Cuculus canorus (common cuckoo): 104055248
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Entry
104055248 CDS
T08597
Symbol
MYO5A
Name
(RefSeq) unconventional myosin-Va
KO
K10357
myosin V
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
104055248 (MYO5A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cuca03019
]
104055248 (MYO5A)
04131 Membrane trafficking [BR:
cuca04131
]
104055248 (MYO5A)
03029 Mitochondrial biogenesis [BR:
cuca03029
]
104055248 (MYO5A)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cuca04812
]
104055248 (MYO5A)
Messenger RNA biogenesis [BR:
cuca03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
104055248 (MYO5A)
mRNA cycle factors
P-body specific factors
104055248 (MYO5A)
Membrane trafficking [BR:
cuca04131
]
Others
Actin-binding proteins
Myosins
104055248 (MYO5A)
Mitochondrial biogenesis [BR:
cuca03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
104055248 (MYO5A)
Cytoskeleton proteins [BR:
cuca04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
104055248 (MYO5A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
HTH_17
AAA_16
Myosin_N
AAA_22
MC7
NPHP3_N
Talin_IBS2B
Motif
Other DBs
NCBI-GeneID:
104055248
NCBI-ProteinID:
XP_053933357
LinkDB
All DBs
Position
12:3269032..3378656
Genome browser
AA seq
1879 aa
AA seq
DB search
MAASELYTKYARVWIPDPEEVWKSAELLKDYKPGDKVLQLRLEEGKDIEFCLDPKTKELP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLPIYG
EDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF
ATVSGSASEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMR
TYLLEKSRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFHYTKQGGSPVIDGVD
DAKEMVNTRQACTLLGISDSYQMGIFRILAGILHLGNVEFASRDSDSCTVPPKHEPLTVF
CDLMGVEYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVN
KALHATVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKE
QIPWTLIDFYDNQPCINLIEAKMGILDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEK
PRLSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKFKLLPELFQDEEKVLS
PTSATPSGRVPLSRTAVKPAKARPGQASKEHKKTVGHQFRNSLHLLMETLNATTPHYVRC
IKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQRDVL
SDRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAACIRIQKTIRGW
LMRKKYVRMRKAAITVQRYVRGYQARCYAKFLRRTRAAITIQKFQRMYVVRKRYQCMRAA
TIALQALLRGYMARNKYQMMLREHKSTIIQKHVRGWLARVHYRRTLKAIVYLQCCYRRMM
AKRELKKLKIEARSVERYKKLHIGLENKIMQLQRKIDEQNKEYKSLLEKLSNLEITYSTE
TEKLRNDVERLRMSEEEAKNATNRVISLQEEIAKLRKELHQTQTEKKTIEEWADKYKHET
EQLVSELKEQNTLLKTEKEELNRRIHDQAREITETMEKKLVEETKQLELDLNDERLRYQN
LLNEFSRLEERYDDLKDEMNLIVSIPKPGHKRTDSTHSSNESEYTFSSEITEAEDLPLRM
EQEPSEKKAPLDMSLFLKLQKRVTELEQEKQSLQDELDRKEEQQALRAKAKEEERPPIRG
AELEYESLKRQELESENKKLKNELNELQKALTETRAPEVTAPGAPAYRVLLDQLTSVSEE
LEVRKEEVLILRSQLVSQKEAIQPKNTMTDSTILLEDVQKMKDKGEIAQAYIGLKETNRQ
SPQDYHVLNEDGELWLVYEGLKQANRLLESQLQSQKKSHENELESLRGEIQSLKEENNHQ
QQLLAQNLQLPPEARIEASLQHEITRLTNENLFCEELYADDPKKYQSYRISLYKRMIDLM
EQLEKQDKTVRKLKKQLKVFAKKIGELEVGQMENISPGQIIDEPIRPVNIPRKEKDFQGM
LEYKKEDEQKLVKNLILELKPRGVAVNLIPGLPAYILFMCVRHADYLNDDQKVRSLLTST
INGIKKVLKKRGDDFETVSFWLSNTCRFLHCLKQYSGEEGFMKHNTPRQNEHCLTNFDLA
EYRQVLSDLAIQIYQQLVRVLENILQPMIVSGMLEHETIQGVSGVKPTGLRKRTSSIADE
GTYTLDSIIRQLNSFHSVMCQHGMDPELIKQVVKQMFYIIGAVTLNNLLLRKDMCSWSKG
MQIRYNVSQLEEWLRDKNLMNSGAKETLEPLIQAAQLLQVKKKTDEDAEAICSMCNALTT
AQIVKVLNLYTPVNEFEERVLVSFIRTIQMRLRDRMDSPQLLMDAKHIFPVTFPFNPSSL
ALETIQIPASLGLGFISRV
NT seq
5640 nt
NT seq
+upstream
nt +downstream
nt
atggccgcctccgagctctacaccaagtatgccagggtttggatccctgatccagaagag
gtgtggaagtcagcagaacttctcaaagattataaacctggagataaagtcctccagctt
cgacttgaggagggcaaggacatagaattttgcctagatccgaagacgaaggaactccca
cccttgcgaaaccctgacatacttgttggtgaaaatgacctcacagcgctcagttatctc
catgaaccagctgttttacacaacctgaaagttcgatttatagactctaaactaatctat
acctattgtggtatcgttttagtggccataaatccttatgaacaactgcctatctatggc
gaagatatcatcaatgcatacagtggccaaaatatgggggatatggatccccatatcttt
gcggtggcggaagaagcgtataagcagatggcgagagatgagcgaaatcagtcaatcatt
gtcagtggagaatctggagccggaaagaccgtctctgctaagtatgccatgaggtacttt
gccacggtcagcggatctgccagtgaagccaatgttgaagagaaagtcttggcctctaac
cccatcatggagtctattggaaatgccaaaactacaaggaatgacaacagcagtcgcttt
ggtaaatacattgaaattggttttgataagaggtatcgaatcattggtgctaacatgaga
acttacctcttggaaaaatcaagagtggtgtttcaggcagaagaggagagaaattaccac
atcttttaccaactatgtgcctctgcagcattacccgagtttaaaactttacgattaggg
aatgcaaattactttcactatacaaagcaaggtggaagccctgtgattgacggtgtcgat
gatgccaaggaaatggtaaacaccaggcaggcctgcactttgctagggattagtgattcc
taccagatggggatttttcgaatccttgctggaatccttcacttgggcaacgtggagttt
gcatctcgggattctgacagctgcactgttcctcccaagcatgaacccctcaccgtcttc
tgtgacctcatgggcgtggagtatgaagagatggcccactggctttgccataggaagctc
gcaactgccaccgaaacctatatcaagccaatttctaaacttcatgctatcaatgccaga
gatgcgcttgccaaacatatctatgctaatctctttaactggattgtagatcatgtgaac
aaagctcttcacgctactgtaaaacagcattctttcattggagtgttggacatttatgga
tttgagacattcgaaatcaacagctttgaacagttctgtatcaactatgccaatgaaaaa
ctgcagcagcagttcaatatgcatgtctttaagctggaacaagaagaatatatgaaggaa
caaataccatggaccttgattgatttctatgacaatcagccttgcatcaaccttatagag
gccaaaatgggaattctggatctgttggatgaggagtgcaagatgccaaaaggttcggat
gacacttgggctcaaaaactgtacaatactcatttgaataaatgtgccctctttgaaaaa
ccacgtttgtcaaataaggcttttatcatcaagcactttgctgacaaggtggaatatcaa
tgtgaaggctttctggaaaagaataaagacacagtttatgaagaacaaattaaggtccta
aaatcaagtaagtttaagctgctaccagagttattccaggatgaggagaaggtcctcagc
cccacgtcagcaactccttcagggcgcgtgcctttgtctcgaacagctgtaaaacctgct
aaggccaggccaggtcaggccagcaaggagcataagaaaactgtggggcatcagtttcga
aattctcttcatctgctgatggaaaccctgaacgctacaactccacactatgtgcgctgt
attaagcctaacgacttcaagtttccattcacattcgatgaaaagcgcgcagtgcagcag
ctgagagcttgtggcgtcctggagaccatccgaatcagtgcagctggcttcccttccagg
tggacataccaagagttcttcagccgttatcgtgttctaatgaagcagagagatgtcctt
agtgaccgaaagcagacgtgcaaaaatgtcctggagaagctgattctggacaaggataag
taccagtttggtaagacaaaaatatttttccgggctggtcaagtagcctatctggaaaaa
ataagggcagataagttgagagctgcctgtatccgcatccaaaagacaatccgaggctgg
ctgatgcgaaagaagtacgtgcgtatgaggaaggctgccatcaccgttcagagatatgtc
agagggtaccaagcacgatgctatgccaagttcctgcgaagaacgcgggctgccatcact
attcagaagttccagcgcatgtatgtggtccgcaaacgataccaatgcatgcgagctgct
actattgctcttcaggctctcttaagaggttacatggccaggaacaagtaccaaatgatg
cttcgggagcacaagtctacgattattcagaaacatgtcagaggttggctggctcgagtg
cactaccgcaggaccttgaaggccattgtttacttacaatgctgttaccgacgcatgatg
gccaagagggagctgaagaaactgaagatagaagcccgttctgtagaacgctataagaag
cttcacattggcttggagaacaagatcatgcagctgcagcgaaaaattgatgagcagaac
aaagagtataaatctctgctggagaagctgagcaacctggagatcacgtacagtacggag
acagagaaactgcggaatgatgtggaaaggcttcgaatgagtgaggaggaggctaagaat
gcaaccaaccgagtcatcagccttcaggaggagattgccaagctccggaaggagctgcac
caaactcagactgagaagaagaccattgaggagtgggcagacaaatacaaacatgaaacc
gagcagctggtgtcagagttgaaagagcagaacacattactgaaaaccgaaaaggaggag
ctgaaccgccgtatccatgaccaagcgagggaaataacagagacgatggaaaagaagcta
gtggaggaaacgaaacagctagagctagatctgaatgatgaacggttacgataccagaac
ctgctgaatgagttcagccgattagaggagcggtatgatgatctaaaggatgaaatgaac
ttaatagtgagcatccccaagcctggtcacaaaagaacggattcgactcacagtagcaat
gaatctgaatacacttttagctctgagatcacagaagcagaagacttaccattgaggatg
gagcaggaaccaagtgagaaaaaggcaccattggatatgtctctgttcctcaagctgcag
aaacgggttacagagctggaacaagaaaagcaatccctgcaggatgaactggacagaaag
gaagaacaacaggctctccgtgccaaagctaaggaggaagaaaggcctccaataagaggt
gcagagctggagtacgagtcgctcaagcgtcaagaacttgaatctgagaataaaaaactg
aagaatgagttgaatgagctgcagaaagccctcacagaaacacgagcgccagaggtaact
gctcctggtgctcctgcatatagagtcctcctggatcaactgacttcagtaagtgaagag
cttgaggtacgcaaggaagaagtcctcatcctgagatctcagcttgttagccagaaagag
gctattcaacccaagaataccatgacagattctacaatcctcctggaggacgtgcagaag
atgaaagacaaaggagaaatagcccaggcctatattggactgaaggaaacaaacaggcaa
tctcctcaggactatcatgtgctgaatgaggacggagaactttggctggtttatgaaggg
ttaaaacaagccaacaggctgctggagtctcagcttcagtcacagaagaagagccacgag
aatgaactggaatcgctgcgaggcgagatccaaagtctgaaggaagaaaacaatcaccag
cagcagctcctagcccagaatctgcaactgcctccagaggctcgcattgaagccagtcta
cagcatgagatcacccggctgacaaatgagaacttgttttgtgaggagttgtatgcagat
gatcccaagaagtatcagtcgtaccggatttcactttacaaacggatgattgatttaatg
gagcagcttgaaaagcaagacaaaactgttcgcaagttaaagaagcaattgaaagtattt
gctaagaagattggtgaacttgaagtgggccagatggagaacatatcacctggacaaatc
attgacgaacctattcgtccagttaatattccacggaaggaaaaggacttccaagggatg
ttagaatataagaaggaggatgaacaaaaacttgtcaagaatcttattttagagctgaaa
ccacgtggagtagctgtcaatctgattccaggactaccagcatatattttgttcatgtgt
gtacgccatgcagattaccttaatgatgaccaaaaagtgcggtcgttgttgacttccact
atcaatggcatcaaaaaagtattgaagaaaagaggtgatgactttgaaacagtgtccttc
tggctatctaacacctgccgatttttgcactgtttgaagcaatatagtggagaagagggg
tttatgaagcataatacacctcgtcaaaatgaacactgcctcactaatttcgatttagct
gaatacagacaggtactgagtgacttggctattcagatctaccaacaacttgtccgagtg
ttggaaaacattctgcaaccaatgatcgtttcaggaatgctggagcatgagactatccaa
ggtgtctcaggggtgaaaccaacaggcctacggaagagaacatccagcattgctgatgaa
ggaacctacactttggactccattattcggcagctgaactctttccattcagtgatgtgt
cagcacggaatggatccagagctgatcaaacaggtcgtcaagcagatgttctacatcatt
ggggctgtaacgcttaataatcttctcctgcgcaaggacatgtgctcatggagcaaagga
atgcagataagatacaatgtgagtcaactggaagaatggctacgtgataaaaatctgatg
aacagtggggctaaagaaacactggaacccctcatccaggctgctcagttattgcaagta
aaaaagaaaacggatgaagatgcagaagccatttgttcaatgtgcaatgcactgactact
gctcagattgtaaaagttctgaatttgtatactccggttaatgagtttgaagagagagtc
ttggtatcatttatacgtacaatacagatgcgtctgcgagacaggatggactctcctcag
ttgctcatggatgctaaacacatcttccctgttacttttccatttaatccatcctctctg
gcattagaaaccattcagatcccagccagcttgggcttgggcttcatatcacgtgtctga
DBGET
integrated database retrieval system
