggcccactggctttgccataggaagctcgcaactgccaccgaaacctatatcaag
ccaatttctaaacttcatgctatcaatgccagagatgcgcttgccaaacatatctatgct
aatctctttaactggattgtagatcatgtgaacaaagctcttcacgctactgtaaaacag
cattctttcattggagtgttggacatttatggatttgagacattcgaaatcaacagcttt
gaacagttctgtatcaactatgccaatgaaaaactgcagcagcagttcaatatgcatgtc
tttaagctggaacaagaagaatatatgaaggaacaaataccatggaccttgattgatttc
tatgacaatcagccttgcatcaaccttatagaggccaaaatgggaattctggatctgttg
gatgaggagtgcaagatgccaaaaggttcggatgacacttgggctcaaaaactgtacaat
actcatttgaataaatgtgccctctttgaaaaaccacgtttgtcaaataaggcttttatc
atcaagcactttgctgacaaggtggaatatcaatgtgaaggctttctggaaaagaataaa
gacacagtttatgaagaacaaattaaggtcctaaaatcaagtaagaagtttaagctgcta
ccagagttattccaggatgaggagaaggtcctcagccccacgtcagcaactccttcaggg
cgcgtgcctttgtctcgaacagctgtaaaacctgccaaggccaggccaggtcaggccagc
aaggagcataagaaaactgtggggcatcagtttcgaaattctcttcatctgctgatggaa
accctgaacgctacaactccacactatgtgcgctgtattaagcctaacgacttcaagttt
ccattcacattcgatgaaaagcgtgcagtgcagcagctgagagcttgtggcgtcctggag
accatccgaatcagtgcagctggcttcccttccaggtggacataccaagagttcttcagc
cgttatcgtgttctaatgaagcagagagatgtccttagtgaccgaaagcagacgtgcaaa
aatgtcctggagaagctgattctggacaaggataagtaccagtttggtaagacaaaaata
tttttccgggctggtcaagtagcctatctggaaaaaataagggcagataagttgagagct
gcctgtatccgcatccaaaagacaatccgaggctggctgatgcgaaagaagtacgtgcgt
atgaggaaggctgccatcaccgttcagagatatgtcagagggtaccaagcacgatgctat
gccaagttcctgcgaagaacgcgggctgccatcactattcagaagttccagcgcatgtat
gtggtccgcaaacgataccaatgcatgcgagctgctactattgctcttcaggctctctta
agaggttacgtggccaggaacaagtaccaaatgatgcttcgggagcacaagtctacgatt
attcagaaacatgtcagaggttggctggctcgagtgcactaccgcaggaccttgaaggcc
attgtttacttacaatgctgttaccgacgcatgatggccaagagggagctgaagaaactg
aagatagaagcccgttctgtagaacgctataagaagcttcacattggcttggagaacaag
atcatgcagctgcagcgaaaaattgatgagcagaacaaagagtataaatctctgctggag
aagctgagcaacctggagatcacgtacagtacggagacagagaaactgcggaatgatgtg
gaaaggcttcgaatgagtgaggaggaggctaagaatgcaaccaaccgtgtcatcagcctt
caggaggagattgccaagctccggaaggagctgcaccaaactcagactgagaagaagacc
attgaggagtgggcagacaaatacaaacatgaaaccgagcagctggtgtcagagttgaaa
gagcagaacacattactgaaatctgaaaaggaggagctgaaccgaacccgccgtatccat
gaccaagcgagggaaataacagagatgatggaaaagaagctagtggaggaaacgaaacag
ctagagctagatctgaatgatgaacggttacgataccagaacctgctgaatgagttcagc
cgattagaggagcggtatgatgatctaaaggatgaaatgaacttaatagtgagcatcccc
aagcctggacacaaaagaacggattcgactcacagtagcaatgaatctgaatacactttt
agctctgagatcacagaagcagaagacttaccattgaggatggaggaaccaagtgagaaa
aaggcaccattggatatgtctctgttcctcaagctgcagaaacgggttacagagctggaa
caagaaaagcaatccctgcaggatgaactggacagaaaggaagaacaacaggctctccgt
gccaaagctaaggaggaagaaaggcctccaataagaggtgcagagctggagtacgagtcg
ctcaagcgtcaagaacttgaatctgagaataaaaaactgaagaatgagttgaatgagctg
cagaaagccctcacagaaacacgagcgccagaggtaactgctcctggtgctcctgcatat
agagtcctcctggatcagctgacttcagtaagtgaagagcttgaggtacgcaaggaagaa
gtcctcatcctgagatctcagcttgttagccagaaagaggctattcaacccaaggaggat
aagaataccatgacagattctacaatcctcctggaggacgtgcagaagatgaaagacaaa
ggagaaatagcccaggcctatattggactgaaggaaacaaacaggctgctggagtctcag
cttcagtcacagaagaagagccacgagaatgaactggaatcgctgcgaggcgagatccaa
agtctgaaggaagaaaacaatcaccagcagcagctcctagcccagaatctgcagctgcct
ccagaggctcgcattgaagccagtctacagcatgagatcacccggctgacaaatgagaac
ttggatttaatggagcagcttgaaaagcaagacaaaactgttcgcaagttaaagaagcaa
ttgaaagtatttgctaagaagattggtgaacttgaagtgggccagatggagaacatatca
cctggacaaatcattgacgaacctattcgtccagttaatattccacggaaggaaaaggac
ttccaagggatgttagaatataagaaggaggatgaacaaaaacttgtcaagaatcttatt
ttagagctgaaaccacgtggggtagctgtcaatctgattccaggactaccagcatatatt
ttgttcatgtgtgtacgccatgcagattaccttaatgatgaccaaaaagtgcggtcgttg
ttgacttccactatcaatggcatcaaaaaagtattgaagaaaagaggtgatgactttgaa
acagtgtccttctggctatctaacacctgccgatttttgcactgtttgaagcaatatagt
ggagaagaggggtttatgaagcataatacacctcgtcaaaatgaacactgcctcactaat
ttcgatttagctgaatacagacaggtactgagtgacttggctattcagatctaccaacaa
cttgtccgagtgttggaaaacattctgcaaccaatgatcgtttcaggaatgctggagcat
gagactatccaaggtgtctcaggggtgaaaccaacaggcctacggaagagaacatccagc
attgctgatgaaggaacctacactttggactccattattcggcagctgaactctttccat
tcagtgatgtgtcagcacggaatggatccagagctgatcaaacaggtcgtcaagcagatg
ttctacatcattggggctgtaacgcttaataatcttctcctgcgcaaggacatgtgctca
tggagcaaaggaatgcagataagatacaatgtgagtcaactggaagaatggctacgtgat
aaaaatctcatgaacagtggggctaaagaaacactggaacccctcatccaggctgctcag
ttattgcaagtaaaaaagaaaacggatgaagatgcagaagccatttgttcaatgtgcaat
gcactgactactgctcagattgtaaaagttctgaatttgtatactccggttaatgagttt
gaagagagagtcttggtatcatttatacgtacaatacagatgcgtctgcgagacaggatg
gactctcctcagttgctcatggatgctaaacacatcttccctgttacttttccatttaat
ccatcctctctggcattagaaaccatccagattccagccagcttgggcttgggcttcata
tcacgtgtctga
DBGET
integrated database retrieval system
